Compare commits

..

7 Commits

Author SHA1 Message Date
David Juarez
5dbceba8eb Test 2025-07-30 11:36:18 +02:00
David Juarez
a3a979c522 changed: move teiler groups to teiler backend 2025-07-30 11:25:19 +02:00
djuarezgf
ada3226044 Replace hardcoded image: ...:develop references with version variables (#335)
* added: Teiler Dashboard Version

* added: MTBA Version

* added: beam proxy tag version
2025-07-30 11:21:10 +02:00
Paul-Christian Volkmer
a2e7330cee docs: Add ghcr.io to URL list (#321) 2025-07-25 10:58:56 +02:00
Jan
9c8d0ee8f5 fix(dnpm): fix env subsitution (#333) 2025-07-25 10:58:07 +02:00
djuarezgf
fcad7104f0 mtba: fallback to keycloak test server pending migration 2025-07-23 09:53:14 +02:00
djuarezgf
7e13e251f8 feat: migrate PSP to Authentik (#329) 2025-07-22 11:34:49 +02:00
17 changed files with 50 additions and 30 deletions

View File

@@ -85,6 +85,8 @@ The following URLs need to be accessible (prefix with `https://`):
* hub.docker.com * hub.docker.com
* registry-1.docker.io * registry-1.docker.io
* production.cloudflare.docker.com * production.cloudflare.docker.com
* GitHub Container Registry - (for use of DNPM:DIP)
* ghcr.io
* To report bridgeheads operational status * To report bridgeheads operational status
* healthchecks.verbis.dkfz.de * healthchecks.verbis.dkfz.de
* only for DKTK/CCP * only for DKTK/CCP
@@ -95,7 +97,7 @@ The following URLs need to be accessible (prefix with `https://`):
* only for German Biobank Node * only for German Biobank Node
* broker.bbmri.de * broker.bbmri.de
> 📝 This URL list is subject to change. Instead of the individual names, we highly recommend whitelisting wildcard domains: *.dkfz.de, github.com, *.docker.com, *.docker.io, *.samply.de, *.bbmri.de. > 📝 This URL list is subject to change. Instead of the individual names, we highly recommend whitelisting wildcard domains: *.dkfz.de, github.com, *.docker.com, *.docker.io, *.ghcr.io, *.samply.de, *.bbmri.de.
> 📝 Ubuntu's pre-installed uncomplicated firewall (ufw) is known to conflict with Docker, more info [here](https://github.com/chaifeng/ufw-docker). > 📝 Ubuntu's pre-installed uncomplicated firewall (ufw) is known to conflict with Docker, more info [here](https://github.com/chaifeng/ufw-docker).

View File

@@ -19,7 +19,7 @@ services:
HTTP_RELATIVE_PATH: "/bbmri-teiler" HTTP_RELATIVE_PATH: "/bbmri-teiler"
teiler-dashboard: teiler-dashboard:
image: docker.verbis.dkfz.de/cache/samply/teiler-dashboard:develop image: docker.verbis.dkfz.de/cache/samply/teiler-dashboard:${TEILER_DASHBOARD_TAG}
container_name: bridgehead-teiler-dashboard container_name: bridgehead-teiler-dashboard
labels: labels:
- "traefik.enable=true" - "traefik.enable=true"

View File

@@ -19,7 +19,7 @@ services:
HTTP_RELATIVE_PATH: "/cce-teiler" HTTP_RELATIVE_PATH: "/cce-teiler"
teiler-dashboard: teiler-dashboard:
image: docker.verbis.dkfz.de/cache/samply/teiler-dashboard:develop image: docker.verbis.dkfz.de/cache/samply/teiler-dashboard:${TEILER_DASHBOARD_TAG}
container_name: bridgehead-teiler-dashboard container_name: bridgehead-teiler-dashboard
labels: labels:
- "traefik.enable=true" - "traefik.enable=true"

