164 Commits

Author	SHA1	Message	Date
juarez	9e867ade89	Add Exporter module documentation	2024-02-14 21:29:03 +01:00
juarez	be22977e0b	Add DataSHIELD module documentation	2024-02-14 21:29:03 +01:00
juarez	75e28f4123	Add JAVA_OPTS to reporter and exporter	2024-02-14 21:29:03 +01:00
juarez	4f024c8ad4	Export and QB Curl templates	2024-02-14 21:29:03 +01:00
juarez	e8dba5bc41	Generate exporter api key automatically	2024-02-14 21:29:03 +01:00
juarez	d86c0520c7	Add default language to ccp	2024-02-14 21:29:02 +01:00
juarez	ccb9f45995	Remove updater cron of teiler-core	2024-02-14 21:29:02 +01:00
juarez	a14ddb805c	Remove clean temp files configuration of exporter	2024-02-14 21:29:02 +01:00
juarez	3543a2b72b	Add explanation why is the volume of exporter-db currently so important for us.	2024-02-14 21:29:02 +01:00
juarez	6ace352a36	Add Teiler Admin to Keycloak	2024-02-14 21:29:02 +01:00
juarez	adf2bd6e27	Remove IS_DKTK_SITE	2024-02-14 21:29:02 +01:00
juarez	799252f3fc	User default user rstudio in rstudio	2024-02-14 21:29:02 +01:00
Martin Lablans	1eb6362fc5	Generate DATASHIELD_CONNECT_SECRET automatically	2024-02-14 21:29:02 +01:00
Martin Lablans	0e87f5ac34	Update ccp/modules/datashield-compose.yml	2024-02-14 21:29:02 +01:00
Martin Lablans	56fad15ba5	Update ccp/modules/datashield-compose.yml	2024-02-14 21:29:02 +01:00
Martin Lablans	1e9940f254	Use LDM_PASSWORD for all admin passwords	2024-02-14 21:29:02 +01:00
juarez	d05e96c141	Enable only if true	2024-02-14 21:29:02 +01:00
juarez	6ef3bf6726	Remove todo in rstudio	2024-02-14 21:29:02 +01:00
juarez	9fa971d92c	Remove unnecessary version of docker-compose.override files	2024-02-14 21:29:02 +01:00
juarez	8e51054887	R-Server rock-base:6.3	2024-02-14 21:29:02 +01:00
juarez	30cae72c42	User postgres if docker.verbis.dkfz.de	2024-02-14 21:29:02 +01:00
juarez	096caa8513	Remove ports of beam-connect in datashield-compose.yml	2024-02-14 21:29:02 +01:00
juarez	c03e85cfca	Generate passwords only if modules are enabled	2024-02-14 21:29:02 +01:00
juarez	5684307539	Add http scheme to exporter	2024-02-14 21:29:02 +01:00
janskiba	8cecb2cd47	Migrate to new app key syntax	2024-02-14 21:29:02 +01:00
juarez	3f0625ef2a	update new broker	2024-02-14 21:29:01 +01:00
juarez	128913cc9a	Add parameter LOG_FHIR_VALIDATION to exporter	2024-02-14 21:29:01 +01:00
juarez	309513e042	Add reporter	2024-02-14 21:29:01 +01:00
janskiba	b3d7b806bf	Switch to `no-auth` branch of beam-connect	2024-02-14 21:29:01 +01:00
janskiba	632b48bd37	secrets are readonly by default	2024-02-14 21:29:01 +01:00
janskiba	bb54de1534	change to dockerhub image	2024-02-14 21:29:01 +01:00
janskiba	9bcfdec5f0	Change beam-connect version and load opal cert	2024-02-14 21:29:01 +01:00
janskiba	5a33f6aa89	Change cert permission and location	2024-02-14 21:29:01 +01:00
juarez	a946b37c68	ccp.conf in teiler-core as secret	2024-02-14 21:29:01 +01:00
juarez	c966395236	Add opal certificate	2024-02-14 21:29:01 +01:00
juarez	e763bc3313	Remove unnecessary volumes	2024-02-14 21:29:01 +01:00
juarez	18e88f61f9	Remove mongo db	2024-02-14 21:29:01 +01:00
juarez	80739aa89b	Add Opal Password in Exporter	2024-02-14 21:29:01 +01:00
Martin Lablans	c5ab688ab7	expose beam connect ports	2024-02-14 21:29:01 +01:00
Martin Lablans	9bab3523b1	Fix beam connect app id	2024-02-14 21:29:01 +01:00
Martin Lablans	babfff4f24	beam connect and move beam-connect config	2024-02-14 21:29:01 +01:00
juarez	8b3db20430	Experiment	2024-02-14 21:29:01 +01:00
juarez	9b1b426aff	Experiment	2024-02-14 21:29:01 +01:00
juarez	1904256e6e	Add DataSHIELD	2024-02-14 21:29:01 +01:00
juarez	2c4c44fbca	Bugfix: cross origins of exporter	2024-02-14 21:29:01 +01:00
juarez	90b1ae619b	Merge id-management-setup with main	2024-02-14 21:29:01 +01:00
juarez	29c4e77e71	Change salt string for exporter and login	2024-02-14 21:29:01 +01:00
juarez	1ceff159f1	Adapt teiler-ui to traefik	2024-02-14 21:29:00 +01:00
juarez	46412f0567	Add keycloak teiler app to teiler-ui	2024-02-14 21:29:00 +01:00
juarez	c851e00af1	Change volume names for teiler components	2024-02-14 21:29:00 +01:00
juarez	e89279925d	Add stripprefix to teiler-ui	2024-02-14 21:29:00 +01:00
