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bridgehead
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284 Commits

Author SHA1 Message Date
juarez 3fdda8b8d4 Comment on export and report volumes 2024-02-13 15:12:41 +01:00
juarez de0193b99b Bugfix: JAVA_OPTS for exporter 2024-02-13 15:12:41 +01:00
juarez 08c9e6c822 Add mtba module documentation 2024-02-13 15:12:41 +01:00
juarez 61bfd661eb Add teiler-ui module documentation 2024-02-13 15:12:41 +01:00
janskiba 9e0c7fb5ca Add some docs about beam-connect 2024-02-13 15:12:41 +01:00
juarez ce5f94881f Add login module documentation 2024-02-13 15:12:41 +01:00
juarez cb332142c3 Add Exporter module documentation 2024-02-13 15:12:41 +01:00
juarez 0cad79575b Add DataSHIELD module documentation 2024-02-13 15:12:41 +01:00
juarez 5f77168f65 Add JAVA_OPTS to reporter and exporter 2024-02-13 15:12:41 +01:00
juarez 361950ba7f Enable Login, Teiler and Exporter 2024-02-13 15:12:41 +01:00
juarez cb659b87f1 Export and QB Curl templates 2024-02-13 15:12:40 +01:00
juarez 0801ebe5a5 Generate exporter api key automatically 2024-02-13 15:12:40 +01:00
juarez ceb089ddd7 Add default language to ccp 2024-02-13 15:12:40 +01:00
juarez f71832dd65 Remove updater cron of teiler-core 2024-02-13 15:12:40 +01:00
juarez 17036d459e Remove clean temp files configuration of exporter 2024-02-13 15:12:40 +01:00
juarez 146417f103 Add explanation why is the volume of exporter-db currently so important for us. 2024-02-13 15:12:40 +01:00
juarez 0cd0dc555b Add Teiler Admin to Keycloak 2024-02-13 15:12:40 +01:00
juarez d3ecef5f04 Remove IS_DKTK_SITE 2024-02-13 15:12:40 +01:00
juarez 0caf98224f User default user rstudio in rstudio 2024-02-13 15:12:40 +01:00
Martin Lablans 412419494c Generate DATASHIELD_CONNECT_SECRET automatically 2024-02-13 15:12:40 +01:00
Martin Lablans 2f7797b1f1 Update ccp/modules/datashield-compose.yml 2024-02-13 15:12:40 +01:00
Martin Lablans dcd31bfd7c Update ccp/modules/datashield-compose.yml 2024-02-13 15:12:40 +01:00
Martin Lablans 90afe71b1b Use LDM_PASSWORD for all admin passwords 2024-02-13 15:12:40 +01:00
juarez d5924e64a3 Enable only if true 2024-02-13 15:12:40 +01:00
juarez dfa12ca686 Remove todo in rstudio 2024-02-13 15:12:40 +01:00
juarez 213ac6370a Remove unnecessary version of docker-compose.override files 2024-02-13 15:12:40 +01:00
juarez 9732ef33b7 R-Server rock-base:6.3 2024-02-13 15:12:40 +01:00
juarez dc6e0a349f User postgres if docker.verbis.dkfz.de 2024-02-13 15:12:40 +01:00
juarez cb909dbcd4 Remove ports of beam-connect in datashield-compose.yml 2024-02-13 15:12:40 +01:00
juarez 69f1748ae7 Generate passwords only if modules are enabled 2024-02-13 15:12:40 +01:00
juarez 0cbbee6906 Add http scheme to exporter 2024-02-13 15:12:39 +01:00
janskiba 7170612376 Migrate to new app key syntax 2024-02-13 15:12:39 +01:00
juarez 44134550ac update new broker 2024-02-13 15:12:39 +01:00
juarez 4ba5144140 Add parameter LOG_FHIR_VALIDATION to exporter 2024-02-13 15:12:39 +01:00
juarez 0d07a09296 Add reporter 2024-02-13 15:12:39 +01:00
janskiba 5b62a1a248 Switch to `no-auth` branch of beam-connect 2024-02-13 15:12:39 +01:00
janskiba bdf943f94e secrets are readonly by default 2024-02-13 15:12:39 +01:00
janskiba bc476ed0a8 change to dockerhub image 2024-02-13 15:12:39 +01:00
janskiba f351cc931c Change beam-connect version and load opal cert 2024-02-13 15:12:39 +01:00
janskiba 9dd3c24a6d Change cert permission and location 2024-02-13 15:12:39 +01:00
juarez b4581e8b3a ccp.conf in teiler-core as secret 2024-02-13 15:12:39 +01:00
juarez da49437ada Add opal certificate 2024-02-13 15:12:39 +01:00
juarez 1f4c2cad03 Remove unnecessary volumes 2024-02-13 15:12:39 +01:00
juarez cae40aa39a Remove mongo db 2024-02-13 15:12:39 +01:00
juarez 8679d46b62 Add Opal Password in Exporter 2024-02-13 15:12:39 +01:00
Martin Lablans 1438c32455 expose beam connect ports 2024-02-13 15:12:39 +01:00
Martin Lablans bfd33c0c1b Fix beam connect app id 2024-02-13 15:12:39 +01:00
Martin Lablans 0230303bd5 beam connect and move beam-connect config 2024-02-13 15:12:39 +01:00
juarez a86e594e85 Experiment 2024-02-13 15:12:39 +01:00
juarez 75f9b73e98 Experiment 2024-02-13 15:12:38 +01:00
