bridgehead/lib/functions.sh

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#!/bin/bash -e
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detectCompose() {
if [[ "$(docker compose version 2>/dev/null)" == *"Docker Compose version"* ]]; then
COMPOSE="docker compose"
else
COMPOSE="docker-compose"
# This is intended to fail on startup in the next prereq check.
fi
}
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getLdmPassword() {
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if [ -n "$LDM_PASSWORD" ]; then
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docker run --rm docker.verbis.dkfz.de/cache/httpd:alpine htpasswd -nb $PROJECT $LDM_PASSWORD | tr -d '\n' | tr -d '\r'
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else
echo -n ""
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fi
}
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exitIfNotRoot() {
if [ "$EUID" -ne 0 ]; then
log "ERROR" "Please run as root"
fail_and_report 1 "Please run as root"
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fi
}
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checkOwner(){
COUNT=$(find $1 ! -user $2 |wc -l)
if [ $COUNT -gt 0 ]; then
log ERROR "$COUNT files in $1 are not owned by user $2. Run find $1 ! -user $2 to see them, chown -R $2 $1 to correct this issue."
return 1
fi
return 0
}
printUsage() {
echo "Usage: bridgehead start|stop|is-running|update|install|uninstall|enroll PROJECTNAME"
echo "PROJECTNAME should be one of ccp|bbmri"
}
checkRequirements() {
if ! lib/prerequisites.sh $@; then
log "ERROR" "Validating Prerequisites failed, please fix the error(s) above this line."
fail_and_report 1 "Validating prerequisites failed."
else
return 0
fi
}
fetchVarsFromVault() {
[ -e /etc/bridgehead/vault.conf ] && source /etc/bridgehead/vault.conf
if [ -z "$BW_MASTERPASS" ] || [ -z "$BW_CLIENTID" ] || [ -z "$BW_CLIENTSECRET" ]; then
log "ERROR" "Please supply correct credentials in /etc/bridgehead/vault.conf."
return 1
fi
set +e
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PASS=$(BW_MASTERPASS="$BW_MASTERPASS" BW_CLIENTID="$BW_CLIENTID" BW_CLIENTSECRET="$BW_CLIENTSECRET" docker run --rm -e BW_MASTERPASS -e BW_CLIENTID -e BW_CLIENTSECRET -e http_proxy samply/bridgehead-vaultfetcher $@)
RET=$?
if [ $RET -ne 0 ]; then
echo "Code: $RET"
echo $PASS
return $RET
fi
eval $(echo -e "$PASS" | sed 's/\r//g')
set -e
return 0
}
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fetchVarsFromVaultByFile() {
VARS_TO_FETCH=""
for line in $(cat $@); do
if [[ $line =~ .*=[\"]*\<VAULT\>[\"]*.* ]]; then
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VARS_TO_FETCH+="$(echo -n $line | sed 's/=.*//') "
fi
done
if [ -z "$VARS_TO_FETCH" ]; then
return 0
fi
log INFO "Fetching $(echo $VARS_TO_FETCH | wc -w) secrets from Vault ..."
fetchVarsFromVault $VARS_TO_FETCH
return 0
}
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assertVarsNotEmpty() {
MISSING_VARS=""
for VAR in $@; do
if [ -z "${!VAR}" ]; then
MISSING_VARS+="$VAR "
fi
done
if [ -n "$MISSING_VARS" ]; then
log "ERROR" "Mandatory variables not defined: $MISSING_VARS"
return 1
fi
return 0
}
fixPermissions() {
CHOWN=$(which chown)
sudo $CHOWN -R bridgehead /etc/bridgehead /srv/docker/bridgehead
}
source lib/monitoring.sh
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report_error() {
CODE=$1
shift
log ERROR "$@"
hc_send $CODE "$@"
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}
fail_and_report() {
report_error $@
exit $1
}
setHostname() {
if [ -z "$HOST" ]; then
export HOST=$(hostname -f | tr "[:upper:]" "[:lower:]")
log DEBUG "Using auto-detected hostname $HOST."
fi
}
# Takes 1) The Backup Directory Path 2) The name of the Service to be backuped
# Creates 3 Backups: 1) For the past seven days 2) For the current month and 3) for each calendar week
createEncryptedPostgresBackup(){
docker exec "$2" bash -c 'pg_dump -U $POSTGRES_USER $POSTGRES_DB --format=p --no-owner --no-privileges' | \
# TODO: Encrypt using /etc/bridgehead/pki/${SITE_ID}.priv.pem | \
tee "$1/$2/$(date +Last-%A).sql" | \
tee "$1/$2/$(date +%Y-%m).sql" > \
"$1/$2/$(date +%Y-KW%V).sql"
}
# from: https://gist.github.com/sj26/88e1c6584397bb7c13bd11108a579746
# ex. use: retry 5 /bin/false
function retry {
local retries=$1
shift
local count=0
until "$@"; do
exit=$?
wait=$((2 ** $count))
count=$(($count + 1))
if [ $count -lt $retries ]; then
echo "Retry $count/$retries exited with code $exit, retrying in $wait seconds..."
sleep $wait
else
echo "Retry $count/$retries exited with code $exit, giving up."
return $exit
fi
done
return 0
}
function bk_is_running {
detectCompose
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RUNNING="$($COMPOSE -p $PROJECT -f minimal/docker-compose.yml -f ./$PROJECT/docker-compose.yml $OVERRIDE ps -q)"
NUMBEROFRUNNING=$(echo "$RUNNING" | wc -l)
if [ $NUMBEROFRUNNING -ge 2 ]; then
return 0
else
return 1
fi
}
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##Setting Network properties
# currently not needed
#export HOSTIP=$(MSYS_NO_PATHCONV=1 docker run --rm --add-host=host.docker.internal:host-gateway ubuntu cat /etc/hosts | grep 'host.docker.internal' | awk '{print $1}');