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bridgehead
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162 Commits

Author SHA1 Message Date
juarez c4c4f743d2 Remove updater cron of teiler-core 2024-02-27 12:43:31 +01:00
juarez be9adcbfa2 Remove clean temp files configuration of exporter 2024-02-27 12:43:30 +01:00
juarez 10a362c237 Add explanation why is the volume of exporter-db currently so important for us. 2024-02-27 12:43:30 +01:00
juarez 75c86b79e8 Add Teiler Admin to Keycloak 2024-02-27 12:43:30 +01:00
juarez a6443a6857 Remove IS_DKTK_SITE 2024-02-27 12:43:30 +01:00
juarez f3745b973a User default user rstudio in rstudio 2024-02-27 12:43:30 +01:00
Martin Lablans 50d28d293f Generate DATASHIELD_CONNECT_SECRET automatically 2024-02-27 12:43:30 +01:00
Martin Lablans 44415369cc Update ccp/modules/datashield-compose.yml 2024-02-27 12:43:30 +01:00
Martin Lablans 9b8331ed28 Update ccp/modules/datashield-compose.yml 2024-02-27 12:43:30 +01:00
Martin Lablans 73d969e374 Use LDM_PASSWORD for all admin passwords 2024-02-27 12:43:30 +01:00
juarez 840096d1d5 Enable only if true 2024-02-27 12:43:29 +01:00
juarez 43c45f0628 Remove todo in rstudio 2024-02-27 12:43:29 +01:00
juarez e182e2fbe6 Remove unnecessary version of docker-compose.override files 2024-02-27 12:43:23 +01:00
juarez c8bafb2461 R-Server rock-base:6.3 2024-02-27 12:42:38 +01:00
juarez 0866cacc5a User postgres if docker.verbis.dkfz.de 2024-02-27 12:42:38 +01:00
juarez a1e76a61b8 Remove ports of beam-connect in datashield-compose.yml 2024-02-27 12:42:38 +01:00
juarez 09aa33c912 Generate passwords only if modules are enabled 2024-02-27 12:42:38 +01:00
juarez 36ac8d41c8 Add http scheme to exporter 2024-02-27 12:42:37 +01:00
janskiba c003999721 Migrate to new app key syntax 2024-02-27 12:42:37 +01:00
juarez 50360d3f41 update new broker 2024-02-27 12:42:37 +01:00
juarez 5148e3382d Add parameter LOG_FHIR_VALIDATION to exporter 2024-02-27 12:42:37 +01:00
juarez 2d7d1d73b3 Add reporter 2024-02-27 12:42:37 +01:00
janskiba 20c65336e6 Switch to `no-auth` branch of beam-connect 2024-02-27 12:42:37 +01:00
janskiba 276f886546 secrets are readonly by default 2024-02-27 12:42:37 +01:00
janskiba bc239c0b02 change to dockerhub image 2024-02-27 12:42:37 +01:00
janskiba 6438fc5f4e Change beam-connect version and load opal cert 2024-02-27 12:42:37 +01:00
janskiba f2f48869af Change cert permission and location 2024-02-27 12:42:36 +01:00
juarez e9e1ce5a65 ccp.conf in teiler-core as secret 2024-02-27 12:42:36 +01:00
juarez 687dbba383 Add opal certificate 2024-02-27 12:42:36 +01:00
juarez 5e376b17ad Remove unnecessary volumes 2024-02-27 12:42:36 +01:00
juarez 04cf5128b0 Remove mongo db 2024-02-27 12:42:36 +01:00
juarez 43ab59563c Add Opal Password in Exporter 2024-02-27 12:42:36 +01:00
Martin Lablans 996f53a164 expose beam connect ports 2024-02-27 12:42:36 +01:00
Martin Lablans b5ce188842 Fix beam connect app id 2024-02-27 12:42:36 +01:00
Martin Lablans 325ae1d574 beam connect and move beam-connect config 2024-02-27 12:42:36 +01:00
juarez 68782d1c32 Experiment 2024-02-27 12:42:35 +01:00
juarez dfde7c18ff Experiment 2024-02-27 12:42:35 +01:00
juarez 0b1e0474d7 Add DataSHIELD 2024-02-27 12:42:35 +01:00
juarez 72255e6211 Bugfix: cross origins of exporter 2024-02-27 12:42:35 +01:00
juarez 32de51eefb Merge id-management-setup with main 2024-02-27 12:42:35 +01:00
juarez 0cfe1d3617 Change salt string for exporter and login 2024-02-27 12:42:35 +01:00
juarez fe07c63f36 Adapt teiler-ui to traefik 2024-02-27 12:42:35 +01:00
juarez 3a91259a8a Add keycloak teiler app to teiler-ui 2024-02-27 12:42:35 +01:00
juarez 4bbd2a15fe Change volume names for teiler components 2024-02-27 12:42:35 +01:00
juarez 0a17bbc81f Add stripprefix to teiler-ui 2024-02-27 12:42:35 +01:00
juarez c794508880 Add stripprefix to teiler-core 2024-02-27 12:42:34 +01:00
juarez 3e0bf38018 Add forward strategy to teiler-core 2024-02-27 12:42:34 +01:00
juarez e2d109558d Add forward strategy to teiler-core 2024-02-27 12:42:34 +01:00
juarez 9299a201a6 Deactivate traffik for mtba 2024-02-27 12:42:34 +01:00
juarez c9b1975c9e Tidy teiler and mtba volumes 2024-02-27 12:42:34 +01:00
juarez 17f52a7907 Add Teiler Core 2024-02-27 12:42:34 +01:00
juarez 4d1a9bb701 Add Endpoint for Teiler 2024-02-27 12:42:34 +01:00
juarez efc04cea4f Update Teiler Core config 2024-02-27 12:42:34 +01:00
juarez 8fe03a6cd2 Add original Keycloak config 2024-02-27 12:42:34 +01:00
p.delpy@dkfz-heidelberg.de c66dac9881 update keykloak config 2024-02-27 12:42:33 +01:00
p.delpy@dkfz-heidelberg.de 38c7f3c24a beautiful config 2024-02-27 12:42:33 +01:00
juarez 49be101165 Rename teiler to exporter (bugfix) 2024-02-27 12:42:33 +01:00
juarez 6626f860a2 Rename teiler to exporter 2024-02-27 12:42:33 +01:00
juarez eb17d8c159 Configure login extern URLs 2024-02-27 12:42:33 +01:00
juarez 6340acdbe8 Bugfix: services in teiler-ui-compose.yml 2024-02-27 12:42:32 +01:00
juarez c916a357dc Change images of dktk-teiler and dktk-keycloak 2024-02-27 12:42:32 +01:00
juarez 20e2b2a0ed Add nngm and exliquid modules 2024-02-27 12:42:32 +01:00
juarez 2e6edb6179 Add Teiler UI and Teiler module 2024-02-27 12:42:32 +01:00
Tobias Kussel c58096aa27
Merge pull request #155 from samply/fix/dnpm-no-proxy 
Add DNPM_NO_PROXY configuration option
 2024-02-23 11:37:47 +01:00
Tobias Kussel 3f6e3a2bb4 mount and process trusted certs in dnpm-beam-connect 2024-02-22 15:41:11 +00:00
Tobias Kussel 9937002d06 Add DNPM_NO_PROXY configuration option 2024-02-21 15:04:00 +00:00
Tobias Kussel aac31945a3 Add dnpm echo to dnpm-compose 2024-02-19 08:50:15 +00:00
Martin Lablans 44ac09b9c1 Bump postgres version to 15.6 2024-02-09 16:58:02 +01:00
