version: "3.7" services: mongo: image: mongo:latest container_name: bridgehead-ccp-ovis-mongo restart: always command: mongod volumes: - /var/cache/bridgehead/ccp/ovis/mongo/init/init.js:/docker-entrypoint-initdb.d/init.js:ro ovis-backend-data-preprocessing: image: docker.verbis.dkfz.de/ovis/ovis-backend-preprocessor:latest container_name: bridgehead-ccp-ovis-preprocessing restart: on-failure user: root working_dir: /app environment: APOLLO_PORT: "4001" CREDOS_PORT: "4000" HTTP_PROXY: "" HTTPS_PROXY: "" NO_PROXY: "" http_proxy: "" https_proxy: "" no_proxy: "" CORS_ORIGIN: "*" DB: onc_test ADRESS: mongodb://mongo:27017 MONGO_VER: latest OVIS_PREPROC_DECEASED_KEYWORDS: '["verstorben","dead","deceased","not alive","gestorben"]' OVIS_PREPROC_REZIDIV_PREFIXES: '["Rezidiv"]' OVIS_PREPROC_REZIDIV_CANONICAL: Rezidiv OVIS_PREPROC_REZIDIV_LYMPH_STATES: '["Rezidiv","Neu"]' OVIS_PREPROC_PROGRESS_LABELS: '["Progression","Divergentes Geschehen","Rezidiv"]' OVIS_PREPROC_COMPLETE_REMISSION_LABELS: '["Vollremission / Tumorfrei (complete remission)"]' OVIS_PREPROC_RCLASS_SUCCESS: '["R0"]' OVIS_PREPROC_LOCAL_RSTATE_SUCCESS: '["R0"]' OVIS_PREPROC_METASTASIS_PREFIXES: '["Rezidiv","Neu"]' OVIS_PREPROC_METASTASIS_SPREAD_VALUES: '["Neu","Rezidiv","Tumornachweis"]' OVIS_PREPROC_METASTASIS_STRAT_SYNCHRON: Synchrone Metastasierung OVIS_PREPROC_METASTASIS_STRAT_NONE: keine synchrone Metastasierung OVIS_PREPROC_NULL_STUDY_PHASES: '["NOPH","KA"]' OVIS_PREPROC_PREV_THERAPY_SURGERY: '["operation"]' OVIS_PREPROC_PREV_THERAPY_SYSTEMIC: '["systemic"]' OVIS_PREPROC_PREV_THERAPY_RADIATION: '["radiation"]' OVIS_PREPROC_PREV_CONSULTATION_NUTRITION: '["nutrition"]' OVIS_PREPROC_PREV_CONSULTATION_SOCIAL: '["social"]' OVIS_PREPROC_PREV_CONSULTATION_PSYCHO: '["psycho"]' OVIS_PREPROC_PREV_CONSULTATION_GENETIC: '["genetic"]' OVIS_PREPROC_TUMORBOARD_PATTERN_PRAE: prae|prä|pre OVIS_PREPROC_TUMORBOARD_PATTERN_POST: post OVIS_PREPROC_TUMORBOARD_PATTERN_MTB: mtb OVIS_PREPROC_ECOG_PREFIX: ECOG OVIS_PREPROC_DISTRESS_TYPE: distress OVIS_PREPROC_DISTRESS_POSITIVE_VALUES: '["Positiv"]' depends_on: - mongo volumes: - /var/cache/bridgehead/ccp/ovis/shared_data:/app/generated healthcheck: test: ["CMD-SHELL", "node -e \"require('http').get('http://localhost:9000/health', res => process.exit(res.statusCode===200?0:1)).on('error', () => process.exit(1));\""] interval: 10s timeout: 5s retries: 6 start_period: 5s command: ["node", "./Preprocessing/catalogue-service.mjs"] ovis-backend-data-import: image: docker.verbis.dkfz.de/ovis/ovis-backend-data-import-demo:latest container_name: bridgehead-ccp-ovis-import restart: on-failure depends_on: ovis-backend-data-preprocessing: condition: service_healthy environment: # CCP mode: FHIR source configuration (ignored by DEMO image) FHIR_SERVER_URL: http://bridgehead-ccp-blaze:8080/fhir FHIR_USERNAME: your-fhir-username FHIR_PASSWORD: your-fhir-password ICD10_FILTER: "" # Required for both CCP and DEMO: preprocessor upload endpoint OVIS_PREPROCESSOR_URL: http://ovis-backend-data-preprocessing:9000/omock # Proxy configuration HTTP_PROXY: "" HTTPS_PROXY: "" NO_PROXY: "" http_proxy: "" https_proxy: "" no_proxy: "" volumes: - /var/cache/bridgehead/ccp/ovis/shared_data:/shared backend: image: docker.verbis.dkfz.de/ovis/ovis-backend-apollo:latest container_name: bridgehead-ccp-ovis-backend restart: always user: root working_dir: /app environment: APOLLO_PORT: "4001" CREDOS_PORT: "4000" CORS_ORIGIN: "*" DB: onc_test ADRESS: mongodb://mongo:27017 depends_on: - mongo - ovis-backend-data-preprocessing - ovis-backend-data-import healthcheck: test: ["CMD-SHELL", "test -d /app/node_modules/mongodb"] interval: 10s timeout: 5s retries: 5 frontend: image: docker.verbis.dkfz.de/ovis/ovis-frontend:latest container_name: bridgehead-ccp-ovis-frontend restart: always environment: PUBLIC_GRAPHQL_URL: https://${HOST}/ccp-ovis/graphql PUBLIC_LOGIN_ENABLED: "false" PUBLIC_OVIS_IMPORT: demo OVIS_CATALOGUE_UPSTREAM_URL: http://ovis-backend-data-preprocessing:9000/catalogue HTTP_PROXY: "" HTTPS_PROXY: "" NO_PROXY: "" http_proxy: "" https_proxy: "" no_proxy: "" depends_on: backend: condition: service_healthy volumes: # Dynamic catalogue from preprocessing service - /var/cache/bridgehead/ccp/ovis/shared_data:/app/dynamic-catalogue:ro labels: - "traefik.enable=true" - "traefik.http.routers.ovis-frontend-ccp.tls=true" - "traefik.http.routers.ovis-frontend-ccp.rule=PathPrefix(`/ccp-ovis`)" - "traefik.http.middlewares.ovis-frontend-ccp-strip.stripprefix.prefixes=/ccp-ovis" - "traefik.http.routers.ovis-frontend-ccp.middlewares=ovis-frontend-ccp-strip" - "traefik.http.services.ovis-frontend.loadbalancer.server.port=5173"