Compare commits

..

20 Commits

Author SHA1 Message Date
2c79799815 Pin the landing page to a version known to work 2024-08-29 15:05:39 +02:00
ca93451357 Added ECDC Beam Broker site to list of Firewall exceptions 2024-07-26 09:49:13 +02:00
892e2c2cf1 Removed misleading text from stop.sh
This command no longer disables the Bridgehead in systemctl, it
only stops it.
2024-07-18 12:56:42 +02:00
520c560be0 Got systemctl restart to work locally
There were problems on my Ubuntu VM with the target run level that I was
using, so I went for the default. Now, if I restart my VM, the Bridgehead
is successfully started automatically.

Also added some status-generating commands to the run.sh and stop.sh
scripts, so that it looks like they are doing something.
2024-07-18 12:31:42 +02:00
bb81617873 Replaced tabs with spaces 2024-07-17 09:34:46 +02:00
c27536b566 Cherry picked from ehds2 and updated data upload for new scripts 2024-07-16 16:47:57 +02:00
f213e6909a Started adding the new scripts to the README 2024-07-16 16:17:30 +02:00
6887264a5b Added infrastructure for running ECDC-Bridgehead under systemctl
This comprises of the service file to be copied into the systemctl directory,
plus Bridgehead start and stop scripts for both systemctl and for the
administrator on the command line.
2024-07-16 16:08:08 +02:00
5b2c3d7725 Using bridgehead user for performing git pull
Otherwise problems can arise with authentication.
2024-07-16 16:06:10 +02:00
a8a15aaad8 Update repos on start
When Bridgehead is started, make sure that all repositories are up to
date first.
2024-07-12 09:04:08 +02:00
2e8b1dc96c Deal with multiple data files
The original TransFAIR logic was only able to handle a single CSV file
and broke if there were more. This commit fixes that.
2024-07-12 08:45:17 +02:00
105495d6cd Made compatible with ehds2 branch 2024-07-10 14:51:16 +02:00
93e73838c6 Made comments compatible with ehds2 branch 2024-07-10 14:39:46 +02:00
9e72b04824 Added instructions to stop and start Bridgehead 2024-07-10 14:25:21 +02:00
fbe68bc778 Adding more detail to EHDS2-specific installation tasks 2024-07-10 14:18:03 +02:00
17f372b06c Implement a gentler way of handling clock skew 2024-07-10 14:02:04 +02:00
a250d52998 Pinned Blaze version, increased Focus retry count 2024-07-02 14:05:38 +02:00
e309dc495a Improved docker-compose for transFAIR
In particular, corrected the code for detecting CSV files in the data directory.
The old code could not handle more than one CSV file.
2024-06-18 15:28:37 +02:00
53cdd49fd7 Improved docs, turned off obfuscation
ECDC does not want obfuscated results.
2024-03-28 11:04:08 +01:00
36a97ecc20 Removed ECDC URLs and certificates from dev branch 2024-03-27 16:04:25 +01:00
4 changed files with 42 additions and 42 deletions

View File

@ -7,16 +7,16 @@ if [ "${ENABLE_EHDS2}" == "true" ]; then
# The environment needs to be defined in /etc/bridgehead # The environment needs to be defined in /etc/bridgehead
case "$ENVIRONMENT" in case "$ENVIRONMENT" in
"production") "production")
export EHDS2_BROKER_ID=ecdc-vm-ehds-test1.swedencentral.cloudapp.azure.com export EHDS2_BROKER_ID=broker.bbmri.samply.de
export EHDS2_ROOT_CERT=ehds2 export EHDS2_ROOT_CERT=ehds2
;; ;;
"test") "test")
export EHDS2_BROKER_ID=ecdc-vm-ehds-test1.swedencentral.cloudapp.azure.com export EHDS2_BROKER_ID=broker.test.bbmri.samply.de
export EHDS2_ROOT_CERT=ehds2.test export EHDS2_ROOT_CERT=ehds2.test
;; ;;
*) *)
report_error 6 "Environment \"$ENVIRONMENT\" is unknown. Assuming production. FIX THIS!" report_error 6 "Environment \"$ENVIRONMENT\" is unknown. Assuming production. FIX THIS!"
export EHDS2_BROKER_ID=ecdc-vm-ehds-test1.swedencentral.cloudapp.azure.com export EHDS2_BROKER_ID=broker.bbmri.samply.de
export EHDS2_ROOT_CERT=ehds2 export EHDS2_ROOT_CERT=ehds2
;; ;;
esac esac

