Merge pull request #4 from samply/feature/bd24

WIP: Feature/bd24
2022-04-28 08:48:13 +02:00
parent cd149277ef ddc2be5a1d
commit f0f89f0a6b
6 changed files with 224 additions and 6 deletions
--- a/auth/dktk
+++ b/auth/dktk
@@ -0,0 +1 @@
+ps:$apr1$wl54tz29$glQPyZIoNEosI0zQDHXz1.
--- a/dktk-fed/docker-compose.yml
+++ b/dktk-fed/docker-compose.yml
@@ -1,8 +1,9 @@
 version: "3.7"

 services:
+  ### Does not need proxy settings
  traefik:
-    container_name: bridgehead_traefik
+    container_name: bridgehead-traefik
    image: traefik:2.4
    command:
      - --api.insecure=true
@@ -24,9 +25,21 @@ services:
      - ../auth/:/auth
    extra_hosts:
      - "host.docker.internal:host-gateway"
+
  
+  ### Does need to know the outside proxy to connect central components
+  forward_proxy:
+    container_name: bridgehead-squid
+    image: ubuntu/squid
+    environment:
+      http_proxy: ${http_proxy}
+      https_proxy: ${https_proxy}
+    volumes:
+      - "bridgehead-proxy:/var/log/squid"
+    
+## Needs internal proxy config
  landing:
-    container_name: bridgehead_landingpage
+    container_name: bridgehead-landingpage
    image: nginx:stable
    volumes:
      - ../landing/:/usr/share/nginx/html
@@ -36,9 +49,10 @@ services:
      - "traefik.http.services.landing.loadbalancer.server.port=80"
      - "traefik.http.routers.landing.tls=true"

+## Needs internal proxy config
  blaze:
    image: "samply/blaze:0.16"
-    container_name: bridgehead_dktk_blaze
+    container_name: bridgehead-dktk-blaze
    environment:
      BASE_URL: "http://blaze:8080"
      JAVA_TOOL_OPTIONS: "-Xmx4g"
@@ -55,7 +69,39 @@ services:
      - "traefik.http.routers.blaze_dktk.middlewares=dktk_b_strip,test-auth"
      - "traefik.http.routers.blaze_dktk.tls=true"
 
-  # dktk-fed-search-share:
+  dktk-connector:
+      image: "samply/share-client:gbn-feature-environmentPreconfiguration"
+      environment:
+        POSTGRES_HOST: "dktk-connector-db"
+        POSTGRES_PASSWORD: "123"
+        STORE_URL: "http://bridgehead-blaze:8080/fhir"
+        MDR_URL: "https://mdr.ccp-it.dktk.dkfz.de/v3/api/mdr"
+        DEPLOYMENT_CONTEXT: "dktk-connector"
+      volumes:
+        - "dktk-connector-logs:/usr/local/tomcat/logs"
+      labels:
+        - "traefik.enable=true"
+        - "traefik.http.routers.dktk_connector.rule=PathPrefix(`/dktk-connector`)"
+        - "traefik.http.services.dktk_connector.loadbalancer.server.port=8080"
+        - "traefik.http.routers.landing.tls=true"
+
+      depends_on:
+        - "dktk-connector-db"
+        - "forward_proxy"
+      restart: "always"
+
+  dktk-connector-db:
+      image: "postgres:10.17"
+      environment:
+        POSTGRES_DB: "samply.connector"
+        POSTGRES_USER: "samply"
+        POSTGRES_PASSWORD: "123"
+      volumes:
+        - "dktk-connector-db-data:/var/lib/postgresql/data"
+      restart: "always"
+
+  
+    # dktk-fed-search-share:
  #   image: "ghcr.io/samply/dktk-fed-search-share:pr-1"
  #   container_name: bridgehead_dktk_share
  #   environment:
@@ -89,4 +135,6 @@ services:

 volumes:
  blaze-data:
+  dktk-connector-logs:
+  dktk-connector-db-data:
  # dktk-fed-search-share-db-data:
--- a/landing/index.html
+++ b/landing/index.html
@@ -0,0 +1,84 @@
+<html lang="en">
+
+<head>
+  <meta charset="utf-8">
+  <meta name="viewport" content="width=device-width, initial-scale=1">
+  <meta name="description" content="">
+  <title>Bridgehead Overview</title>
+  <!-- Bootstrap core CSS -->
+  <link href="https://cdn.jsdelivr.net/npm/bootstrap@5.1.3/dist/css/bootstrap.min.css" rel="stylesheet"
+    integrity="sha384-1BmE4kWBq78iYhFldvKuhfTAU6auU8tT94WrHftjDbrCEXSU1oBoqyl2QvZ6jIW3" crossorigin="anonymous">
+  <script src="https://cdn.jsdelivr.net/npm/bootstrap@5.1.3/dist/js/bootstrap.bundle.min.js"
+    integrity="sha384-ka7Sk0Gln4gmtz2MlQnikT1wXgYsOg+OMhuP+IlRH9sENBO0LRn5q+8nbTov4+1p"
+    crossorigin="anonymous"></script>
+
+</head>
+
+<body>
+
+  <nav class="navbar navbar-light" style="background-color: #aad7f6;">
+    <h2 class="pb-2 border-bottom">Bridgehead </h2>
+  </nav>
+  <div class="container px-4 py-5" id="featured-3">
+    <div>
+      <h2>Components</h2>
+      <h3>Central</h3>
+      <table class="table">
+        <thead class="thead-dark">
+          <tr>
+            <th style="width: 50%">Group</th>
+            <th style="width: 50%">Service</th>
+          </tr>
+        </thead>
+        <tbody>
+          <tr>
+            <td>CCP-IT</td>
+            <td><a href="https://patientlist.ccp-it.dktk.dkfz.de">Zentrale Patientenliste</td>
+          </tr>
+          <tr>
+            <td>CCP-IT</td>
+            <td><a href="https://decentralsearch.ccp-it.dktk.dkfz.de">Dezentrale Suche</td>
+          </tr>
+          <tr>
+            <td>CCP-IT</td>
+            <td><a href="https://centralsearch.ccp-it.dktk.dkfz.de">Zentrale Suche</td>
+          </tr>
+          <tr>
+            <td>CCP-IT</td>
+            <td><a href="https://deployment.ccp-it.dktk.dkfz.de">Deployment-Server</td>
+          </tr>
+          <tr>
+            <td>CCP-IT</td>
+            <td><a href="https://dktk-kne.kgu.de">Zentraler Kontrollnummernerzeuger</td>
+          </tr>
+        </tbody>
+      </table>
+    </div>
+
+    <div>
+      <h3>Local</h3>
+      <table class="table">
+        <thead class="thead-dark">
+          <tr>
+            <th style="width: 50%">Project</th>
+            <th style="width: 50%">Services</th>
+          </tr>
+        </thead>
+        <tbody>
+          <tr>
+            <td>Bridgehead</td>
+            <td>Reverse Proxy <a href="http://e260-serv-05:8080/">Traefik</a></td>
+          </tr>
+          <tr>
+            <td>DKTK</td>
+            <td><a href="http://e260-serv-05/dktk-localdatamanagement/fhir/">Blaze</a></td>
+          </tr>
+        </tbody>
+      </table>
+    </div>
+    <footer class="footer mt-auto py-3 ">
+     <a href="https://dktk.dkfz.de/"><img src="https://www.oncoray.de/fileadmin/files/bilder_gruppen/DKTK/Logo_DKTK_neu_2016.jpg" height="10%" width="30%"></a> DKTK 2022
+    </footer>
+</body>
+
+</html>
--- a/lib/generate.sh
+++ b/lib/generate.sh
@@ -1,6 +1,6 @@
 #!/bin/bash

-cat > ../landing/index.html <<EOL
+cat > ./landing/index.html <<EOL
 <html lang="en">

