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https://github.com/samply/bridgehead.git
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feat: migrate to new dnpm:dip node (#251)
* feat: migrate to new dnpm:dip node * hardcode dnpm connector type to broker * use `SITE_NAME` for dnpm `LOCAL_SITE` * host central targets in git * dnpm: add goettingen to central targets * dnpm: add uksh to central targets * dnpm: replace named volumes with fs volumes * chore: change dnpm images * chore: pin mysql * dnpm: Secure endpoints for ETL and p2p communications (#254) * fix authup redirect (#262) When a OIDC provider is configured, you'll get redirected to authup by Keycloak which redirects you to the DNPM:DIP. Currently the url looks like this: https://myserver/authup//someurl and produces an error. Manually removing the additional / fixes the issue. * Whitespace formatting --------- Co-authored-by: Niklas <niklas@ytvwld.de> Co-authored-by: Niklas Reimer <niklas@backbord.net> Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
This commit is contained in:
@ -13,7 +13,7 @@ services:
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PROXY_APIKEY: ${DNPM_BEAM_SECRET_SHORT}
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APP_ID: dnpm-connect.${PROXY_ID}
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DISCOVERY_URL: "./conf/central_targets.json"
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LOCAL_TARGETS_FILE: "./conf/connect_targets.json"
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LOCAL_TARGETS_FILE: "/conf/connect_targets.json"
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HTTP_PROXY: "http://forward_proxy:3128"
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HTTPS_PROXY: "http://forward_proxy:3128"
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NO_PROXY: beam-proxy,dnpm-backend,host.docker.internal${DNPM_ADDITIONAL_NO_PROXY}
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@ -25,7 +25,7 @@ services:
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volumes:
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- /etc/bridgehead/trusted-ca-certs:/conf/trusted-ca-certs:ro
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- /etc/bridgehead/dnpm/local_targets.json:/conf/connect_targets.json:ro
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- /etc/bridgehead/dnpm/central_targets.json:/conf/central_targets.json:ro
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- /srv/docker/bridgehead/minimal/modules/dnpm-central-targets.json:/conf/central_targets.json:ro
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labels:
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- "traefik.enable=true"
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- "traefik.http.routers.dnpm-connect.rule=PathPrefix(`/dnpm-connect`)"
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@ -1,34 +1,99 @@
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version: "3.7"
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services:
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dnpm-backend:
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image: ghcr.io/kohlbacherlab/bwhc-backend:1.0-snapshot-broker-connector
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container_name: bridgehead-dnpm-backend
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dnpm-mysql:
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image: mysql:9
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healthcheck:
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test: [ "CMD", "mysqladmin" ,"ping", "-h", "localhost" ]
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interval: 3s
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timeout: 5s
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retries: 5
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environment:
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- ZPM_SITE=${ZPM_SITE}
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- N_RANDOM_FILES=${DNPM_SYNTH_NUM}
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MYSQL_ROOT_HOST: "%"
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MYSQL_ROOT_PASSWORD: ${DNPM_MYSQL_ROOT_PASSWORD}
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volumes:
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- /etc/bridgehead/dnpm:/bwhc_config:ro
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- ${DNPM_DATA_DIR}:/bwhc_data
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labels:
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- "traefik.enable=true"
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- "traefik.http.routers.bwhc-backend.rule=PathPrefix(`/bwhc`)"
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- "traefik.http.services.bwhc-backend.loadbalancer.server.port=9000"
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- "traefik.http.routers.bwhc-backend.tls=true"
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- /var/cache/bridgehead/dnpm/mysql:/var/lib/mysql
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dnpm-frontend:
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image: ghcr.io/kohlbacherlab/bwhc-frontend:2209
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container_name: bridgehead-dnpm-frontend
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links:
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- dnpm-backend
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dnpm-authup:
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image: authup/authup:latest
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container_name: bridgehead-dnpm-authup
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volumes:
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- /var/cache/bridgehead/dnpm/authup:/usr/src/app/writable
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depends_on:
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dnpm-mysql:
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condition: service_healthy
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command: server/core start
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environment:
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- NUXT_HOST=0.0.0.0
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- NUXT_PORT=8080
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- BACKEND_PROTOCOL=https
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- BACKEND_HOSTNAME=$HOST
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- BACKEND_PORT=443
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- PUBLIC_URL=https://${HOST}/auth/
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- AUTHORIZE_REDIRECT_URL=https://${HOST}
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- ROBOT_ADMIN_ENABLED=true
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- ROBOT_ADMIN_SECRET=${DNPM_AUTHUP_SECRET}
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- ROBOT_ADMIN_SECRET_RESET=true
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- DB_TYPE=mysql
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- DB_HOST=dnpm-mysql
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- DB_USERNAME=root
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- DB_PASSWORD=${DNPM_MYSQL_ROOT_PASSWORD}
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- DB_DATABASE=auth
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labels:
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- "traefik.enable=true"
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- "traefik.http.routers.bwhc-frontend.rule=PathPrefix(`/`)"
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- "traefik.http.services.bwhc-frontend.loadbalancer.server.port=8080"
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- "traefik.http.routers.bwhc-frontend.tls=true"
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- "traefik.http.middlewares.authup-strip.stripprefix.prefixes=/auth"
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- "traefik.http.routers.dnpm-auth.middlewares=authup-strip"
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- "traefik.http.routers.dnpm-auth.rule=PathPrefix(`/auth`)"
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- "traefik.http.services.dnpm-auth.loadbalancer.server.port=3000"
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- "traefik.http.routers.dnpm-auth.tls=true"
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dnpm-portal:
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image: ghcr.io/dnpm-dip/portal:latest
