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22 Commits

Author SHA1 Message Date
667048d49f WIP blaze frontend 2024-05-28 14:14:36 +02:00
68f06c0d9d Merge pull request #185 from samply/update/focus_main
switch focus of ccp to tag
2024-05-21 16:21:22 +02:00
033da484d1 switch focus of ccp to tag 2024-05-21 16:16:40 +02:00
714e46f082 Merge pull request #184 from samply/refactor/mainzelliste-return-ssl
Ensure Mainzelliste returns SSL in Responses
2024-04-29 08:33:00 +02:00
29c2b5ef69 refactor: Ensure Mainzelliste returns SSL in Responses
Before, the Mainzelliste would always use http instead of https then
referring to it self in responses
2024-04-26 11:29:38 +02:00
433edde75a Merge pull request #182 from samply/revert-177-maintenance/gbn
Revert "GBN maintenance mode"
2024-04-18 11:37:11 +02:00
fe3fc6204a Revert "GBN maintenance mode" 2024-04-18 11:01:04 +02:00
4b3b13b101 Merge pull request #177 from samply/maintenance/gbn
GBN maintenance mode
2024-04-17 20:47:35 +02:00
1afbf88a76 fix: use only bbmri broker 2024-04-16 09:23:42 +02:00
7d5f771181 Merge pull request #181 from samply/fix/secret-sync-args
fix: Generate public oidc client when there is no private client
2024-04-16 09:15:53 +02:00
f9a9baf13d fix: Generate public oidc client when there is no private client 2024-04-15 15:53:27 +02:00
d4259406a9 Merge pull request #180 from samply/fix/secret-sync
fix: Kill stale secret-sync instances
2024-04-15 13:18:38 +02:00
0745eab7b5 fix: Kill stale secret-sync instances 2024-04-15 13:14:46 +02:00
b404277083 Merge pull request #179 from samply/update/focus_0_4_4
update: dktk focus to 0.4.4
2024-04-15 11:02:31 +02:00
b767b3230f update: dktk focus to 0.4.4 2024-04-15 10:13:16 +02:00
dd653a7871 Merge pull request #178 from samply/PierreDelpy-patch-1
fix typo functions.sh
2024-04-15 09:09:47 +02:00
7418861e8c fix typo functions.sh 2024-04-15 09:08:56 +02:00
94b2c29bc7 GBN maintenance mode 2024-04-15 08:31:57 +02:00
ac3ff314ff Merge pull request #176 from samply/fix/bash-math
fix: Make math work on bash 4.2
2024-04-03 12:59:52 +02:00
2831fb9a22 fix: Make math work on bash 4.2 2024-04-02 14:36:23 +02:00
7934d912b8 Merge pull request #175 from samply/update/focus_0_4_2
Update focus to 0.4.2
2024-03-22 14:11:09 +01:00
70ad318b28 Update focus to 0.4.2 2024-03-22 13:59:42 +01:00
5 changed files with 31 additions and 6 deletions

View File

@ -96,6 +96,8 @@ case "$ACTION" in
;;
stop)
loadVars
# Kill stale secret-sync instances if present
docker kill $(docker ps -q --filter ancestor=docker.verbis.dkfz.de/cache/samply/secret-sync-local) 2>/dev/null || true
# HACK: This is temporarily to properly shut down false bridgehead instances (bridgehead-ccp instead ccp)
$COMPOSE -p bridgehead-$PROJECT -f ./minimal/docker-compose.yml -f ./$PROJECT/docker-compose.yml $OVERRIDE down
exec $COMPOSE -p $PROJECT -f ./minimal/docker-compose.yml -f ./$PROJECT/docker-compose.yml $OVERRIDE down

