Commit Graph

  • 87bc6fada3 allow /ccp-ovis* urls ovis Skiba Jan 2026-03-30 16:34:44 +02:00
  • c504cddff0 Update OVIS frontend configuration in ovis-compose.yml tm16-medma 2026-03-30 16:05:44 +02:00
  • 14f7e74c8a Merge pull request #377 from samply/develop main Enola Knezevic 2026-03-30 15:47:05 +02:00
  • 04757fbc76 Add APP_DOMAIN environment variable to OVIS services in ovis-compose.yml tm16-medma 2026-03-30 13:40:30 +02:00
  • 5099fdbaf4 Refactor Traefik middleware configuration for OVIS services in ovis-compose.yml tm16-medma 2026-03-30 13:29:17 +02:00
  • 9ca6d0f178 auto generate ovis cookie secret Skiba Jan 2026-03-27 10:13:50 +01:00
  • f304a40d68 secure db and ml feature/ml-itcc Martin Jurk 2026-03-27 08:10:48 +01:00
  • c8bb9259db Remove unused CA certificate handling from OVIS setup script and compose file tm16-medma 2026-03-26 17:03:53 +01:00
  • d010ad8bcb Refine OVIS CA file handling and logging in setup script tm16-medma 2026-03-26 16:28:09 +01:00
  • 875ce8d71a Add detailed logging for OVIS module initialization in setup script tm16-medma 2026-03-26 16:18:50 +01:00
  • 3cb1d70416 Enhance OVIS setup script to handle missing CA directory and refine logging tm16-medma 2026-03-26 16:16:21 +01:00
  • fd2cf2dead Add custom CA file support for OVIS oauth2-proxy in setup script and compose file tm16-medma 2026-03-26 15:41:03 +01:00
  • 1e1d0e99d0 Add ovis oidc redirect path Tobias Kussel 2026-03-26 13:25:47 +01:00
  • aa97a863bd teswt socket and task Martin Jurk 2026-03-26 12:12:59 +01:00
  • 8e52874b5f Update OVIS frontend image reference in ovis-compose.yml tm16-medma 2026-03-26 12:07:47 +01:00
  • 80f1479818 Update traefik dashboard routing rules fix/traefik-dashboard-route Tobias Kussel 2026-03-26 10:39:36 +01:00
  • e2103666ce Update Traefik service configuration for OVIS frontend in ovis-compose.yml tm16-medma 2026-03-26 10:06:49 +01:00
  • f6ba693b25 Comment out middleware configuration for OVIS frontend in ovis-compose.yml. This change temporarily disables the integration of the slash-redirect and prefix-strip middlewares for the ovis-frontend-ccp router, allowing for further testing and adjustments. tm16-medma 2026-03-26 10:05:32 +01:00
  • d4a2f72f91 Update Traefik middleware configuration for OVIS frontend in ovis-compose.yml tm16-medma 2026-03-26 09:28:39 +01:00
  • 91dcc3f18e Add environment variables for OVIS frontend in ovis-compose.yml tm16-medma 2026-03-26 09:24:24 +01:00
  • 55d629c343 Add oauth2-proxy middleware for OVIS services in ovis-compose.yml tm16-medma 2026-03-26 09:04:42 +01:00
  • d955627da7 Update OVIS frontend image reference in ovis-compose.yml tm16-medma 2026-03-23 13:26:06 +01:00
  • e292a67ded refactor: simplify OVIS frontend Traefik routing to single CCP router Collapse the /ccp-ovis slash-redirect and prefix-strip flow into one ovis-frontend-ccp router by attaching both middlewares in order (redirect, then strip). This removes redundant router labels while preserving canonical /ccp-ovis -> /ccp-ovis/ behavior and mounted-path forwarding to the frontend service. tm16-medma 2026-03-23 13:11:27 +01:00
  • 014933ab61 Cleanup FHIR configuration in ovis-compose.yml tm16-medma 2026-03-23 12:33:40 +01:00
  • 6ef1fb7b87 Clean up proxy settings in ovis-compose.yml tm16-medma 2026-03-23 12:32:16 +01:00