Martin Lablans ea51fc5910
Hotfix Pierre: Use version 1.0.0 for MTBA 2024-01-09 11:32:01 +01:00
Tobias Kussel a80a980cea
Merge pull request #140 from samply/feature/dnpm-node 
Feature/dnpm node
 2023-12-18 10:53:39 +01:00
Tobias Kussel f66f2755d8 Change landing page path override to /landing 2023-12-15 13:32:00 +00:00
Tobias Kussel c02da838c7 Cleanup dnpm connect module 2023-12-15 09:41:11 +00:00
Tobias Kussel 459fa7f78e Add DNPM Node feature to minimal 2023-12-15 09:24:06 +00:00
Pierre Delpy 9bf1b42003
set mtba image to latest 2023-11-30 14:58:54 +01:00
juarez 2ba9645ab4 Bugfix: MTBA 1.0.0 2023-11-30 12:29:58 +01:00
Tobias Kussel 2252504d78 add bwhc node module 2023-11-03 07:33:16 +00:00
p.delpy@dkfz-heidelberg.de 0555786435 fix bash logic 2023-10-24 07:42:27 +02:00
p.delpy@dkfz-heidelberg.de 262b9bd62e add adt2fhir-rest service 2023-10-24 07:30:17 +02:00
Torben Brenner 850a8eb973 chore: update postgres from 15.1 to 15.4 2023-09-18 15:06:00 +02:00
Tobias Kussel 169ce2436f fix dnpm connect env, from bool to string 2023-08-28 17:21:52 +00:00
Tobias Kussel bba8a03f9f Use beam-connect:develop for DNPM 2023-08-24 12:22:43 +00:00
Patrick Skowronek fa973e2cfa fix: path in mtba setup 2023-08-16 09:37:30 +02:00
Patrick Skowronek bbda5e917f Cleanup 2023-08-16 09:35:36 +02:00
Martin Lablans 54d83736c3 Move BBMRI-ERIC, GBN to modules 2023-08-07 15:19:41 +02:00
Torben Brenner 0a12720e4c fix: ensure id-management redirects with ssl 2023-07-25 13:27:21 +02:00
Tobias Kussel 6d94ebd4eb Add path stripper 2023-06-30 06:02:32 +00:00
Tobias Kussel f0d423fcf7 Adapt to new beam app syntax 2023-06-28 11:48:47 +02:00
Tobias Kussel ff4fb06ad1 Address review comments 2023-05-19 11:53:03 +00:00
Tobias Kussel a18b63e190 Use cached beam-connect image for dnpm 2023-05-17 10:04:35 +00:00
Tobias Kussel f4134bcfca Remove DNPM-BwHC experiment 2023-05-17 09:26:55 +00:00
Tobias Kussel 4e7f023b8a Clean up bwhc startup 2023-05-16 10:56:28 +00:00
Tobias Kussel 187945b27e Merge remote-tracking branch 'origin/main' into feature/dnpm-connect 2023-05-16 09:25:08 +00:00
Tobias Kussel c9806ad874 Adapt DNPM configuration 2023-05-15 13:43:01 +02:00
Tobias Kussel 498092d36a Replace deprecated openssl command 2023-05-10 10:59:13 +00:00
Tobias Kussel 3e1659a38d Modularize DNPM components 2023-05-10 10:54:05 +00:00
Martin Lablans 33b50372c6 Pull docker images from DKFZ mirror 2023-03-09 11:16:34 +01:00
Torben Brenner 5a7dd1d0ae fix: Use Mapped Site Id in Patientlist 2023-02-09 10:07:05 +01:00
Torben Brenner 64095ac8dd feat: Added Upload ApiKey to Patientlist 2023-02-09 09:15:29 +01:00
Torben Brenner d728ccd886 refactor: Fixated Postgres Version to 15.1 
All Minor Updates will cause a crashing postgres on start
 2023-02-08 15:02:35 +01:00
Torben Brenner c88919c926 feature: Ensured the mapping to legacy ids works 2023-02-08 14:42:52 +01:00