mirror of https://github.com/samply/bridgehead.git
74 lines
2.7 KiB
YAML
74 lines
2.7 KiB
YAML
version: "3.7"
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services:
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############################################ DataSHIELD Client (Rocker R-Studio)
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bridgehead-rstudio:
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image: docker.verbis.dkfz.de/ccp/dktk-rstudio:latest
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#TODO: Connect with Keycloak: https://rocker-project.org/images/versioned/rstudio.html
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environment:
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USER: "ruser"
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PASSWORD: "${RSTUDIO_PASSWORD}"
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labels:
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- "traefik.enable=true"
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- "traefik.http.routers.rstudio_ccp.rule=PathPrefix(`/rstudio`)"
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- "traefik.http.services.rstudio_ccp.loadbalancer.server.port=8787"
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- "traefik.http.routers.rstudio_ccp.tls=true"
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- "traefik.http.middlewares.rstudio_ccp_strip.stripprefix.prefixes=/rstudio"
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- "traefik.http.routers.rstudio_ccp.middlewares=rstudio_ccp_strip"
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volumes:
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- "bridgehead-dev-rstudio-config:/home/rstudio/.config/rstudio"
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- "bridgehead-dev-rstudio-workspace:/home/rstudio/workspace"
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############################################ DataSHIELD Server (Opal)
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bridgehead-opal:
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image: obiba/opal:4.5
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labels:
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- "traefik.enable=true"
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- "traefik.http.routers.opal_ccp.rule=PathPrefix(`/opal`)"
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- "traefik.http.services.opal_ccp.loadbalancer.server.port=8443"
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- "traefik.http.routers.opal_ccp.tls=true"
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- "traefik.http.middlewares.opal_ccp_strip.stripprefix.prefixes=/opal"
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- "traefik.http.routers.opal_ccp.middlewares=opal_ccp_strip"
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links:
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- bridgehead-opal-rserver
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- bridgehead-opal-mongo
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- bridgehead-opal-db
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environment:
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JAVA_OPTS: "-Xms1G -Xmx8G -XX:+UseG1GC"
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# OPAL_ADMINISTRATOR_USER: "administrator"
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OPAL_ADMINISTRATOR_PASSWORD: "${OPAL_ADMINISTRATOR_PASSWORD}"
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MONGO_HOST: "bridgehead-opal-mongo"
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MONGO_PORT: "27017"
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POSTGRESDATA_HOST: "bridgehead-opal-db"
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POSTGRESDATA_DATABASE: "opal"
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POSTGRESDATA_USER: "opal"
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POSTGRESDATA_PASSWORD: "${OPAL_DB_PASSWORD}"
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ROCK_HOSTS: "bridgehead-opal-rserver:8085"
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volumes:
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- "bridgehead-dev-opal:/srv"
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bridgehead-opal-mongo: # IDs
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image: mongo:4.2 # TODO: Update mongo:6.0.4
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bridgehead-opal-db: # Data
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image: postgres:15.1-alpine
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environment:
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POSTGRES_PASSWORD: "${OPAL_DB_PASSWORD}"
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POSTGRES_USER: "opal"
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POSTGRES_DB: "opal"
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volumes:
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- "bridgehead-opal-db:/var/lib/postgresql/data"
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bridgehead-opal-rserver:
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image: datashield/rock-base:6.2-R4.2 # https://datashield.discourse.group/t/ds-aggregate-method-error/416/4
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volumes:
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bridgehead-dev-rstudio-config:
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name: "bridgehead-dev-rstudio-config"
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bridgehead-dev-rstudio-workspace:
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name: "bridgehead-dev-rstudio-workspace"
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bridgehead-opal-db:
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name: "bridgehead-opal-db"
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bridgehead-dev-opal:
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name: "bridgehead-dev-opal"
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