Commit Graph

  • 2aba826388 fix: adapt to transfair cli changes transfair-cli janskiba 2025-06-16 13:13:35 +00:00
  • b4a788e010 docs: close Exporter code block in readme (#318) develop Tobias Kussel 2025-06-16 14:23:59 +02:00
  • 1a714e28ac Added: Teiler documentation feature/exporter-docu David Juarez 2025-06-11 15:35:12 +02:00
  • 39a02e2b2f Added: Teiler documentation David Juarez 2025-06-11 13:38:19 +02:00
  • 66fe90ff98 Merge pull request #314 from samply/develop main Jan 2025-06-11 11:29:09 +02:00
  • c33fbfc8bc fix: Create Exporter User only if Exporter is enabled (#317) djuarezgf 2025-06-11 09:34:41 +02:00
  • faa8abd4ee chore: update eric.acc.root.crt.pem (#316) Enola Knezevic 2025-06-10 16:48:22 +02:00
  • 7693289d4d docs: add Teiler and Exporter to the main README.md (#315) djuarezgf 2025-06-10 11:03:18 +02:00
  • 02954c1ef4 Test test/teiler-dashboard David Juarez 2025-06-05 17:03:46 +02:00
  • d482324361 feat: add Teiler and Exporter in BBMRI (#312) djuarezgf 2025-06-05 16:55:03 +02:00
  • b7a42f3d3b chore: externalize POSTGRES_TAG and bump postgres to 15.13 (#313) Martin Lablans 2025-06-04 14:22:34 +02:00
  • e9b27c4368 feature: enable pscc bh within cce project feature/add-pscc p.delpy@dkfz-heidelberg.de 2025-06-02 10:23:01 +02:00
  • cee02dbbaa Test feature/authentik David Juarez 2025-05-30 17:07:31 +02:00
  • 359d1e19d3 Change: Authentik instead of Keycloak in CCP David Juarez 2025-05-30 16:43:26 +02:00
  • 8ff1e41836 Remove OIDC configuration in BBMRI David Juarez 2025-05-27 17:35:26 +02:00
  • 7c5bbefe74 Add BBMRI broker configuration David Juarez 2025-05-26 14:53:57 +02:00
  • 65961f6bdf Merge remote-tracking branch 'origin/feature/add-pscc' into feature/add-pscc Pierre Delpy 2025-05-27 08:25:37 +02:00
  • 5a9f44474e chore: temp disable blaze-auth Denis Köther 2025-05-08 15:47:28 +02:00
  • b6ef7d63cf fix: fixed lens image path Denis Köther 2025-05-08 15:13:45 +02:00
  • a6d48931e3 fix: docker image Denis Köther 2025-05-05 13:51:57 +02:00
  • ec92140b76 fix: added pscc in prepare-system,lens-compose and bridgehead Denis Köther 2025-04-30 16:06:28 +02:00
  • 5ef4a1701e feat: add pscc project Pierre Delpy 2025-04-04 09:58:25 +02:00
  • 92ea700ea6 Add Teiler and Exporter to BBMRI David Juarez 2025-05-26 13:48:06 +02:00
  • 775a459e58 Adapt changes in teiler, exporter and reporter for CCP feature/teiler-for-ccp-and-bbmri David Juarez 2025-05-26 12:55:18 +02:00
  • 923faaea85 Remove conf in teiler backend David Juarez 2025-05-26 10:28:46 +02:00
  • 1981eb6037 some changes after SFTPing to my machine enola DKFZ 2025-05-23 18:12:45 +02:00
  • d068b1c6df Teiler in BBMRI David Juarez 2025-05-22 14:30:30 +02:00
  • a765f6619f exporter, reporter, teiler, auth for them enola DKFZ 2025-05-23 16:16:22 +02:00
  • 8652b7c7ea Test docker image for bbmri teiler-dashboard djuarezgf 2024-10-30 13:04:43 +01:00
  • b8c8db2ffc Test image djuarezgf 2024-10-30 12:04:20 +01:00
  • 52e0a7cd13 Added: Exporter and Teiler for BBMRI djuarezgf 2024-10-30 11:58:27 +01:00
  • f3166641a0 fix for the fix of the fix Torben Brenner 2024-10-17 15:35:01 +02:00
  • ffaa8922ba some more adjustments Torben Brenner 2024-10-17 15:32:10 +02:00
  • fc0028a14d fix: add postgres tag version Torben Brenner 2024-10-17 15:24:27 +02:00
  • 05cc2d49ed breakmorestuff: hardcoded ccp in modules Torben Brenner 2024-10-17 15:23:04 +02:00
  • 53be4c09d6 fix: disable secret sync for now Torben Brenner 2024-10-17 15:15:23 +02:00
  • 0540957120 fix: added variables for secret sync Torben Brenner 2024-10-17 15:08:50 +02:00
  • 1e5dd36912 feat: enable exporter and teiler module in bbmri Torben Brenner 2024-10-17 14:54:47 +02:00
  • ae80e6bb9d Bugfix: teiler backend secret qr-bbmri-v2 David Juarez 2025-05-23 18:09:08 +02:00
  • 1f9c29647a fix: use RECEIVER_PROXY_ID instead of $1 prototype/beamFile Torben Brenner 2025-05-23 16:39:24 +02:00
  • 7cd430ffd2 fix: added missing -f arg Torben Brenner 2025-05-23 16:35:01 +02:00
  • 78e572d0db fix: don't attach to network use project instead Torben Brenner 2025-05-23 16:33:42 +02:00
  • b0507a7946 fix: add beam-send to project network Torben Brenner 2025-05-23 16:32:17 +02:00
  • 791be147e2 fix: make a persistent send secret per bridgehead Torben Brenner 2025-05-23 16:30:28 +02:00
  • bc0835ff4d refactor: beam file send is only an executable command Torben Brenner 2025-05-23 16:21:10 +02:00
  • 96d99b2510 feat: added commands for beam-file send mode Torben Brenner 2025-05-23 16:01:08 +02:00
  • 663ae628f3 fix: pass outdir path as separate token Torben Brenner 2025-05-23 15:52:20 +02:00
  • 91b9eeb316 fix: added quotes to data directory option Torben Brenner 2025-05-23 15:50:43 +02:00
  • 3146a64fb7 fix: now properly reading variables for the check Torben Brenner 2025-05-23 15:48:09 +02:00
  • 7064bc6bf9 prototype: module for beam-file Torben Brenner 2025-05-23 15:27:23 +02:00
  • fd013232f5 Cache public organoid dashboard SQL query (#309) Tim Schumacher 2025-05-23 15:26:59 +02:00
  • eb52554892 docs: add faq (#288) DavidCroftDKFZ 2025-05-22 18:10:40 +02:00
  • 08c695e960 docs: Control import from Directory, improve README (#297) DavidCroftDKFZ 2025-05-22 18:03:01 +02:00
  • 1513fe1c6c Added section relating to clearing data from Blaze (#303) DavidCroftDKFZ 2025-05-22 18:01:43 +02:00
  • 6476529abd Teiler in BBMRI David Juarez 2025-05-22 14:30:30 +02:00
  • 371ee5ad76 Test test/exporter-no-python David Juarez 2025-05-21 16:43:32 +02:00
  • 23106dfbcf Test David Juarez 2025-05-21 16:35:50 +02:00
  • 03b520bfcc Merge pull request #308 from samply/develop Jan 2025-05-21 15:45:39 +02:00
  • af08a9fb08 chore: change some teiler variables (#307) djuarezgf 2025-05-20 16:24:24 +02:00
  • 4082292f99 Merge pull request #306 from samply/develop Jan 2025-05-20 11:52:02 +02:00
  • b95f0efbe7 fix: add own url to teiler dashboard to make it offline compatible (#305) djuarezgf 2025-05-20 09:39:14 +02:00
  • 99567e2b40 fix: Ensure transfair can properly communicate with the fhir server for requests (#304) Torben Brenner 2025-05-19 17:01:37 +02:00
  • 96ff6043a1 feat: allow transfair to talk to services behind the proxy (#296) Jan 2025-05-09 13:52:33 +02:00
  • 844ce3386e chore(transfair): update transfair config (#298) Jan 2025-05-09 11:30:26 +02:00
  • e22ac4b066 Merge pull request #300 from samply/develop Martin Lablans 2025-05-09 09:31:47 +02:00
  • ec2c61b308 Martin's change cherry-pick-tmp-pr Tim Schumacher 2025-05-09 09:23:20 +02:00
  • 0cdd5f371b Use temp directory for secret sync cache Tim Schumacher 2025-05-07 14:15:25 +02:00