  • 191f5f24da refactor: align Bridgehead OVIS CCP overlay with upstream runtime contracts Apply the PR #375 review feedback by removing Bridgehead-specific compose/setup overrides that duplicated upstream OVIS behavior and by switching to the upstream-built Mongo image that already contains init logic. - rename CCP OVIS services to consistent upstream-style names (ovis-*) and update internal dependencies - switch Mongo service image from direct mongo:latest + host-mounted init script to docker.verbis.dkfz.de/ovis/ovis-backend-mongodb:latest - remove obsolete Mongo init bind mount (/docker-entrypoint-initdb.d/init.js) from compose - drop redundant runtime overrides from compose (restart, command, user, working_dir) - remove duplicated app-default/preprocessor env overrides (OVIS_PREPROC_*, misc backend defaults) and keep deployment wiring only - fix Mongo connection env usage to ADDRESS and point services to ovis-backend-database-mongodb - remove temporary root-compat Traefik redirect shim and keep mounted /ccp-ovis routing labels - remove setup-time generation of Mongo init.js and related cache directory prep from ccp/modules/ovis-setup.sh tm16-medma 2026-03-23 11:28:27 +01:00
  • 921bac11d2 Update Traefik rules in ovis-compose.yml tm16-medma 2026-03-19 10:18:04 +01:00
  • b7f787890e Remove blaze service dependency from ovis-compose.yml tm16-medma 2026-03-18 16:43:00 +01:00
  • 1755298c07 Add dependency condition for blaze service tm16-medma 2026-03-18 16:19:18 +01:00
  • 1981a08a30 Clear FHIR_USERNAME and FHIR_PASSWORD tm16-medma 2026-03-18 14:34:39 +01:00
  • 72021fefc4 Update ovis-compose.yml for backend image and import settings tm16-medma 2026-03-18 13:03:48 +01:00
  • 3d4f2a4fea Add Traefik labels for ovis-frontend routing tm16-medma 2026-03-18 12:46:59 +01:00
  • 47b5bb0d80 Clean up Traefik router settings in ovis-compose.yml tm16-medma 2026-03-18 12:46:06 +01:00
  • 87e8c786ae Add Traefik labels for ovis-frontend routing tm16-medma 2026-03-18 12:31:20 +01:00
  • 1a0d12f1a4 Add Traefik labels for ovis-backend services tm16-medma 2026-03-18 12:04:24 +01:00
  • 57308d0c2c Add Traefik labels for ovis-frontend-ccp routes tm16-medma 2026-03-18 11:46:07 +01:00
  • fb027b79e5 Add OVIS_PUBLIC_BASE_PATH environment variable tm16-medma 2026-03-18 10:47:16 +01:00
  • d1624c1068 fix treafik routers Skiba Jan 2026-03-18 09:38:41 +01:00
  • f3009f347e Refactor ovis-compose.yml to add new services tm16-medma 2026-03-17 15:59:15 +01:00
  • bbda99254f feature: add osiris2fhir in cce and minor fixes (#374) develop Pierre Delpy 2026-03-17 15:54:25 +01:00
  • d386766e13 Merge branch 'develop' into ovis Skiba, Jan 2026-03-17 15:38:01 +01:00
  • 5e9590736b feature: add osiris2fhir in cce and minor fixes feature/cce-enable-osiris2fhir Pierre Delpy 2026-03-17 13:35:58 +01:00
  • a14da73ccc add additional credential encoding for curl fix/alternative-proxy-handling Tobias Kussel 2026-03-05 14:31:05 +01:00
  • 467613ad31 fix proxy credential escaping Tobias Kussel 2026-03-05 14:21:37 +01:00
  • 82ee757e17 Use new proxy escaping and forward-proxy test image Tobias Kussel 2026-03-04 09:26:22 +01:00
  • 4c8f7cb119 Refactor OVIS setup script for MongoDB initialization tm16-medma 2026-03-02 09:14:39 +01:00
  • 28a93b191c Refactor ovis-compose.yml for latest OVis version tm16-medma 2026-03-02 09:14:05 +01:00
  • c1de9b8314 WIP: enable osiris2fhir in PSCC for GR (#372) Pierre Delpy 2026-02-24 12:09:39 +01:00
  • 0c92ddaa1b beam sockets Martin Jurk 2026-02-23 16:14:25 +01:00
  • 9d3ec957a2 Activate Directory token login (#371) DavidCroftDKFZ 2026-02-20 09:27:47 +01:00
  • 0740452150 test server ip Martin Jurk 2026-02-17 13:35:42 +01:00
  • 0ecb93027f maizelliste env db Martin Jurk 2026-02-16 18:08:52 +01:00
  • 4658a115c2 clean up Martin Jurk 2026-02-16 10:31:54 +01:00
  • d8a1920ef9 ingest component test Martin Jurk 2026-02-16 09:32:32 +01:00
  • 7a9f80537b sites moved to etc itcc.comf (#369) Martin Jurk 2026-02-10 16:04:33 +01:00
  • bff06a6bb0 fix kr deployment (#370) Pierre Delpy 2026-02-10 11:21:36 +01:00
  • ae1d184c9c db name chaged Martin Jurk 2026-02-06 10:53:37 +01:00
  • 72634ec69d fix image martin.jurk 2026-02-06 10:34:59 +01:00
  • e5fa8d044d volume Martin Jurk 2026-02-05 16:38:28 +01:00
  • 017620e870 mainzelliste test Martin Jurk 2026-02-05 16:29:38 +01:00
  • d83e58ae7f sites moved to etc itcc.comf Martin Jurk 2026-02-05 07:28:59 +01:00
  • 6923ead6ce feat: itcc lens2 (#365) Martin Jurk 2026-01-28 14:28:09 +01:00
