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3 Commits
cbb73ab9b5
...
test/teile
Author | SHA1 | Date | |
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02954c1ef4 | |||
d482324361 | |||
b7a42f3d3b |
@ -23,6 +23,18 @@ services:
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- "traefik.http.routers.exporter_bbmri.tls=true"
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- "traefik.http.routers.exporter_bbmri.tls=true"
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- "traefik.http.middlewares.exporter_bbmri_strip.stripprefix.prefixes=/bbmri-exporter"
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- "traefik.http.middlewares.exporter_bbmri_strip.stripprefix.prefixes=/bbmri-exporter"
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- "traefik.http.routers.exporter_bbmri.middlewares=exporter_bbmri_strip"
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- "traefik.http.routers.exporter_bbmri.middlewares=exporter_bbmri_strip"
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# Main router
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- "traefik.http.routers.exporter_bbmri.priority=20"
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# API router
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- "traefik.http.routers.exporter_bbmri_api.middlewares=exporter_bbmri_strip,exporter_auth"
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- "traefik.http.routers.exporter_bbmri_api.rule=PathRegexp(`/bbmri-exporter/.+`)"
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- "traefik.http.routers.exporter_bbmri_api.tls=true"
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- "traefik.http.routers.exporter_bbmri_api.priority=25"
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# Shared middlewares
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- "traefik.http.middlewares.exporter_auth.basicauth.users=${EXPORTER_USER}"
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volumes:
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volumes:
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- "/var/cache/bridgehead/bbmri/exporter-files:/app/exporter-files/output"
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- "/var/cache/bridgehead/bbmri/exporter-files:/app/exporter-files/output"
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@ -65,3 +77,10 @@ services:
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- "traefik.http.routers.reporter_bbmri.tls=true"
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- "traefik.http.routers.reporter_bbmri.tls=true"
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- "traefik.http.middlewares.reporter_bbmri_strip.stripprefix.prefixes=/bbmri-reporter"
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- "traefik.http.middlewares.reporter_bbmri_strip.stripprefix.prefixes=/bbmri-reporter"
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- "traefik.http.routers.reporter_bbmri.middlewares=reporter_bbmri_strip"
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- "traefik.http.routers.reporter_bbmri.middlewares=reporter_bbmri_strip"
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- "traefik.http.routers.reporter_bbmri.priority=20"
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- "traefik.http.routers.reporter_bbmri_api.middlewares=reporter_bbmri_strip,exporter_auth"
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- "traefik.http.routers.reporter_bbmri_api.rule=PathRegexp(`/bbmri-reporter/.+`)"
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- "traefik.http.routers.reporter_bbmri_api.tls=true"
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- "traefik.http.routers.reporter_bbmri_api.priority=25"
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@ -19,7 +19,7 @@ services:
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HTTP_RELATIVE_PATH: "/bbmri-teiler"
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HTTP_RELATIVE_PATH: "/bbmri-teiler"
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teiler-dashboard:
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teiler-dashboard:
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image: docker.verbis.dkfz.de/cache/samply/teiler-dashboard:develop
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image: docker.verbis.dkfz.de/ccp/samply/teiler-dashboard:test
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container_name: bridgehead-teiler-dashboard
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container_name: bridgehead-teiler-dashboard
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labels:
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labels:
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- "traefik.enable=true"
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- "traefik.enable=true"
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@ -68,6 +68,3 @@ services:
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TEILER_DASHBOARD_DE_URL: "https://${HOST}/bbmri-teiler-dashboard/de"
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TEILER_DASHBOARD_DE_URL: "https://${HOST}/bbmri-teiler-dashboard/de"
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TEILER_DASHBOARD_EN_URL: "https://${HOST}/bbmri-teiler-dashboard/en"
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TEILER_DASHBOARD_EN_URL: "https://${HOST}/bbmri-teiler-dashboard/en"
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HTTP_PROXY: "http://forward_proxy:3128"
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HTTP_PROXY: "http://forward_proxy:3128"
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ENABLE_MTBA: "${ENABLE_MTBA}"
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ENABLE_DATASHIELD: "${ENABLE_DATASHIELD}"
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IDMANAGER_UPLOAD_APIKEY: "${IDMANAGER_UPLOAD_APIKEY}" # Only used to check if the ID Manager is active
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@ -5,5 +5,4 @@ if [ "$ENABLE_TEILER" == true ];then
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OVERRIDE+=" -f ./$PROJECT/modules/teiler-compose.yml"
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OVERRIDE+=" -f ./$PROJECT/modules/teiler-compose.yml"
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TEILER_DEFAULT_LANGUAGE=EN
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TEILER_DEFAULT_LANGUAGE=EN
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TEILER_DEFAULT_LANGUAGE_LOWER_CASE=${TEILER_DEFAULT_LANGUAGE,,}
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TEILER_DEFAULT_LANGUAGE_LOWER_CASE=${TEILER_DEFAULT_LANGUAGE,,}
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# add_public_oidc_redirect_url "/ccp-teiler/*"
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fi
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fi
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@ -3,7 +3,6 @@ BROKER_URL=https://${BROKER_ID}
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PROXY_ID=${SITE_ID}.${BROKER_ID}
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PROXY_ID=${SITE_ID}.${BROKER_ID}
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PRIVATEKEYFILENAME=/etc/bridgehead/pki/${SITE_ID}.priv.pem
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PRIVATEKEYFILENAME=/etc/bridgehead/pki/${SITE_ID}.priv.pem