View File

@ -20,8 +20,29 @@ services:
- "traefik.http.routers.blaze_ccp.middlewares=ccp_b_strip,auth"
- "traefik.http.routers.blaze_ccp.tls=true"
frontend:
image: "samply/blaze-frontend:latest"
environment:
ORIGIN: "https://${HOST}/ccp-blaze-frontend"
BACKEND_BASE_URL: "https://${HOST}/ccp-localdatamanagement"
AUTH_CLIENT_ID: "${OIDC_PRIVATE_CLIENT_ID}"
AUTH_CLIENT_SECRET: "${OIDC_CLIENT_SECRET}"
AUTH_ISSUER: "${OIDC_URL}"
AUTH_SECRET: "666df42c74ce1f4728fe2ffe99b146e0f2e4b4f9810594fcf68c0330495bca0f" # TODO: Generate
PROTOCOL_HEADER: "x-forwarded-proto"
HOST_HEADER: "x-forwarded-host"
depends_on:
- blaze
labels:
- "traefik.enable=true"
- "traefik.http.routers.blaze_frontend.rule=PathPrefix(`/ccp-blaze-frontend`)"
- "traefik.http.middlewares.ccp_blaze_frontend_strip.stripprefix.prefixes=/ccp-blaze-frontend"
- "traefik.http.routers.blaze_ccp.middlewares=ccp_blaze_frontend_strip"
- "traefik.http.services.blaze_frontend.loadbalancer.server.port=3000"
- "traefik.http.routers.blaze_frontend.tls=true"
focus:
image: docker.verbis.dkfz.de/cache/samply/focus:0.4.1
image: docker.verbis.dkfz.de/cache/samply/focus:${FOCUS_TAG}
container_name: bridgehead-focus
environment:
API_KEY: ${FOCUS_BEAM_SECRET_SHORT}

View File

@ -29,6 +29,7 @@ services:
container_name: bridgehead-patientlist
environment:
- TOMCAT_REVERSEPROXY_FQDN=${HOST}
- TOMCAT_REVERSEPROXY_SSL=true
- ML_SITE=${IDMANAGEMENT_FRIENDLY_ID}
- ML_DB_PASS=${PATIENTLIST_POSTGRES_PASSWORD}
- ML_API_KEY=${IDMANAGER_LOCAL_PATIENTLIST_APIKEY}

View File

@ -17,6 +17,7 @@ OIDC_REALM="${OIDC_REALM:-master}"
OIDC_URL="https://login.verbis.dkfz.de"
OIDC_ISSUER_URL="${OIDC_URL}/realms/${OIDC_REALM}"
OIDC_GROUP_CLAIM="groups"
add_private_oidc_redirect_url "/ccp-localdatamanagement"
POSTGRES_TAG=15.6-alpine

View File

@ -164,15 +164,15 @@ setHostname() {
optimizeBlazeMemoryUsage() {
if [ -z "$BLAZE_MEMORY_CAP" ]; then
system_memory_in_mb=$(LC_ALL=C free -m | grep 'Mem:' | awk '{print $2}');
export BLAZE_MEMORY_CAP=$(("$system_memory_in_mb"/4));
export BLAZE_MEMORY_CAP=$(($system_memory_in_mb/4));
fi
if [ -z "$BLAZE_RESOURCE_CACHE_CAP" ]; then
available_system_memory_chuncks=$((BLAZE_MEMORY_CAP / 1000))
if [ $available_system_memory_chuncks -eq 0 ]; then
available_system_memory_chunks=$((BLAZE_MEMORY_CAP / 1000))
if [ $available_system_memory_chunks -eq 0 ]; then
log WARN "Only ${BLAZE_MEMORY_CAP} system memory available for Blaze. If your Blaze stores more than 128000 fhir ressources it will run significally slower."
export BLAZE_RESOURCE_CACHE_CAP=128000;
else
export BLAZE_RESOURCE_CACHE_CAP=$((available_system_memory_chuncks * 312500))
export BLAZE_RESOURCE_CACHE_CAP=$((available_system_memory_chunks * 312500))
fi
fi
}
@ -289,7 +289,7 @@ function sync_secrets() {
if [[ $OIDC_PRIVATE_REDIRECT_URLS != "" ]]; then
secret_sync_args="OIDC:OIDC_CLIENT_SECRET:private;$OIDC_PRIVATE_REDIRECT_URLS"
fi
if [[ $OIDC_PRIVATE_REDIRECT_URLS != "" ]]; then
if [[ $OIDC_PUBLIC_REDIRECT_URLS != "" ]]; then
if [[ $secret_sync_args == "" ]]; then
secret_sync_args="OIDC:OIDC_PUBLIC:public;$OIDC_PUBLIC_REDIRECT_URLS"
else