diff --git a/itcc/docker-compose.yml b/itcc/docker-compose.yml index 18adb6f..23d879b 100644 --- a/itcc/docker-compose.yml +++ b/itcc/docker-compose.yml @@ -34,6 +34,7 @@ services: EPSILON: 0.28 QUERIES_TO_CACHE: '/queries_to_cache.conf' ENDPOINT_TYPE: ${FOCUS_ENDPOINT_TYPE:-blaze} + RUST_LOG: trace volumes: - /srv/docker/bridgehead/itcc/queries_to_cache.conf:/queries_to_cache.conf:ro depends_on: diff --git a/itcc/modules/itcc-omics-ingest.yaml b/itcc/modules/itcc-omics-ingest.yaml index cbb5b95..974a995 100644 --- a/itcc/modules/itcc-omics-ingest.yaml +++ b/itcc/modules/itcc-omics-ingest.yaml @@ -1,15 +1,16 @@ services: omics-endpoint: build: . - image: samply/itcc-omics-ingest:workflow + image: ghcr.io/samply/itcc-omics-ingest:workflow ports: - - "8080:8040" + - "6080:6080" environment: - UPLOAD_DIR=/data/uploads + - RUST_LOG=trace volumes: - ./uploads:/data/uploads labels: - - "traefik.http.routers.omics.rule=Host(`${HOST}`) && PathPrefix(`/omics`)" + - "traefik.http.routers.omics.rule=Host(`${HOST}`) && PathPrefix(`/api`)" - "traefik.enable=true" - - "traefik.http.services.omics.loadbalancer.server.port=8040" + - "traefik.http.services.omics.loadbalancer.server.port=6080" - "traefik.http.routers.omics.tls=true" diff --git a/itcc/vars b/itcc/vars index 3eee652..662703e 100644 --- a/itcc/vars +++ b/itcc/vars @@ -7,6 +7,7 @@ SUPPORT_EMAIL=arturo.macias@dkfz-heidelberg.de PRIVATEKEYFILENAME=/etc/bridgehead/pki/${SITE_ID}.priv.pem BROKER_URL_FOR_PREREQ=$BROKER_URL PUBLIC_ENVIRONMENT=prod +SITES=itcc-inform,itcc-ither,itcc-mappyacts,itcc-profyle,itcc-smpaeds,itcc-zero for module in $PROJECT/modules/*.sh do