bridgehead/ccp/modules/cbioportal-compose.yml

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2023-11-29 10:29:30 +01:00
version: '3.7'
services:
cbioportal:
#image: docker.verbis.dkfz.de/ccp/dktk-cbioportal:latest
image: dktk-cbioportal
container_name: bridgehead-cbioportal
environment:
generate_password: ${MYSQL_PASSWORD}
depends_on:
- cbioportal-database
- cbioportal-session
labels:
- "traefik.enable=true"
- "traefik.http.routers.cbioportal.rule=PathPrefix(`/cbioportal`)"
- "traefik.http.services.cbioportal.loadbalancer.server.port=8080"
- "traefik.http.routers.cbioportal.tls=true"
- "traefik.http.routers.cbioportal-update.rule=PathPrefix(`/cbioportal-update`)"
- "traefik.http.services.cbioportal-update.loadbalancer.server.port=8001"
- "traefik.http.routers.cbioportal-update.tls=true"
cbioportal-database:
image: mysql:5.7
container_name: bridgehead-cbioportal-database
environment:
MYSQL_DATABASE: cbioportal
MYSQL_USER: cbio_user
generate_password: ${MYSQL_PASSWORD}
generate_root_password: ${MYSQL_ROOT_PASSWORD}
volumes:
# TODO: Move sql files to image. Are they really necessary?
- ./cbioportal-cgds.sql:/docker-entrypoint-initdb.d/cgds.sql:ro
- ./cbioportal-seed.sql.gz:/docker-entrypoint-initdb.d/seed.sql.gz:ro
- /var/cache/bridgehead/ccp/cbioportal_mysql_data:/var/lib/mysql
cbioportal-session:
image: cbioportal/session-service:0.6.1
container_name: bridgehead-cbioportal-session
environment:
SERVER_PORT: 5000
JAVA_OPTS: -Dspring.data.mongodb.uri=mongodb://cbioportal-session-database:27017/session-service
depends_on:
- cbioportal-session-database
cbioportal-session-database:
image: mongo:4.2
container_name: bridgehead-cbioportal-session-database
environment:
MONGO_INITDB_DATABASE: session_service
volumes:
- /var/cache/bridgehead/ccp/cbioportal_mongo_data:/data/db
volumes:
cbioportal_mysql_data:
cbioportal_mongo_data: