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missing Sites env error

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This commit is contained in:
martin.jurk
2025-11-25 15:48:02 +01:00
parent 02a3a87ebd
commit cdbc25270a
3 changed files with 7 additions and 4 deletions
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1
itcc/docker-compose.yml
View File

@@ -34,6 +34,7 @@ services:
EPSILON: 0.28 EPSILON: 0.28
QUERIES_TO_CACHE: '/queries_to_cache.conf' QUERIES_TO_CACHE: '/queries_to_cache.conf'
ENDPOINT_TYPE: ${FOCUS_ENDPOINT_TYPE:-blaze} ENDPOINT_TYPE: ${FOCUS_ENDPOINT_TYPE:-blaze}
RUST_LOG: trace
volumes: volumes:
- /srv/docker/bridgehead/itcc/queries_to_cache.conf:/queries_to_cache.conf:ro - /srv/docker/bridgehead/itcc/queries_to_cache.conf:/queries_to_cache.conf:ro
depends_on: depends_on:

9
itcc/modules/itcc-omics-ingest.yaml
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@@ -1,15 +1,16 @@
services: services:
omics-endpoint: omics-endpoint:
build: . build: .
image: samply/itcc-omics-ingest:workflow image: ghcr.io/samply/itcc-omics-ingest:workflow
ports: ports:
- "8080:8040" - "6080:6080"
environment: environment:
- UPLOAD_DIR=/data/uploads - UPLOAD_DIR=/data/uploads
- RUST_LOG=trace
volumes: volumes:
- ./uploads:/data/uploads - ./uploads:/data/uploads
labels: labels:
- "traefik.http.routers.omics.rule=Host(`${HOST}`) && PathPrefix(`/omics`)" - "traefik.http.routers.omics.rule=Host(`${HOST}`) && PathPrefix(`/api`)"
- "traefik.enable=true" - "traefik.enable=true"
- "traefik.http.services.omics.loadbalancer.server.port=8040" - "traefik.http.services.omics.loadbalancer.server.port=6080"
- "traefik.http.routers.omics.tls=true" - "traefik.http.routers.omics.tls=true"

1
itcc/vars
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@@ -7,6 +7,7 @@ SUPPORT_EMAIL=arturo.macias@dkfz-heidelberg.de
PRIVATEKEYFILENAME=/etc/bridgehead/pki/${SITE_ID}.priv.pem PRIVATEKEYFILENAME=/etc/bridgehead/pki/${SITE_ID}.priv.pem
BROKER_URL_FOR_PREREQ=$BROKER_URL BROKER_URL_FOR_PREREQ=$BROKER_URL
PUBLIC_ENVIRONMENT=prod PUBLIC_ENVIRONMENT=prod
SITES=itcc-inform,itcc-ither,itcc-mappyacts,itcc-profyle,itcc-smpaeds,itcc-zero
for module in $PROJECT/modules/*.sh for module in $PROJECT/modules/*.sh
do do