juarez	6c1e22b526	Add stripprefix to teiler-core	2024-02-14 21:29:00 +01:00
juarez	4baa81e8aa	Add forward strategy to teiler-core	2024-02-14 21:29:00 +01:00
juarez	9a0c8899cf	Add forward strategy to teiler-core	2024-02-14 21:29:00 +01:00
juarez	0a50d97acb	Deactivate traffik for mtba	2024-02-14 21:29:00 +01:00
juarez	198b255f07	Tidy teiler and mtba volumes	2024-02-14 21:29:00 +01:00
juarez	068abbc664	Add Teiler Core	2024-02-14 21:29:00 +01:00
juarez	0564c3c18e	Add Endpoint for Teiler	2024-02-14 21:29:00 +01:00
juarez	2c76c705dd	Update Teiler Core config	2024-02-14 21:29:00 +01:00
juarez	05429b065d	Add original Keycloak config	2024-02-14 21:29:00 +01:00
p.delpy@dkfz-heidelberg.de	29d51e33c9	update keykloak config	2024-02-14 21:29:00 +01:00
p.delpy@dkfz-heidelberg.de	6caebc2e15	beautiful config	2024-02-14 21:29:00 +01:00
juarez	9f5c30909b	Rename teiler to exporter (bugfix)	2024-02-14 21:29:00 +01:00
juarez	bb45a8c7bc	Rename teiler to exporter	2024-02-14 21:29:00 +01:00
juarez	3d513d0f60	Configure login extern URLs	2024-02-14 21:29:00 +01:00
juarez	6496b36d99	Bugfix: services in teiler-ui-compose.yml	2024-02-14 21:29:00 +01:00
juarez	73ed709a44	Change images of dktk-teiler and dktk-keycloak	2024-02-14 21:29:00 +01:00
juarez	7405e53935	Add nngm and exliquid modules	2024-02-14 21:29:00 +01:00
juarez	3a20460275	Add Teiler UI and Teiler module	2024-02-14 21:28:59 +01:00
Martin Lablans	44ac09b9c1	Bump postgres version to 15.6	2024-02-09 16:58:02 +01:00
Martin Lablans	ea51fc5910	Hotfix Pierre: Use version 1.0.0 for MTBA	2024-01-09 11:32:01 +01:00
Tobias Kussel	a80a980cea	Merge pull request #140 from samply/feature/dnpm-node ... Feature/dnpm node	2023-12-18 10:53:39 +01:00
Tobias Kussel	f66f2755d8	Change landing page path override to /landing	2023-12-15 13:32:00 +00:00
Tobias Kussel	c02da838c7	Cleanup dnpm connect module	2023-12-15 09:41:11 +00:00
Tobias Kussel	459fa7f78e	Add DNPM Node feature to minimal	2023-12-15 09:24:06 +00:00
Pierre Delpy	9bf1b42003	set mtba image to latest	2023-11-30 14:58:54 +01:00
juarez	2ba9645ab4	Bugfix: MTBA 1.0.0	2023-11-30 12:29:58 +01:00
Tobias Kussel	2252504d78	add bwhc node module	2023-11-03 07:33:16 +00:00
p.delpy@dkfz-heidelberg.de	0555786435	fix bash logic	2023-10-24 07:42:27 +02:00
p.delpy@dkfz-heidelberg.de	262b9bd62e	add adt2fhir-rest service	2023-10-24 07:30:17 +02:00
Torben Brenner	850a8eb973	chore: update postgres from 15.1 to 15.4	2023-09-18 15:06:00 +02:00
Tobias Kussel	169ce2436f	fix dnpm connect env, from bool to string	2023-08-28 17:21:52 +00:00
Tobias Kussel	bba8a03f9f	Use beam-connect:develop for DNPM	2023-08-24 12:22:43 +00:00
Patrick Skowronek	fa973e2cfa	fix: path in mtba setup	2023-08-16 09:37:30 +02:00
Patrick Skowronek	bbda5e917f	Cleanup	2023-08-16 09:35:36 +02:00
Martin Lablans	54d83736c3	Move BBMRI-ERIC, GBN to modules	2023-08-07 15:19:41 +02:00
Torben Brenner	0a12720e4c	fix: ensure id-management redirects with ssl	2023-07-25 13:27:21 +02:00
Tobias Kussel	6d94ebd4eb	Add path stripper	2023-06-30 06:02:32 +00:00
Tobias Kussel	f0d423fcf7	Adapt to new beam app syntax	2023-06-28 11:48:47 +02:00
Tobias Kussel	ff4fb06ad1	Address review comments	2023-05-19 11:53:03 +00:00
Tobias Kussel	a18b63e190	Use cached beam-connect image for dnpm	2023-05-17 10:04:35 +00:00
Tobias Kussel	f4134bcfca	Remove DNPM-BwHC experiment	2023-05-17 09:26:55 +00:00
Tobias Kussel	4e7f023b8a	Clean up bwhc startup	2023-05-16 10:56:28 +00:00
Tobias Kussel	187945b27e	Merge remote-tracking branch 'origin/main' into feature/dnpm-connect	2023-05-16 09:25:08 +00:00
Tobias Kussel	c9806ad874	Adapt DNPM configuration	2023-05-15 13:43:01 +02:00
Tobias Kussel	498092d36a	Replace deprecated openssl command	2023-05-10 10:59:13 +00:00
Tobias Kussel	3e1659a38d	Modularize DNPM components	2023-05-10 10:54:05 +00:00
Martin Lablans	33b50372c6	Pull docker images from DKFZ mirror	2023-03-09 11:16:34 +01:00
Torben Brenner	5a7dd1d0ae	fix: Use Mapped Site Id in Patientlist	2023-02-09 10:07:05 +01:00
Torben Brenner	64095ac8dd	feat: Added Upload ApiKey to Patientlist	2023-02-09 09:15:29 +01:00