 <head>
--- a/lib/prerequisites.sh
+++ b/lib/prerequisites.sh
@@ -4,7 +4,7 @@
 ## Check if user is a su
 echo "Welcome to the starting a bridgehead. We will get your instance up and running in no time"
 echo "First we will check if all prerequisites are met ..."
-prerequisites="git docker docker-compose cat"
+prerequisites="git docker docker-compose"
 for prerequisite in $prerequisites; do
  $prerequisite --version 2>&1
  is_available=$?
--- a/nngm/docker-compose.yml
+++ b/nngm/docker-compose.yml
@@ -0,0 +1,85 @@
+version: "3.7"
+
+services:
+  traefik:
+    container_name: bridgehead-traefik
+    image: traefik:2.4
+    command:
+      - --api.insecure=true
+      - --entrypoints.web.address=:80
+      - --entrypoints.websecure.address=:443
+      - --providers.docker=true
+      - --entrypoints.web.http.redirections.entrypoint.to=websecure
+      - --entrypoints.web.http.redirections.entrypoint.scheme=https
+    ports:
+      - 80:80
+      - 443:443
+      - 8080:8080
+    volumes:
+      - ../certs:/tools/certs
+      - /var/run/docker.sock:/var/run/docker.sock:ro
+    extra_hosts:
+      - "host.docker.internal:host-gateway"
+
+  ### Does need to know the outside proxy to connect central components
+  forward_proxy:
+    container_name: bridgehead-squid
+    image: ubuntu/squid
+    environment:
+      http_proxy: ${http_proxy}
+      https_proxy: ${https_proxy}
+    volumes:
+      - "bridgehead-proxy:/var/log/squid"
+    
+## Needs internal proxy config
+  landing:
+    container_name: bridgehead-landingpage
+    image: nginx:stable
+    volumes:
+      - ../landing/:/usr/share/nginx/html
+    labels:
+      - "traefik.enable=true"
+      - "traefik.http.routers.landing.rule=PathPrefix(`/`)"
+      - "traefik.http.services.landing.loadbalancer.server.port=80"
+      - "traefik.http.routers.landing.tls=true"
+
+
+  nngm-connector:
+      container_name: bridgehead-nngm-connector
+      image: "samply/share-client:nngm-feature-environmentPreconfiguration"
+      environment:
+        POSTGRES_PASSWORD: ${POSTGRES_PASSWORD}
+        NNGM_MAGICPL_APIKEY: ${NNGM_MAGICPL_APIKEY}
+        NNGM_MAINZELLISTE_APIKEY: ${NNGM_MAINZELLISTE_APIKEY}
+        NNGM_CTS_APIKEY: ${NNGM_CTS_APIKEY}
+        NNGM_CRYPTKEY: ${NNGM_CRYPTKEY}
+      volumes:
+        - "nngm-connector-logs:/usr/local/tomcat/logs"
+      labels:
+        - "traefik.enable=true"
+        - "traefik.http.routers.nngm_connector.rule=PathPrefix(`/nngm-connector`)"
+        - "traefik.http.services.nngm_connector.loadbalancer.server.port=8080"
+        - "traefik.http.routers.nngm_connector.tls=true"
+
+      depends_on:
+        - "nngm-connector-db"
+        - "forward_proxy"
+      ports:
+      - 5005:5005
+      restart: "always"
+
+  nngm-connector-db:
+      container_name: bridgehead-nngm-connector-db
+      image: "postgres:10.17"
+      environment:
+        POSTGRES_DB: "share_v2"
+        POSTGRES_USER: "samplyweb"
+        POSTGRES_PASSWORD: ${POSTGRES_PASSWORD}
+      volumes:
+        - "nngm-connector-db-data:/var/lib/postgresql/data"
+      restart: "always"
+
+volumes:
+  nngm-connector-db-data:
+  nngm-connector-logs:
+  bridgehead-proxy: