samply/bridgehead
1
0
Fork 0
mirror of https://github.com/samply/bridgehead.git synced 2026-08-15 02:50:42 +02:00
Code Issues Packages Projects Releases Wiki Activity

Add Ovis to the CCP modules in the bridgehead (#375)

Browse Source 
This is a squash of 62 commits integrating ovis into the Bridgehead; authors see below.

---------

Co-authored-by: janskiba <jan.skiba@dkfz-heidelberg.de>
Co-authored-by: Torben Brenner <76154651+torbrenner@users.noreply.github.com>
Co-authored-by: Tobias Kussel <tobias.kussel@dkfz-heidelberg.de>
Co-authored-by: Torben Brenner <t.brenner@dkfz-heidelberg.de>
Co-authored-by: Martin Lablans <m.lablans@dkfz-heidelberg.de>
This commit is contained in:
tm16-medma
2026-08-13 18:18:52 +02:00
committed by GitHub
co-authored by janskiba Torben Brenner Tobias Kussel Torben Brenner Martin Lablans
parent 65f8edcef7
commit 1b4a290216
6 changed files with 131 additions and 0 deletions
Download Patch File Download Diff File Expand all files Collapse all files
README.md
+14
View File
@@ -457,6 +457,20 @@ If these variables are not set, the Data Quality Agent will still run and genera
Reports are accessible at `https://<your-host>/bbmri-data-quality-agent` (default credentials are admin:admin, please change it after first login!!).
[Official documentation](https://fdqf.bbmri-eric.eu/user/deployment.html)
### OVis (CCP only)
OVis visualizes your tumor documentation data at `https://<your-host>/ccp-ovis`. Set in your `ccp.conf`:
```bash
ENABLE_OVIS=true
OVIS_SUPERADMIN_EMAILS=admin@your-site.de
```
Users authenticate centrally with their CCP account (membership in your site's CCP group required), while their permissions are defined inside OVis -- so no duplicate user accounts are needed. The addresses in `OVIS_SUPERADMIN_EMAILS` become super admins and can grant roles to everyone else.
Data is imported on first start into `/var/cache/bridgehead/ccp/ovis-mongodb`. Deleting that directory also resets all OVis permissions.
## Things you should know
### Auto-Updates