Commit Graph

103 Commits

Author SHA1 Message Date
David Croft
2bea154151 Got rid of the ^Ms at the end of the lines in these files 2025-04-30 14:40:39 +02:00
David Croft
5e621641ae Control import from Directory, improve README
Two new environment variables have been introduced, to allow a user to control
which data (if any) is imported from the Directory during a sync operation.
This was considered necessary, because recent changes to Directory sync have
greatly expanded the data that can be imported.

This was documented in the README, and the oportunity was taken to improve the
existing documentation, especially by peoviding a list of all available
environment variables for Directory sync.
2025-04-30 14:16:56 +02:00
Jan
82ced89b33 chore: unify blaze versioning and upgrade to 0.32 (#277) 2025-03-12 12:52:00 +01:00
patrickskowronekdkfz
3d1105b97c Update: Blaze to version 0.31 (#260) 2025-01-21 09:28:47 +01:00
Enola Knezevic
eea17c3478 fix: remove invalid beam-proxy tag and add it to focus instead (#242) 2024-10-22 16:48:48 +02:00
Pierre Delpy
cf5230963c feat: add focus tags in ccp and bbmri (#240)
Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
2024-10-21 11:00:01 +02:00
patrickskowronekdkfz
3312ca8a64 feat: added blaze cql cache (#236) 2024-10-10 14:34:28 +02:00
Pierre Delpy
c585322ee7 Merge pull request #226 from samply/main
Update Develop from Main
2024-09-12 08:22:17 +02:00
lablans
18c9e1bb30 Remove DP statement already present in readme. 2024-08-15 11:43:14 +00:00
lablans
de847f309c Provide defaults 2024-08-15 11:40:44 +00:00
DavidCroftDKFZ
3496fa7a0f Let Directory sync handle connection with Blaze
Remove the delayed start, because Directory sync will automatically keep trying to
connect to Blaze if not initially present.
2024-08-15 13:36:57 +02:00
DavidCroftDKFZ
95574f38be Included Blaze dependency 2024-08-15 10:33:28 +02:00
DavidCroftDKFZ
b8b81b1242 Fixed environment variable passing for Directory sync
There were problems with the passing of environment variables from
bbmri.conf to the Directory synce container:

* The Directory password variable was misspellt.
* Some useful variables were missing.

Additionally, a delay was added before launching Directory sync,
to give Blaze time to start up.
2024-08-15 09:17:34 +02:00
Martin Lablans
4ab10ff71d In ENVIRONMENT=production, use main tag for Samply.Beam. 2024-07-29 13:50:30 +02:00
DavidCroftDKFZ
8942b923b3 Added comment for consistency with Directory Sync README 2024-07-26 09:57:40 +02:00
DavidCroftDKFZ
3f8bb158bc Merge branch 'main' into main_directory_sync_extra_attributes_and_star_model 2024-07-25 16:54:47 +02:00
Torben Brenner
f7751b9d92 fix: set blaze to version 0.28
The 0.28 release is not downgradeable, therefore switching again to 0.28
2024-06-28 14:29:56 +02:00
janskiba
e72c996952 feat: allow setting focus retry count and increase default 2024-06-13 07:29:54 +00:00
patrickskowronekdkfz
fe3fc6204a Revert "GBN maintenance mode" 2024-04-18 11:01:04 +02:00
Patrick Skowronek
1afbf88a76 fix: use only bbmri broker 2024-04-16 09:23:42 +02:00
Patrick Skowronek
94b2c29bc7 GBN maintenance mode 2024-04-15 08:31:57 +02:00
patrickskowronekdkfz
4fac079aec Merge branch 'main' into feature/datashield 2024-03-19 09:52:40 +01:00
djuarezgf
480bbe04e7 Changed: TEILER_DEFAULT_LANGUAGE 2024-03-18 16:47:40 +01:00
Torben Brenner
a87e9b9284 Merge pull request #154 from samply/refactor/blazePerformanceTuning
Optimize memory usage of Blaze
2024-03-15 09:55:34 +01:00
Torben Brenner
eeb17e7bfe feat: added optional resource cache cap 2024-03-08 13:33:30 +01:00
Croft
8104711075 Allow user to push star model facts to Directory
This takes advantage of new functionality added to Directory sync.

Defaults to false.
2024-03-06 11:26:07 +01:00
Torben Brenner
3777d4bf05 Add default value for BLAZE_MEMORY_CAP
Co-authored-by: Tobias Kussel <TKussel@users.noreply.github.com>
2024-03-05 10:35:16 +01:00
juarez
dcddbf2235 Bugfix: Add version of docker-compose 2024-02-27 12:44:26 +01:00
juarez
e182e2fbe6 Remove unnecessary version of docker-compose.override files 2024-02-27 12:43:23 +01:00
Torben Brenner
7d07c0623d refactor: optimize memory usage of blaze 2024-02-20 15:27:00 +01:00
Martin Lablans
f367a406bb Remove DNPM code from BBMRI 2024-02-20 10:47:42 +01:00
Tobias Kussel
aac31945a3 Add dnpm echo to dnpm-compose 2024-02-19 08:50:15 +00:00
Martin Lablans
5ba1a1a820 Fix variable visibility 2024-01-09 11:47:02 +01:00
Patrick Skowronek
c4018aae08 fixed gbn broker url 2024-01-09 07:53:44 +01:00
Enola Knezevic
417c158435 GBN broker IDs 2024-01-08 16:26:07 +01:00
Enola Knezevic
00030a6141 GBN variable names 2024-01-08 16:15:46 +01:00
Martin Lablans
29fb0e7099 Use focus tag depending on ENVIRONMENT 2024-01-08 15:49:46 +01:00
Martin Lablans
00cae67fa1 Add missing switch-case for gbn 2024-01-08 15:49:28 +01:00
Martin Lablans
2074461ee7 Use new variable ENVIRONMENT in /etc/bridgehead; defaults to "production". 2024-01-08 13:03:12 +01:00
Patrick Skowronek
954d46efb1 Added test root certs and logic for beam to use test brokers 2024-01-05 11:58:42 +01:00
Tobias Kussel
a80a980cea Merge pull request #140 from samply/feature/dnpm-node
Feature/dnpm node
2023-12-18 10:53:39 +01:00
Tobias Kussel
f66f2755d8 Change landing page path override to /landing 2023-12-15 13:32:00 +00:00
Tobias Kussel
d28a3ac889 Add dnpm node module to bbmri project 2023-12-15 09:46:40 +00:00
Tobias Kussel
c02da838c7 Cleanup dnpm connect module 2023-12-15 09:41:11 +00:00
janskiba
a4ce7f4eb6 Fix subsitution 2023-09-22 07:35:05 +00:00
janskiba
49b5cb976a Use GBN Broker for timesync if ERIC is disabled 2023-09-22 07:25:04 +00:00
patrickskowronekdkfz
6b1ea4c74e Update gbn-setup.sh 2023-09-04 15:54:22 +02:00
Patrick Skowronek
8c8ebb9298 Added gbn broker url and e-mail 2023-09-04 15:30:44 +02:00
patrickskowronekdkfz
0536023ceb Merge pull request #117 from samply/feature/bbmri_de
Added broker.bbmri.de root cert
2023-09-04 14:44:38 +02:00
Patrick Skowronek
3a3a9d09a9 Added broker.bbmri.de root cert 2023-09-04 14:30:52 +02:00