version: "3.7" services: ############################################ DataSHIELD Client (Rocker R-Studio) rstudio: container_name: bridgehead-rstudio image: docker.verbis.dkfz.de/ccp/dktk-rstudio:latest #TODO: Connect with Keycloak: https://rocker-project.org/images/versioned/rstudio.html environment: USER: "ruser" PASSWORD: "${RSTUDIO_PASSWORD}" HTTP_RELATIVE_PATH: "/rstudio" labels: - "traefik.enable=true" - "traefik.http.routers.rstudio_ccp.rule=PathPrefix(`/rstudio`)" - "traefik.http.services.rstudio_ccp.loadbalancer.server.port=8787" - "traefik.http.routers.rstudio_ccp.tls=true" - "traefik.http.middlewares.rstudio_ccp_strip.stripprefix.prefixes=/rstudio" - "traefik.http.routers.rstudio_ccp.middlewares=rstudio_ccp_strip" #volumes: #- "bridgehead-rstudio-config:/home/rstudio/.config/rstudio" #- "bridgehead-rstudio-workspace:/home/rstudio/workspace" ############################################ DataSHIELD Server (Opal) opal: container_name: bridgehead-opal image: obiba/opal:4.5 labels: - "traefik.enable=true" - "traefik.http.routers.opal_ccp.rule=PathPrefix(`/opal`)" - "traefik.http.services.opal_ccp.loadbalancer.server.port=8080" - "traefik.http.routers.opal_ccp.tls=true" links: - opal-rserver - opal-db environment: JAVA_OPTS: "-Xms1G -Xmx8G -XX:+UseG1GC" # OPAL_ADMINISTRATOR_USER: "administrator" # Please, don't remove this line. It is informative. OPAL_ADMINISTRATOR_PASSWORD: "${OPAL_ADMINISTRATOR_PASSWORD}" POSTGRESDATA_HOST: "opal-db" POSTGRESDATA_DATABASE: "opal" POSTGRESDATA_USER: "opal" POSTGRESDATA_PASSWORD: "${OPAL_DB_PASSWORD}" ROCK_HOSTS: "opal-rserver:8085" APP_URL: "https://${HOST}/opal" APP_CONTEXT_PATH: "/opal" # volumes: # - "bridgehead-opal:/srv" opal-db: # Data container_name: bridgehead-opal-db image: postgres:15.1-alpine environment: POSTGRES_PASSWORD: "${OPAL_DB_PASSWORD}" POSTGRES_USER: "opal" POSTGRES_DB: "opal" # volumes: # - "bridgehead-opal-db:/var/lib/postgresql/data" opal-rserver: container_name: bridgehead-opal-rserver image: datashield/rock-base:6.2-R4.2 # https://datashield.discourse.group/t/ds-aggregate-method-error/416/4 beam-connect: image: docker.verbis.dkfz.de/cache/samply/beam-connect:develop container_name: bridgehead-datashield-connect ports: - 8062:8062 environment: PROXY_URL: "http://beam-proxy:8081" APP_ID: datashield-connect.${SITE_ID}.${BROKER_ID} PROXY_APIKEY: ${DATASHIELD_CONNECT_SECRET} DISCOVERY_URL: "./map/central.json" LOCAL_TARGETS_FILE: "./map/local.json" depends_on: - beam-proxy volumes: - /etc/bridgehead/datashield-connect/:/map:ro beam-proxy: environment: APP_2_ID: datashield-connect APP_2_KEY: ${DATASHIELD_CONNECT_SECRET} #volumes: # bridgehead-rstudio-config: # name: "bridgehead-rstudio-config" # bridgehead-rstudio-workspace: # name: "bridgehead-rstudio-workspace" # bridgehead-opal-db: # name: "bridgehead-opal-db" # bridgehead-opal: # name: "bridgehead-opal"