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BROKER_URL_FOR_PREREQ=$BROKER_URL
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BROKER_URL_FOR_PREREQ=$BROKER_URL
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echo $PRIVATEKEYFILENAME
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# Makes sense for all European Biobanks
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# Makes sense for all European Biobanks
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: ${ENABLE_ERIC:=true}
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: ${ENABLE_ERIC:=true}
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@ -13,8 +12,6 @@ echo $PRIVATEKEYFILENAME
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FOCUS_RETRY_COUNT=${FOCUS_RETRY_COUNT:-64}
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FOCUS_RETRY_COUNT=${FOCUS_RETRY_COUNT:-64}
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POSTGRES_TAG=15.6-alpine
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for module in $PROJECT/modules/*.sh
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for module in $PROJECT/modules/*.sh
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do
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do
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log DEBUG "sourcing $module"
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log DEBUG "sourcing $module"
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@ -22,7 +22,7 @@ services:
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opal:
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opal:
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container_name: bridgehead-opal
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container_name: bridgehead-opal
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image: docker.verbis.dkfz.de/ccp/dktk-opal:test
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image: docker.verbis.dkfz.de/ccp/dktk-opal:latest
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labels:
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labels:
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- "traefik.enable=true"
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- "traefik.enable=true"
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- "traefik.http.routers.opal_ccp.rule=PathPrefix(`/opal`)"
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- "traefik.http.routers.opal_ccp.rule=PathPrefix(`/opal`)"
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@ -19,8 +19,7 @@ services:
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HTTP_RELATIVE_PATH: "/ccp-teiler"
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HTTP_RELATIVE_PATH: "/ccp-teiler"
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teiler-dashboard:
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teiler-dashboard:
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#image: docker.verbis.dkfz.de/cache/samply/teiler-dashboard:develop
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image: docker.verbis.dkfz.de/ccp/samply/teiler-dashboard:test
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image: samply/teiler-dashboard:develop
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container_name: bridgehead-teiler-dashboard
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container_name: bridgehead-teiler-dashboard
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labels:
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labels:
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- "traefik.enable=true"
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- "traefik.enable=true"
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2
ccp/vars
2
ccp/vars
@ -15,8 +15,6 @@ OIDC_PUBLIC_CLIENT_ID=${SITE_ID}-public
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OIDC_URL="https://login.verbis.dkfz.de/realms/test-realm-01"
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OIDC_URL="https://login.verbis.dkfz.de/realms/test-realm-01"
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OIDC_GROUP_CLAIM="groups"
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OIDC_GROUP_CLAIM="groups"
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POSTGRES_TAG=15.6-alpine
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for module in $PROJECT/modules/*.sh
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for module in $PROJECT/modules/*.sh
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do
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do
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log DEBUG "sourcing $module"
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log DEBUG "sourcing $module"
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@ -8,8 +8,6 @@ PRIVATEKEYFILENAME=/etc/bridgehead/pki/${SITE_ID}.priv.pem
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BROKER_URL_FOR_PREREQ=$BROKER_URL
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BROKER_URL_FOR_PREREQ=$BROKER_URL
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POSTGRES_TAG=15.6-alpine
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for module in ccp/modules/*.sh
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for module in ccp/modules/*.sh
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do
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do
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log DEBUG "sourcing $module"
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log DEBUG "sourcing $module"
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@ -301,34 +301,19 @@ function sync_secrets() {
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if [[ $secret_sync_args == "" ]]; then
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if [[ $secret_sync_args == "" ]]; then
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return
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return
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fi
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fi
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if [ "$PROJECT" == "bbmri" ]; then
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# If the project is BBMRI, use the BBMRI-ERIC broker and not the GBN broker
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proxy_id=$ERIC_PROXY_ID
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broker_url=$ERIC_BROKER_URL
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broker_id=$ERIC_BROKER_ID
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root_crt_file="/srv/docker/bridgehead/bbmri/modules/${ERIC_ROOT_CERT}.root.crt.pem"
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else
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proxy_id=$PROXY_ID
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broker_url=$BROKER_URL
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broker_id=$BROKER_ID
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root_crt_file="/srv/docker/bridgehead/$PROJECT/root.crt.pem"
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fi
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mkdir -p /var/cache/bridgehead/secrets/ || fail_and_report 1 "Failed to create '/var/cache/bridgehead/secrets/'. Please run sudo './bridgehead install $PROJECT' again."
