2022-12-02 15:38:33 +01:00
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version: "3.7"
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services:
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mtba:
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image: samply/mtba:develop
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container_name: bridgehead-mtba
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environment:
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BLAZE_STORE_URL: http://bridgehead-ccp-blaze:8080/fhir
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# NOTE: Aktuell Berechtigungen wie MagicPL!!!
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2022-12-16 15:01:04 +01:00
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# TODO: Add separate ApiKey to MagicPL only for MTBA!
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ID_MANAGER_API_KEY: ${IDMANAGER_UPLOAD_APIKEY}
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2022-12-02 15:38:33 +01:00
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ID_MANAGER_PSEUDONYM_ID_TYPE: BK_${IDMANAGEMENT_FRIENDLY_ID}_L-ID
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ID_MANAGER_URL: http://bridgehead-id-manager:8080
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PATIENT_CSV_FIRST_NAME_HEADER: ${PATIENT_CSV_FIRST_NAME_HEADER:-"FIRST_NAME"}
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PATIENT_CSV_LAST_NAME_HEADER: ${PATIENT_CSV_LAST_NAME_HEADER:-"LAST_NAME"}
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PATIENT_CSV_GENDER_HEADER: ${PATIENT_CSV_GENDER_HEADER:-"GENDER"}
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PATIENT_CSV_BIRTHDAY_HEADER: ${PATIENT_CSV_BIRTHDAY_HEADER:-"BIRTHDAY"}
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CBIOPORTAL_URL: http://bridgehead-ccp-cbioportal:8080
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MUTATIONS_CSV_SCRIPT_INTERPRETER: "python3"
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labels:
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- "traefik.enable=true"
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- "traefik.http.routers.mtba.rule=PathPrefix(`/`)"
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- "traefik.http.services.mtba.loadbalancer.server.port=80"
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- "traefik.http.routers.mtba.tls=true"
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volumes:
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# This directory persists the FHIR Resources that are needed to import data into blaze.
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2023-01-17 08:56:02 +01:00
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- /var/lib/bridgehead/data/mtba:/app/mtba-files/persist
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2022-12-02 15:38:33 +01:00
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# Place new import files in this directory
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- /tmp/bridgehead/mtba/:/app/mtba-files/input
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# TODO: Include CBioPortal in Deployment ...
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# NOTE: CBioPortal can't load data while the system is running. So after import of data bridgehead needs to be restarted!
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# TODO: Find a trigger to let mtba signal a restart for CBioPortal
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