View File

@@ -43,7 +43,7 @@ services:
- "traefik.http.routers.dnpm-auth.tls=true" - "traefik.http.routers.dnpm-auth.tls=true"
dnpm-portal: dnpm-portal:
image: ghcr.io/dnpm-dip/portal:{DNPM_IMAGE_TAG:-latest} image: ghcr.io/dnpm-dip/portal:${DNPM_IMAGE_TAG:-latest}
container_name: bridgehead-dnpm-portal container_name: bridgehead-dnpm-portal
environment: environment:
- NUXT_API_URL=http://dnpm-backend:9000/ - NUXT_API_URL=http://dnpm-backend:9000/
@@ -58,7 +58,7 @@ services:
dnpm-backend: dnpm-backend:
container_name: bridgehead-dnpm-backend container_name: bridgehead-dnpm-backend
image: ghcr.io/dnpm-dip/backend:{DNPM_IMAGE_TAG:-latest} image: ghcr.io/dnpm-dip/backend:${DNPM_IMAGE_TAG:-latest}
environment: environment:
- LOCAL_SITE=${ZPM_SITE}:${SITE_NAME} # Format: {Site-ID}:{Site-name}, e.g. UKT:Tübingen - LOCAL_SITE=${ZPM_SITE}:${SITE_NAME} # Format: {Site-ID}:{Site-name}, e.g. UKT:Tübingen
- RD_RANDOM_DATA=${DNPM_SYNTH_NUM:--1} - RD_RANDOM_DATA=${DNPM_SYNTH_NUM:--1}

View File

@@ -14,6 +14,7 @@ services:
MAGICPL_CONNECTOR_APIKEY: ${IDMANAGER_READ_APIKEY} MAGICPL_CONNECTOR_APIKEY: ${IDMANAGER_READ_APIKEY}
MAGICPL_CENTRAL_PATIENTLIST_APIKEY: ${IDMANAGER_CENTRAL_PATIENTLIST_APIKEY} MAGICPL_CENTRAL_PATIENTLIST_APIKEY: ${IDMANAGER_CENTRAL_PATIENTLIST_APIKEY}
MAGICPL_CONTROLNUMBERGENERATOR_APIKEY: ${IDMANAGER_CONTROLNUMBERGENERATOR_APIKEY} MAGICPL_CONTROLNUMBERGENERATOR_APIKEY: ${IDMANAGER_CONTROLNUMBERGENERATOR_APIKEY}
MAGICPL_OIDC_PROVIDER: ${OIDC_PRIVATE_URL}
depends_on: depends_on:
- patientlist - patientlist
- traefik-forward-auth - traefik-forward-auth
@@ -71,12 +72,14 @@ services:
- https_proxy=http://forward_proxy:3128 - https_proxy=http://forward_proxy:3128
- OAUTH2_PROXY_PROVIDER=oidc - OAUTH2_PROXY_PROVIDER=oidc
- OAUTH2_PROXY_SKIP_PROVIDER_BUTTON=true - OAUTH2_PROXY_SKIP_PROVIDER_BUTTON=true
- OAUTH2_PROXY_OIDC_ISSUER_URL=https://login.verbis.dkfz.de/realms/master - OAUTH2_PROXY_OIDC_ISSUER_URL=${OIDC_PRIVATE_URL}
- OAUTH2_PROXY_CLIENT_ID=bridgehead-${SITE_ID} - OAUTH2_PROXY_CLIENT_ID=${OIDC_PRIVATE_CLIENT_ID}
- OAUTH2_PROXY_CLIENT_SECRET=${IDMANAGER_AUTH_CLIENT_SECRET} - OAUTH2_PROXY_CLIENT_SECRET=${OIDC_CLIENT_SECRET}
- OAUTH2_PROXY_COOKIE_SECRET=${IDMANAGER_AUTH_COOKIE_SECRET} - OAUTH2_PROXY_COOKIE_SECRET=${IDMANAGER_AUTH_COOKIE_SECRET}
- OAUTH2_PROXY_COOKIE_NAME=_BRIDGEHEAD_oauth2_idm - OAUTH2_PROXY_COOKIE_NAME=_BRIDGEHEAD_oauth2_idm
- OAUTH2_PROXY_COOKIE_DOMAINS=.${HOST} - OAUTH2_PROXY_COOKIE_DOMAINS=.${HOST}
- OAUTH2_PROXY_COOKIE_REFRESH=4m
- OAUTH2_PROXY_COOKIE_EXPIRE=24h
- OAUTH2_PROXY_HTTP_ADDRESS=:4180 - OAUTH2_PROXY_HTTP_ADDRESS=:4180
- OAUTH2_PROXY_REVERSE_PROXY=true - OAUTH2_PROXY_REVERSE_PROXY=true
- OAUTH2_PROXY_WHITELIST_DOMAINS=.${HOST} - OAUTH2_PROXY_WHITELIST_DOMAINS=.${HOST}
@@ -87,8 +90,8 @@ services:
- OAUTH2_PROXY_SET_AUTHORIZATION_HEADER=true - OAUTH2_PROXY_SET_AUTHORIZATION_HEADER=true
- OAUTH2_PROXY_SET_XAUTHREQUEST=true - OAUTH2_PROXY_SET_XAUTHREQUEST=true
# Keycloak has an expiration time of 60s therefore oauth2-proxy needs to refresh after that # Keycloak has an expiration time of 60s therefore oauth2-proxy needs to refresh after that
- OAUTH2_PROXY_COOKIE_REFRESH=60s - OAUTH2_PROXY_ALLOWED_GROUPS=${OIDC_PSP_GROUP}
- OAUTH2_PROXY_ALLOWED_GROUPS=DKTK-CCP-PPSN - OAUTH2_PROXY_OIDC_GROUPS_CLAIM=${OIDC_GROUP_CLAIM}
- OAUTH2_PROXY_PROXY_PREFIX=/oauth2-idm - OAUTH2_PROXY_PROXY_PREFIX=/oauth2-idm
labels: labels:
- "traefik.enable=true" - "traefik.enable=true"