  • 59bdafbb52 chore: temp disable blaze-auth Denis Köther 2025-05-08 15:47:28 +02:00
  • 8ec28adbd2 fix: fixed lens image path Denis Köther 2025-05-08 15:13:45 +02:00
  • 9782bf66b6 Code review: Move to /tmp/bridgehead/... Martin Lablans 2025-05-07 16:13:16 +02:00
  • 87f0e8ad7f Use temp directory for secret sync cache Tim Schumacher 2025-05-07 14:15:25 +02:00
  • 72565eb394 fix: docker image Denis Köther 2025-05-05 13:51:57 +02:00
  • 7b42066808 fix: added pscc in prepare-system,lens-compose and bridgehead Denis Köther 2025-04-30 16:06:28 +02:00
  • d9921568fc test: use batch import branch of oBDS2FHIR-REST test/obds2fhir-batch-import p.delpy@dkfz-heidelberg.de 2025-05-02 14:41:09 +02:00
  • 7365be3e7b chore(transfair): add option to disable tls verification (#295) Jan 2025-04-17 12:01:45 +02:00
  • c5d08c50a4 chore: add BBMRI ERIC acceptance env (#294) Enola Knezevic 2025-04-16 15:37:55 +02:00
  • 72ecaadba8 fix: ssh-tunnel-setup.sh (#293) Jan 2025-04-15 11:36:20 +02:00
  • cd38957dd7 Merge pull request #289 from samply/develop Jan 2025-04-15 10:17:11 +02:00
  • 2ddd535794 feat: ssh tunnel (#292) Jan 2025-04-14 10:45:15 +02:00
  • 324c2b336d Merge pull request #287 from tm16-medma/patch-1 ovis Torben Brenner 2025-04-14 08:19:20 +02:00
  • 973547c322 chore(transfair): add new gw option (#291) Jan 2025-04-11 08:37:31 +02:00
  • e8cb85eade adjusted traefik parameters tm16-medma 2025-04-09 14:00:39 +00:00
  • c59c425ad4 Merge branch 'patch-1' of https://github.com/tm16-medma/bridgehead into patch-1 tm16-medma 2025-04-09 13:45:01 +00:00
  • e3f7f5d32b Refactor Docker Compose tm16-medma 2025-04-09 13:43:53 +00:00
  • 6b649c9233 feat: expose transfair via traefik (#290) Jan 2025-04-09 13:19:52 +02:00
  • 752ca6a15c feat: add pscc project Pierre Delpy 2025-04-04 09:58:25 +02:00
  • 1b01bd81ff Updated the fhir-transformer image and init_onco container to sleep after finishing tm16-medma 2025-04-03 15:04:01 +02:00
  • 86a2b78d8f corrected a syntax error tm16-medma 2025-04-01 10:57:02 +00:00
  • cf1ba43d39 refactor: restructure ovis-compose.yml and added MongoDB initialization to sh tm16-medma 2025-04-01 10:46:48 +00:00
  • 3144ee5214 Fix GitLab token syncing for BBMRI Tim Schumacher 2025-03-18 11:42:53 +01:00
  • 68804dc71b feat: add transfair setup to ccp janskiba 2025-03-19 08:13:08 +00:00
  • e5aebfe382 chore!: update transfair config janskiba 2025-03-17 09:29:52 +00:00
  • 3b49faaeb4 Update ovis-compose.yml tm16-medma 2025-03-26 11:21:58 +01:00
  • 82841a6f04 Fix airgapped-blaze-compose.yml file. test/airgapped-blaze Manoj Waikar 2025-03-25 15:23:16 +01:00
  • ba6f2c3b11 Modify container name (as it was a duplicate). Manoj Waikar 2025-03-24 09:50:06 +01:00
  • 39a4231c1f Add airgapped-blaze-{compose,setup} files in cce modules. Manoj Waikar 2025-03-21 15:15:03 +01:00
  • d9d6a8acb3 Fix GitLab token syncing for BBMRI pr-secret-sync-gitlab-bbmri Tim Schumacher 2025-03-18 11:42:53 +01:00
  • 4ef585bfc5 Merge pull request #281 from samply/develop Jan 2025-03-17 10:02:58 +01:00
  • 6f3aba1eaa feat: support self-signed cert on ttp (#283) Torben Brenner 2025-03-12 15:45:55 +01:00
  • 82ced89b33 chore: unify blaze versioning and upgrade to 0.32 (#277) Jan 2025-03-12 12:52:00 +01:00