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container_name: bridgehead-dnpm-portal
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environment:
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- NUXT_API_URL=http://dnpm-backend:9000/
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- NUXT_PUBLIC_API_URL=https://${HOST}/api/
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- NUXT_AUTHUP_URL=http://dnpm-authup:3000/
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- NUXT_PUBLIC_AUTHUP_URL=https://${HOST}/auth/
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labels:
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- "traefik.enable=true"
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- "traefik.http.routers.dnpm-frontend.rule=PathPrefix(`/`)"
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- "traefik.http.services.dnpm-frontend.loadbalancer.server.port=3000"
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- "traefik.http.routers.dnpm-frontend.tls=true"
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dnpm-backend:
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container_name: bridgehead-dnpm-backend
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image: ghcr.io/dnpm-dip/backend:latest
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environment:
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- LOCAL_SITE=${ZPM_SITE}:${SITE_NAME} # Format: {Site-ID}:{Site-name}, e.g. UKT:Tübingen
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- RD_RANDOM_DATA=${DNPM_SYNTH_NUM:--1}
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- MTB_RANDOM_DATA=${DNPM_SYNTH_NUM:--1}
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- HATEOAS_HOST=https://${HOST}
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- CONNECTOR_TYPE=broker
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- AUTHUP_URL=robot://system:${DNPM_AUTHUP_SECRET}@http://dnpm-authup:3000
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volumes:
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- /etc/bridgehead/dnpm/config:/dnpm_config
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- /var/cache/bridgehead/dnpm/backend-data:/dnpm_data
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depends_on:
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dnpm-authup:
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condition: service_healthy
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labels:
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- "traefik.enable=true"
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- "traefik.http.services.dnpm-backend.loadbalancer.server.port=9000"
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# expose everything
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- "traefik.http.routers.dnpm-backend.rule=PathPrefix(`/api`)"
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- "traefik.http.routers.dnpm-backend.tls=true"
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- "traefik.http.routers.dnpm-backend.service=dnpm-backend"
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# except ETL
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- "traefik.http.routers.dnpm-backend-etl.rule=PathRegexp(`^/api(/.*)?etl(/.*)?$`)"
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- "traefik.http.routers.dnpm-backend-etl.tls=true"
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- "traefik.http.routers.dnpm-backend-etl.service=dnpm-backend"
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# this needs an ETL processor with support for basic auth
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- "traefik.http.routers.dnpm-backend-etl.middlewares=auth"
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# except peer-to-peer
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- "traefik.http.routers.dnpm-backend-peer.rule=PathRegexp(`^/api(/.*)?/peer2peer(/.*)?$`)"
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- "traefik.http.routers.dnpm-backend-peer.tls=true"
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- "traefik.http.routers.dnpm-backend-peer.service=dnpm-backend"
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- "traefik.http.routers.dnpm-backend-peer.middlewares=dnpm-backend-peer"
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# this effectively denies all requests
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# this is okay, because requests from peers don't go through Traefik
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- "traefik.http.middlewares.dnpm-backend-peer.ipWhiteList.sourceRange=0.0.0.0/32"
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landing:
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labels:
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- "traefik.http.routers.landing.rule=PathPrefix(`/landing`)"
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@ -1,28 +1,16 @@
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#!/bin/bash
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if [ -n "${ENABLE_DNPM_NODE}" ]; then
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log INFO "DNPM setup detected (BwHC Node) -- will start BwHC node."
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log INFO "DNPM setup detected -- will start DNPM:DIP node."
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OVERRIDE+=" -f ./$PROJECT/modules/dnpm-node-compose.yml"
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# Set variables required for BwHC Node. ZPM_SITE is assumed to be set in /etc/bridgehead/<project>.conf
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DNPM_APPLICATION_SECRET="$(echo \"This is a salt string to generate one consistent password for DNPM. It is not required to be secret.\" | sha1sum | openssl pkeyutl -sign -inkey /etc/bridgehead/pki/${SITE_ID}.priv.pem | base64 | head -c 30)"
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if [ -z "${ZPM_SITE+x}" ]; then
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log ERROR "Mandatory variable ZPM_SITE not defined!"
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exit 1
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fi
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if [ -z "${DNPM_DATA_DIR+x}" ]; then
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log ERROR "Mandatory variable DNPM_DATA_DIR not defined!"
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exit 1
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fi
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DNPM_SYNTH_NUM=${DNPM_SYNTH_NUM:-0}
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if grep -q 'traefik.http.routers.landing.rule=PathPrefix(`/landing`)' /srv/docker/bridgehead/minimal/docker-compose.override.yml 2>/dev/null; then
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echo "Override of landing page url already in place"
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else
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echo "Adding override of landing page url"
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if [ -f /srv/docker/bridgehead/minimal/docker-compose.override.yml ]; then
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echo -e ' landing:\n labels:\n - "traefik.http.routers.landing.rule=PathPrefix(`/landing`)"' >> /srv/docker/bridgehead/minimal/docker-compose.override.yml
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else
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echo -e 'version: "3.7"\nservices:\n landing:\n labels:\n - "traefik.http.routers.landing.rule=PathPrefix(`/landing`)"' >> /srv/docker/bridgehead/minimal/docker-compose.override.yml
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fi
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fi
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mkdir -p /var/cache/bridgehead/dnpm/ || fail_and_report 1 "Failed to create '/var/cache/bridgehead/dnpm/'. Please run sudo './bridgehead install $PROJECT' again to fix the permissions."
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DNPM_SYNTH_NUM=${DNPM_SYNTH_NUM:--1}
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DNPM_MYSQL_ROOT_PASSWORD="$(generate_simple_password 'dnpm mysql')"
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DNPM_AUTHUP_SECRET="$(generate_simple_password 'dnpm authup')"
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fi
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