mirror of
https://github.com/samply/bridgehead.git
synced 2025-06-17 04:50:15 +02:00
dktk-fed
This commit is contained in:
Patrick Skowronek
12
lib/functions.sh
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lib/functions.sh
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#!/bin/bash -e
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exitIfNotRoot() {
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if [ "$EUID" -ne 0 ]; then
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echo "Please run as root"
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exit 1
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fi
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}
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log() {
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echo "$(date +'%Y-%m-%d %T')" "$1:" "$2"
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}
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lib/generate.sh
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lib/generate.sh
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#!/bin/bash
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cat > ../landing/index.html <<EOL
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<html lang="en">
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<head>
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<meta charset="utf-8">
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<meta name="viewport" content="width=device-width, initial-scale=1">
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<meta name="description" content="">
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<title>Bridgehead Overview</title>
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<!-- Bootstrap core CSS -->
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<link href="https://cdn.jsdelivr.net/npm/bootstrap@5.1.3/dist/css/bootstrap.min.css" rel="stylesheet"
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integrity="sha384-1BmE4kWBq78iYhFldvKuhfTAU6auU8tT94WrHftjDbrCEXSU1oBoqyl2QvZ6jIW3" crossorigin="anonymous">
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<script src="https://cdn.jsdelivr.net/npm/bootstrap@5.1.3/dist/js/bootstrap.bundle.min.js"
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integrity="sha384-ka7Sk0Gln4gmtz2MlQnikT1wXgYsOg+OMhuP+IlRH9sENBO0LRn5q+8nbTov4+1p"
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crossorigin="anonymous"></script>
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</head>
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<body>
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<nav class="navbar navbar-light" style="background-color: #aad7f6;">
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<h2 class="pb-2 border-bottom">Bridgehead ${site_name}</h2>
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</nav>
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<div class="container px-4 py-5" id="featured-3">
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<div>
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<h2>Components</h2>
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<h3>Central</h3>
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<table class="table">
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<thead class="thead-dark">
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<tr>
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<th style="width: 50%">Group</th>
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<th style="width: 50%">Service</th>
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</tr>
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</thead>
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<tbody>
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<tr>
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<td>CCP-IT</td>
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<td><a href="https://patientlist.ccp-it.dktk.dkfz.de">Zentrale Patientenliste</td>
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</tr>
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<tr>
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<td>CCP-IT</td>
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<td><a href="https://decentralsearch.ccp-it.dktk.dkfz.de">Dezentrale Suche</td>
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</tr>
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<tr>
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<td>CCP-IT</td>
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<td><a href="https://centralsearch.ccp-it.dktk.dkfz.de">Zentrale Suche</td>
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</tr>
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<tr>
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<td>CCP-IT</td>
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<td><a href="https://deployment.ccp-it.dktk.dkfz.de">Deployment-Server</td>
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</tr>
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<tr>
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<td>CCP-IT</td>
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<td><a href="https://dktk-kne.kgu.de">Zentraler Kontrollnummernerzeuger</td>
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</tr>
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</tbody>
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</table>
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</div>
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<div>
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<h3>Local</h3>
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<table class="table">
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<thead class="thead-dark">
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<tr>
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<th style="width: 50%">Project</th>
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<th style="width: 50%">Services</th>
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</tr>
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</thead>
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<tbody>
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<tr>
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<td>Bridgehead</td>
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<td>Reverse Proxy <a href="http://e260-serv-05:8080/">Traefik</a></td>
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</tr>
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<tr>
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<td>DKTK</td>
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<td><a href="http://e260-serv-05/dktk-localdatamanagement/fhir/">Blaze</a></td>
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</tr>
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</tbody>
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</table>
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</div>
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<footer class="footer mt-auto py-3 ">
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<a href="https://dktk.dkfz.de/"><img src="https://www.oncoray.de/fileadmin/files/bilder_gruppen/DKTK/Logo_DKTK_neu_2016.jpg" height="10%" width="30%"></a> DKTK 2022
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</footer>
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</body>
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</html>
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EOL
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54
lib/prerequisites.sh
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lib/prerequisites.sh
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#!/bin/bash
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## Check if user is a su
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echo "Welcome to the starting a bridgehead. We will get your instance up and running in no time"
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echo "First we will check if all prerequisites are met ..."
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prerequisites="git docker docker-compose cat"
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for prerequisite in $prerequisites; do
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$prerequisite --version 2>&1
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is_available=$?
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if [ $is_available -gt 0 ]; then
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log "ERROR" "Prerequisite not fulfilled - $prerequisite is not available!"
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exit 79
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fi
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# TODO: Check for specific version
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done
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echo "Checking site.conf"
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#check if site.conf is created
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if [ ! -f site.conf ]; then
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echo "Please create your specific site.conf file from the site.dev.conf"
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exit
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fi
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#Load site specific variables
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source site.conf
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if [ -z "$site_name" ]; then
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echo "Please set site_name"
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fi
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echo "Checking site-config module"
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## Download submodule
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if [ ! -d "site-config" ]; then
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echo "Please set up the site-config folder. Instruction are in the readme."
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exit
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else
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echo "Site configuration is already loaded"
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fi
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#Check if a project is selected
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if [ -z "$project" ]; then
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echo "No project selected! Please add a Project in your local site.conf."
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exit
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fi
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#check if project env is present
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if [ -d "site-config/${project}.env" ]; then
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echo "Please copy the tempalte from ${project} and put it in the site-config folder"
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fi
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echo "All prerequisites are met!"
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10
lib/systemd/bridgehead-update@.service
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10
lib/systemd/bridgehead-update@.service
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[Unit]
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Description=Bridgehead (%i) Update Service
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[Service]
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Type=oneshot
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WorkingDirectory=/srv/docker/bridgehead/
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ExecStart=/bin/bash -c "/srv/docker/bridgehead/update-bridgehead.sh %i"
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[Install]
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WantedBy=multi-user.target
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8
lib/systemd/bridgehead-update@.timer
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8
lib/systemd/bridgehead-update@.timer
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[Unit]
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Description=Nightly Updates of Bridgehead (%i)
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[Timer]
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OnCalendar=*-*-* 03:00:00
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[Install]
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WantedBy=basic.target
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15
lib/systemd/bridgehead@.service
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15
lib/systemd/bridgehead@.service
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[Unit]
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Description=Bridgehead (%i) Service
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[Service]
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Restart=always
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RestartSec=30
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WorkingDirectory=/srv/docker/bridgehead/
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ExecStartPre=/bin/bash -c '`which docker-compose` -f %i/docker-compose.yml --env-file site-config/%i.env down'
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ExecStart=/bin/bash -c '`which docker-compose` -f %i/docker-compose.yml --env-file site-config/%i.env up'
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ExecStop=/bin/bash -c '`which docker-compose` -f %i/docker-compose.yml --env-file site-config/%i.env down'
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[Install]
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WantedBy=multi-user.target
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