View File

@ -1,22 +1,22 @@
# EHDS2/ECDC certificate # DKFZ certificate
-----BEGIN CERTIFICATE----- -----BEGIN CERTIFICATE-----
MIIDNTCCAh2gAwIBAgIUamQJB/Uevzf3+qrDQOqA8mwkwX8wDQYJKoZIhvcNAQEL MIIDNTCCAh2gAwIBAgIUMy/n0zFRihhVR3aAD54LumzeYdwwDQYJKoZIhvcNAQEL
BQAwFjEUMBIGA1UEAxMLQnJva2VyLVJvb3QwHhcNMjQwMjA3MTQ1MTQxWhcNMzQw BQAwFjEUMBIGA1UEAxMLQnJva2VyLVJvb3QwHhcNMjIxMDI1MDczNTA4WhcNMzIx
MjA0MTQ1MjExWjAWMRQwEgYDVQQDEwtCcm9rZXItUm9vdDCCASIwDQYJKoZIhvcN MDIyMDczNTM3WjAWMRQwEgYDVQQDEwtCcm9rZXItUm9vdDCCASIwDQYJKoZIhvcN
AQEBBQADggEPADCCAQoCggEBAKvI2XT0os20vG7d8FjRuMq9mALcQgLZvjAbQZbm AQEBBQADggEPADCCAQoCggEBAL3qWliHIlIT1Qlsyq/NKJ1uj6/AF0STNg5NTNpb
JyeVxRQP5HsSrBlBwaZWgmXWFfIPlwsEsTAUsCneAl4ZL3gQ6831nbmmpgThOEVy Xqe5rmUqs6jmQepputGStBVe5TthFw56whISv9FqD5s1PZUGyFikW1pJUnF7ZYRf
rGBsbL6qlEWWplD/AGpcdEbAuDmuMSO9tKR6iRm+acTHJcXqsDm2HUUS7U+ManWY MfrJHRi1vUnD3Gw36FCot+i6BAxfw/rdp9hoqFZ6erRkULLaYZ5S2cDHN0DWc18V
S0dG10beJE2eVtEv5/fnFlVSn72VgAVgXVl7UA5E77zXK9GUAyQ6Oo7MET9zifZ/ 3VgZ66ah8QXSx7ERRNa/eWRkHrPIYhyVSoKuyZfvbVgsYZADSlviCgIHPrGLerLr
EifeSoEvLk+U7HRLgQbKz2ti6ABh0wnK7Ec2DjekMBXyeQz0tR+8dS53s5pqti7c ylNUyuTxJ5RKStOwPn7A+Jp7nRT+MRh9BphA7s6NuK9h+eVe1DiLbIETWyCEfN3Y
SUQMHmL4jKxvfQr7fr5wbJpFDu37Vif9GdND9WSDRcufuM8CAwEAAaN7MHkwDgYD INpunatn3QDhqOIfNcuBArjsAj7mg8l5KNba8nUP4v0EJYECAwEAAaN7MHkwDgYD
VR0PAQH/BAQDAgEGMA8GA1UdEwEB/wQFMAMBAf8wHQYDVR0OBBYEFKMF6QgDV4cV VR0PAQH/BAQDAgEGMA8GA1UdEwEB/wQFMAMBAf8wHQYDVR0OBBYEFMvc5Fizz1vO
WyQZn3EHKLUumXzuMB8GA1UdIwQYMBaAFKMF6QgDV4cVWyQZn3EHKLUumXzuMBYG MEG3MIsy7UY69ZNIMB8GA1UdIwQYMBaAFMvc5Fizz1vOMEG3MIsy7UY69ZNIMBYG
A1UdEQQPMA2CC0Jyb2tlci1Sb290MA0GCSqGSIb3DQEBCwUAA4IBAQAhhE0ht7Sp A1UdEQQPMA2CC0Jyb2tlci1Sb290MA0GCSqGSIb3DQEBCwUAA4IBAQBb8a5su820
inKLJSVZrdFHbAbRXnYcUz/3oyy/uw0YvF0dJAHz2sgbtCLMHzKU7NwotaEqZedA h8JStJC+KpvXmDrGkwx9bHlEZMgQQejIrwPLEbA32KBvNxdoUxF9q1Y773MKdqbc
I7688nI42aHggIkwa1CzmFo9ybQ2afgrYNeF+TcTQI6G+fFpeRT5I+FvA9hUI3r4 cCJwzQXE/NPZ13hCGrEIXs8DgH52GhEB5592k5/bRNcAvUwbZSXPPiT0rgq/eUOt
Kp63Si7cpQS5uiHs90sv2SNMedo2Gf9VyJKB7NOReQJWsrw32ITi4QLNKHcHciKm BYhgN0ov7h1MC5L6CYB/rQwqck7JPlmrXTkh2gix4/dEdBRzsHsn/xlo8ay5QYHG
cpi/OqbR1YTJRoUrcC655G7bSKENzccdTWo8kBJgYLVbe+FohqgheqPqWpdH2zoR rx2Adit76eZu/MJoJNzl1r8MPxLqyAie3KcIU54A+UMozLrWEQP/TyOyWZdjUjJt
OxOwviutfJTNvDyhXu8FrDc5tr9f5VjXv1hK2szYuvggwbybUBB9bLsx+fV79oZe cBYgkKJTjwdRhc+ehI3kFo7b/a/Z/jl9szKsAPHozMixSi8lGnsYwN80oqeRvT7h
3zR0j5YwB28G wcMUK+igv3/K
-----END CERTIFICATE----- -----END CERTIFICATE-----