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mkdir -p /var/cache/bridgehead/secrets/ || fail_and_report 1 "Failed to create '/var/cache/bridgehead/secrets/'. Please run sudo './bridgehead install $PROJECT' again."
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touch /var/cache/bridgehead/secrets/oidc
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touch /var/cache/bridgehead/secrets/oidc
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echo $PRIVATEKEYFILENAME
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docker run --rm \
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docker run --rm \
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-v /var/cache/bridgehead/secrets/oidc:/usr/local/cache \
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-v /var/cache/bridgehead/secrets/oidc:/usr/local/cache \
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-v $PRIVATEKEYFILENAME:/run/secrets/privkey.pem:ro \
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-v $PRIVATEKEYFILENAME:/run/secrets/privkey.pem:ro \
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-v $root_crt_file:/run/secrets/root.crt.pem:ro \
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-v /srv/docker/bridgehead/$PROJECT/root.crt.pem:/run/secrets/root.crt.pem:ro \
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-v /etc/bridgehead/trusted-ca-certs:/conf/trusted-ca-certs:ro \
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-v /etc/bridgehead/trusted-ca-certs:/conf/trusted-ca-certs:ro \
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-e TLS_CA_CERTIFICATES_DIR=/conf/trusted-ca-certs \
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-e TLS_CA_CERTIFICATES_DIR=/conf/trusted-ca-certs \
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-e NO_PROXY=localhost,127.0.0.1 \
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-e NO_PROXY=localhost,127.0.0.1 \
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-e ALL_PROXY=$HTTPS_PROXY_FULL_URL \
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-e ALL_PROXY=$HTTPS_PROXY_FULL_URL \
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-e PROXY_ID=$proxy_id \
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-e PROXY_ID=$PROXY_ID \
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-e BROKER_URL=$broker_url \
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-e BROKER_URL=$BROKER_URL \
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-e OIDC_PROVIDER=secret-sync-central.central-secret-sync.$broker_id \
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-e OIDC_PROVIDER=secret-sync-central.central-secret-sync.$BROKER_ID \
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-e SECRET_DEFINITIONS=$secret_sync_args \
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-e SECRET_DEFINITIONS=$secret_sync_args \
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docker.verbis.dkfz.de/cache/samply/secret-sync-local:latest
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docker.verbis.dkfz.de/cache/samply/secret-sync-local:latest
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@ -49,6 +49,12 @@ if [ -z "$TRANSFAIR_AUTH" ]; then
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fi
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fi
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fi
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fi
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if [ -z "$EXPORTER_USER" ]; then
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log "INFO" "Now generating basic auth for the exporter and reporter (see adduser in bridgehead for more information). "
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generated_passwd="$(cat /proc/sys/kernel/random/uuid | sed 's/[-]//g' | head -c 32)"
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add_basic_auth_user $PROJECT $generated_passwd "EXPORTER_USER" $PROJECT
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fi
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log "INFO" "Registering system units for bridgehead and bridgehead-update"
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log "INFO" "Registering system units for bridgehead and bridgehead-update"
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cp -v \
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cp -v \
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lib/systemd/bridgehead\@.service \
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lib/systemd/bridgehead\@.service \
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@ -1,3 +1,4 @@
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FOCUS_TAG=develop
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FOCUS_TAG=develop
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BEAM_TAG=develop
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BEAM_TAG=develop
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BLAZE_TAG=main
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BLAZE_TAG=main
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POSTGRES_TAG=15.13-alpine
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@ -1,3 +1,4 @@
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FOCUS_TAG=main
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FOCUS_TAG=main
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BEAM_TAG=main
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BEAM_TAG=main
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BLAZE_TAG=0.32
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BLAZE_TAG=0.32
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POSTGRES_TAG=15.13-alpine
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@ -1,3 +1,4 @@
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FOCUS_TAG=develop
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FOCUS_TAG=develop
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BEAM_TAG=develop
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BEAM_TAG=develop
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BLAZE_TAG=main
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BLAZE_TAG=main
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POSTGRES_TAG=15.13-alpine
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