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@ -1,12 +1,11 @@
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version: "3.7"
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services:
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############################################ DataSHIELD Client (Rocker R-Studio)
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rstudio:
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container_name: bridgehead-rstudio
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image: docker.verbis.dkfz.de/ccp/dktk-rstudio:latest
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environment:
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#DEFAULT_USER: "rstudio" # Please, don't remove this line. It is informative.
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#DEFAULT_USER: "rstudio" # This line is kept for informational purposes
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PASSWORD: "${LDM_AUTH}"
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HTTP_RELATIVE_PATH: "/rstudio"
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labels:
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@ -16,11 +15,7 @@ services:
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- "traefik.http.routers.rstudio_ccp.tls=true"
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- "traefik.http.middlewares.rstudio_ccp_strip.stripprefix.prefixes=/rstudio"
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- "traefik.http.routers.rstudio_ccp.middlewares=rstudio_ccp_strip"
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#volumes:
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#- "bridgehead-rstudio-config:/home/rstudio/.config/rstudio"
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#- "bridgehead-rstudio-workspace:/home/rstudio/workspace"
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############################################ DataSHIELD Server (Opal)
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opal:
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container_name: bridgehead-opal
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image: docker.verbis.dkfz.de/ccp/dktk-opal:latest
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@ -34,7 +29,7 @@ services:
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- opal-db
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environment:
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JAVA_OPTS: "-Xms1G -Xmx8G -XX:+UseG1GC"
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# OPAL_ADMINISTRATOR_USER: "administrator" # Please, don't remove this line. It is informative.
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# OPAL_ADMINISTRATOR_USER: "administrator" # This line is kept for informational purposes
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OPAL_ADMINISTRATOR_PASSWORD: "${LDM_AUTH}"
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POSTGRESDATA_HOST: "opal-db"
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POSTGRESDATA_DATABASE: "opal"
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@ -49,19 +44,13 @@ services:
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- opal-cert.pem
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- opal-key.pem
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# volumes:
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# - "bridgehead-opal:/srv"
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opal-db: # Data
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opal-db:
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container_name: bridgehead-opal-db
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image: docker.verbis.dkfz.de/cache/postgres:15.1-alpine
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environment:
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POSTGRES_PASSWORD: "${OPAL_DB_PASSWORD}" # Set in datashield-setup.sh
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POSTGRES_USER: "opal"
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POSTGRES_DB: "opal"
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# Please evaluate if this volume makes sense. An import can take several hours. If the bridgehead is restarted,
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# the data should be reimported again.
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volumes:
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- "/var/cache/bridgehead/opal-db:/var/lib/postgresql/data"
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@ -90,16 +79,6 @@ services:
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environment:
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APP_datashield-connect_KEY: ${DATASHIELD_CONNECT_SECRET}
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#volumes:
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# bridgehead-rstudio-config:
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# name: "bridgehead-rstudio-config"
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# bridgehead-rstudio-workspace:
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# name: "bridgehead-rstudio-workspace"
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# bridgehead-opal-db:
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# name: "bridgehead-opal-db"
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# bridgehead-opal:
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# name: "bridgehead-opal"
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secrets:
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opal-cert.pem:
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file: /tmp/bridgehead/opal-cert.pem
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