View File

@ -1,22 +1,22 @@
# EHDS2/ECDC certificate # DKFZ certificate
-----BEGIN CERTIFICATE----- -----BEGIN CERTIFICATE-----
MIIDNTCCAh2gAwIBAgIUamQJB/Uevzf3+qrDQOqA8mwkwX8wDQYJKoZIhvcNAQEL MIIDNTCCAh2gAwIBAgIUJ0g7k2vrdAwNTU38S1/mU8NO26MwDQYJKoZIhvcNAQEL
BQAwFjEUMBIGA1UEAxMLQnJva2VyLVJvb3QwHhcNMjQwMjA3MTQ1MTQxWhcNMzQw BQAwFjEUMBIGA1UEAxMLQnJva2VyLVJvb3QwHhcNMjMwNzEwMTIyMzQxWhcNMzMw
MjA0MTQ1MjExWjAWMRQwEgYDVQQDEwtCcm9rZXItUm9vdDCCASIwDQYJKoZIhvcN NzA3MTIyNDExWjAWMRQwEgYDVQQDEwtCcm9rZXItUm9vdDCCASIwDQYJKoZIhvcN
AQEBBQADggEPADCCAQoCggEBAKvI2XT0os20vG7d8FjRuMq9mALcQgLZvjAbQZbm AQEBBQADggEPADCCAQoCggEBALMvc/fApbsAl+/NXDszNgffNR5llAb9CfxzdnRn
JyeVxRQP5HsSrBlBwaZWgmXWFfIPlwsEsTAUsCneAl4ZL3gQ6831nbmmpgThOEVy ryoBqZdPevBYZZfKBARRKjFbXRDdPWbE7erDeo1LiCM6PObXCuT9wmGWJtvfkmqW
rGBsbL6qlEWWplD/AGpcdEbAuDmuMSO9tKR6iRm+acTHJcXqsDm2HUUS7U+ManWY 3Z/a75e4r360kceMEGVn4kWpi9dz8s7+oXVZURjW2r13h6pq6xQNZDNlXmpR8wHG
S0dG10beJE2eVtEv5/fnFlVSn72VgAVgXVl7UA5E77zXK9GUAyQ6Oo7MET9zifZ/ 58TSrQC4n1vzdSwMWdptgOA8Sw8adR7ZJI1yNZpmynB2QolKKNESI7FcSKC/+b+H
EifeSoEvLk+U7HRLgQbKz2ti6ABh0wnK7Ec2DjekMBXyeQz0tR+8dS53s5pqti7c LoPkseAwQG9yJo23qEw1GZS67B47iKIqX2wp9VLQobHw7ncrhKXQLSWq973k/Swp
SUQMHmL4jKxvfQr7fr5wbJpFDu37Vif9GdND9WSDRcufuM8CAwEAAaN7MHkwDgYD 7lBdfOsTouf72flLiF1HbdOLcFDmWgIbf5scj2HaQe8b/UcCAwEAAaN7MHkwDgYD
VR0PAQH/BAQDAgEGMA8GA1UdEwEB/wQFMAMBAf8wHQYDVR0OBBYEFKMF6QgDV4cV VR0PAQH/BAQDAgEGMA8GA1UdEwEB/wQFMAMBAf8wHQYDVR0OBBYEFHYxBJiJZieW