juarez 90e2f2e40b Add DataSHIELD 2024-02-13 15:12:38 +01:00
juarez b0da23ac1c Bugfix: cross origins of exporter 2024-02-13 15:12:38 +01:00
juarez c836a7554f Merge id-management-setup with main 2024-02-13 15:12:38 +01:00
juarez fdd26083b6 Change salt string for exporter and login 2024-02-13 15:12:38 +01:00
juarez 3dcf83e4e8 Adapt teiler-ui to traefik 2024-02-13 15:12:38 +01:00
juarez a13b851edd Add keycloak teiler app to teiler-ui 2024-02-13 15:12:38 +01:00
juarez a2e9a86bc0 Change volume names for teiler components 2024-02-13 15:12:38 +01:00
juarez 1bb6df65fe Add stripprefix to teiler-ui 2024-02-13 15:12:38 +01:00
juarez 8e591773f4 Add stripprefix to teiler-core 2024-02-13 15:12:38 +01:00
juarez d915debbbb Add forward strategy to teiler-core 2024-02-13 15:12:38 +01:00
juarez 2c7bdfd868 Add forward strategy to teiler-core 2024-02-13 15:12:38 +01:00
juarez cf255bf08b Deactivate traffik for mtba 2024-02-13 15:12:38 +01:00
juarez 813a698dbb Tidy teiler and mtba volumes 2024-02-13 15:12:38 +01:00
juarez 30090f3633 Add Teiler Core 2024-02-13 15:12:38 +01:00
juarez 52f311ba1c Add Endpoint for Teiler 2024-02-13 15:12:38 +01:00
juarez f32d124fda Update Teiler Core config 2024-02-13 15:12:38 +01:00
juarez 8140b6dd7b Add original Keycloak config 2024-02-13 15:12:38 +01:00
p.delpy@dkfz-heidelberg.de a63bdbde54 update keykloak config 2024-02-13 15:12:37 +01:00
p.delpy@dkfz-heidelberg.de 7b24e2b427 beautiful config 2024-02-13 15:12:37 +01:00
juarez 5a9ab31fa4 Rename teiler to exporter (bugfix) 2024-02-13 15:12:37 +01:00
juarez 85d333cfe8 Rename teiler to exporter 2024-02-13 15:12:37 +01:00
juarez 0b61fc7f29 Configure login extern URLs 2024-02-13 15:12:37 +01:00
juarez 39981c310c Bugfix: services in teiler-ui-compose.yml 2024-02-13 15:12:37 +01:00
juarez 2f72ac2dc9 Change images of dktk-teiler and dktk-keycloak 2024-02-13 15:12:37 +01:00
juarez 81c0db0349 Add nngm and exliquid modules 2024-02-13 15:12:37 +01:00
juarez 005e5a1bf0 Add Teiler UI and Teiler module 2024-02-13 15:12:37 +01:00
Martin Lablans 44ac09b9c1 Bump postgres version to 15.6 2024-02-09 16:58:02 +01:00
Torben Brenner 2d5b6e6932
fix: set focus version to main 2024-02-08 12:30:42 +01:00
Enola Knezevic ae02526baf
Merge pull request #142 from samply/addTestInstancesForBbmri 
Tested for test GBN and ERIC BHs
 2024-01-16 13:03:12 +01:00
Martin Lablans ea51fc5910
Hotfix Pierre: Use version 1.0.0 for MTBA 2024-01-09 11:32:01 +01:00
Martin Lablans 29fb0e7099 Use focus tag depending on ENVIRONMENT 2024-01-08 15:49:46 +01:00
Tobias Kussel a80a980cea
Merge pull request #140 from samply/feature/dnpm-node 
Feature/dnpm node
 2023-12-18 10:53:39 +01:00
Tobias Kussel f66f2755d8 Change landing page path override to /landing 2023-12-15 13:32:00 +00:00
Tobias Kussel c02da838c7 Cleanup dnpm connect module 2023-12-15 09:41:11 +00:00
Tobias Kussel 459fa7f78e Add DNPM Node feature to minimal 2023-12-15 09:24:06 +00:00
Pierre Delpy 9bf1b42003
set mtba image to latest 2023-11-30 14:58:54 +01:00
juarez 2ba9645ab4 Bugfix: MTBA 1.0.0 2023-11-30 12:29:58 +01:00
Tobias Kussel 2252504d78 add bwhc node module 2023-11-03 07:33:16 +00:00
Tobias Kussel 6bf34b7732 Enable obfuscation for ccp queries 2023-11-02 07:34:56 +00:00
p.delpy@dkfz-heidelberg.de 0555786435 fix bash logic 2023-10-24 07:42:27 +02:00
p.delpy@dkfz-heidelberg.de 262b9bd62e add adt2fhir-rest service 2023-10-24 07:30:17 +02:00
Torben Brenner 850a8eb973 chore: update postgres from 15.1 to 15.4 2023-09-18 15:06:00 +02:00
Tobias Kussel 169ce2436f fix dnpm connect env, from bool to string 2023-08-28 17:21:52 +00:00
Tobias Kussel bba8a03f9f Use beam-connect:develop for DNPM 2023-08-24 12:22:43 +00:00
Patrick Skowronek fa973e2cfa fix: path in mtba setup 2023-08-16 09:37:30 +02:00
Patrick Skowronek bbda5e917f Cleanup 2023-08-16 09:35:36 +02:00
Torben Brenner e69c0ec306 Merge branch 'main' into dktk-migration 2023-08-16 09:14:04 +02:00
Pierre Delpy 829102f23e
Merge branch 'main' into feature/custom-basic-auth 2023-08-15 14:24:19 +02:00
p.delpy@dkfz-heidelberg.de dc0fc286b1 add generic bash function addBasicAuthUser 2023-08-08 09:28:59 +02:00
Martin Lablans 54d83736c3 Move BBMRI-ERIC, GBN to modules 2023-08-07 15:19:41 +02:00