  • fae2f29cef Changes to make deployed CCE explorer work properly. (#368) test/airgapped-blaze Manoj Waikar 2026-01-13 10:42:10 +01:00
  • bfb37e5515 update beam proxy server used for oauth enrollment (#366) Jan 2025-12-11 11:33:29 +01:00
  • 37a7e971ae test version blaze (#364) Enola Knezevic 2025-12-01 12:54:57 +01:00
  • c85339acca obfuscate BBMRI ERIC way, test blaze version (#363) Enola Knezevic 2025-12-01 12:50:07 +01:00
  • 4e0cf29348 Use the cce-explorer:main image from docker hub (instead of ghcr). (#362) Manoj Waikar 2025-11-21 14:52:42 +01:00
  • b1365bd939 feat: migrate pscc to orange cloud broker (#361) Pierre Delpy 2025-11-21 10:42:21 +01:00
  • b726af8907 Use the main image name for cce explorer. (#360) Manoj Waikar 2025-11-20 14:34:33 +01:00
  • 8abec14e0a Add APP_spot_KEY env var under the beam-proxy section. (#358) Manoj Waikar 2025-11-19 09:33:18 +01:00
  • 4dbc84efb5 feat(dnpm): set timezone to Europe/Berlin (#359) Niklas Reimer 2025-11-12 10:25:20 +01:00
  • 390f91d722 Directory sync: token login and cron change (#351) DavidCroftDKFZ 2025-11-11 09:43:08 +01:00
  • 92b03a868c feat: add nNGM project (#340) djuarezgf 2025-11-06 16:47:50 +01:00
  • fca56976e6 feat: add PSCC Pierre Delpy 2025-11-05 15:18:00 +01:00
  • e96b77bb77 Directory sync: inherit host timezone (#354) DavidCroftDKFZ 2025-11-05 11:02:26 +01:00
  • 790a90787e docs: add initial documentation for Samply.Exporter and Samply.Teiler (#350) djuarezgf 2025-10-20 11:16:41 +02:00
  • e1bcaaea3d Update focus tags: no project specific images anymore Tim Schumacher 2025-10-10 10:32:31 +02:00
  • 8f2fd1af1f fix: don't run secret sync for minimal (#349) Jan 2025-10-15 10:45:42 +02:00
  • e440945f34 feat: add bridgehead check command (#342) Jan 2025-09-30 11:47:51 +02:00
  • 54d6fec7d1 fix: only pass CQL_PROJECTS_ENABLED to focus if set (#344) Jan 2025-09-30 11:39:40 +02:00
  • 313c3f65b3 feat: allow cql queries for exliquid (#343) Jan 2025-09-30 11:01:14 +02:00
  • d2df758017 feat: add scout module (#339) Tim Schumacher 2025-09-02 13:23:34 +02:00
  • 6d7659c049 feat(dnpm): change to new api-gateway image (#337) Jan 2025-08-19 16:35:52 +02:00
  • 50ae129083 chore: add more options to transfair (#325) Jan 2025-08-19 16:32:41 +02:00
  • 31c588afc2 fix: adapt to transfair cli changes (#319) Jan 2025-08-19 15:48:05 +02:00
  • e728def9d4 Replace hardcoded image: ...:develop references with version variables (#335) djuarezgf 2025-07-30 11:21:10 +02:00
  • f4ed80a00c docs: Add ghcr.io to URL list (#321) Paul-Christian Volkmer 2025-07-25 10:58:56 +02:00
  • ed5f319d79 fix(dnpm): fix env subsitution (#333) Jan 2025-07-25 10:58:07 +02:00
  • 5ce1f6391b mtba: fallback to keycloak test server pending migration djuarezgf 2025-07-23 09:53:14 +02:00
  • 3589dede55 feat: migrate PSP to Authentik (#329) djuarezgf 2025-07-22 11:34:49 +02:00
  • 893f0332f9 feat(dnpm): allow setting custom dnpm image tag (#326) Jan 2025-07-07 15:36:14 +02:00
  • 1b15a31c1b Fixed: Authentik URL for Opal (#328) djuarezgf 2025-07-07 15:35:54 +02:00
  • 9b3a21b0c3 feat: migrate OIDC Configuration from Keycloak to Authentik (#327) djuarezgf 2025-07-04 14:26:19 +02:00
  • 7cfa81d821 feat: remove local rstudio (#322) Jan 2025-06-27 10:55:53 +02:00
  • 28fd775ba1 CCE Teiler and Export (#323) djuarezgf 2025-06-25 15:53:29 +02:00
  • 145b685d1c fix: add obfuscation and basic auth to spot in cce and itcc (#324) Pierre Delpy 2025-06-25 14:58:20 +02:00
  • 68b599e305 Use relative paths in teiler (#320) djuarezgf 2025-06-18 17:04:09 +02:00
  • 957514042c docs: close Exporter code block in readme (#318) Tobias Kussel 2025-06-16 14:23:59 +02:00
  • 99d76e7d08 fix: Create Exporter User only if Exporter is enabled (#317) djuarezgf 2025-06-11 09:34:41 +02:00
  • d911698986 chore: update eric.acc.root.crt.pem (#316) Enola Knezevic 2025-06-10 16:48:22 +02:00