WyQZn3EHKLUumXzuMB8GA1UdIwQYMBaAFKMF6QgDV4cVWyQZn3EHKLUumXzuMBYG e6G1vwn6Q36/crgNMB8GA1UdIwQYMBaAFHYxBJiJZieWe6G1vwn6Q36/crgNMBYG
A1UdEQQPMA2CC0Jyb2tlci1Sb290MA0GCSqGSIb3DQEBCwUAA4IBAQAhhE0ht7Sp A1UdEQQPMA2CC0Jyb2tlci1Sb290MA0GCSqGSIb3DQEBCwUAA4IBAQCN6WVNYpWJ
inKLJSVZrdFHbAbRXnYcUz/3oyy/uw0YvF0dJAHz2sgbtCLMHzKU7NwotaEqZedA 6Z1Ee+otLZYMXhjyR6NUQ5s0aHiug97gB8mTiNlgXiiTgipCbofEmENgh1inYrPC
I7688nI42aHggIkwa1CzmFo9ybQ2afgrYNeF+TcTQI6G+fFpeRT5I+FvA9hUI3r4 WfdXxqOaekSXCQW6nSO1KtBzEYtkN5LrN1cjKqt51P2DbkllinK37wwCS2Kfup1+
Kp63Si7cpQS5uiHs90sv2SNMedo2Gf9VyJKB7NOReQJWsrw32ITi4QLNKHcHciKm yjhTRxrehSIfsMVK6bTUeSoc8etkgwErZpORhlpqZKWhmOwcMpgsYJJOLhUetqc1
cpi/OqbR1YTJRoUrcC655G7bSKENzccdTWo8kBJgYLVbe+FohqgheqPqWpdH2zoR UNe/254bc0vqHEPT6VI/86c7qAmk1xR0RUfrnKAEqZtUeuoj2fe1L/6yOB16fxt5
OxOwviutfJTNvDyhXu8FrDc5tr9f5VjXv1hK2szYuvggwbybUBB9bLsx+fV79oZe 3V3oim7EO6eZCTjDo9fU5DaFiqSMe7WVdr03Na0cWet60XKRH/xaiC6gMWdHWcbh
3zR0j5YwB28G vZdXnV1qjlM2
-----END CERTIFICATE----- -----END CERTIFICATE-----

View File

@ -267,7 +267,7 @@ function clone_repo_if_nonexistent() {
function clone_transfair_if_nonexistent() { function clone_transfair_if_nonexistent() {
local base_dir="$1" local base_dir="$1"
clone_repo_if_nonexistent https://github.com/samply/transFAIR.git $base_dir/transfair ehds2 clone_repo_if_nonexistent https://github.com/samply/transFAIR.git $base_dir/transfair ehds2_develop
} }
function clone_focus_if_nonexistent() { function clone_focus_if_nonexistent() {