View File

@@ -14,6 +14,8 @@ function idManagementSetup() {
# Ensure old ids are working !!! # Ensure old ids are working !!!
export IDMANAGEMENT_FRIENDLY_ID=$(legacyIdMapping "$SITE_ID") export IDMANAGEMENT_FRIENDLY_ID=$(legacyIdMapping "$SITE_ID")
add_private_oidc_redirect_url "/oauth2-idm/callback"
fi fi
} }

View File

@@ -2,7 +2,7 @@ version: "3.7"
services: services:
mtba: mtba:
image: docker.verbis.dkfz.de/cache/samply/mtba:develop image: docker.verbis.dkfz.de/cache/samply/mtba:${MTBA_TAG}
container_name: bridgehead-mtba container_name: bridgehead-mtba
environment: environment:
BLAZE_STORE_URL: http://blaze:8080 BLAZE_STORE_URL: http://blaze:8080
@@ -22,8 +22,14 @@ services:
HTTP_RELATIVE_PATH: "/mtba" HTTP_RELATIVE_PATH: "/mtba"
OIDC_ADMIN_GROUP: "${OIDC_ADMIN_GROUP}" OIDC_ADMIN_GROUP: "${OIDC_ADMIN_GROUP}"
OIDC_CLIENT_ID: "${OIDC_PRIVATE_CLIENT_ID}" OIDC_CLIENT_ID: "${OIDC_PRIVATE_CLIENT_ID}"
OIDC_CLIENT_SECRET: "${OIDC_CLIENT_SECRET}" # TODO: Add following variables after moving to Authentik:
OIDC_URL: "${OIDC_URL}" #OIDC_CLIENT_SECRET: "${OIDC_CLIENT_SECRET}"
#OIDC_URL: "${OIDC_URL}"
# TODO: Remove following variables after moving to Authentik:
# Please add KECLOAK_CLIENT_SECRET in ccp.conf
OIDC_CLIENT_SECRET: "${KEYCLOAK_CLIENT_SECRET}"
OIDC_URL: "https://login.verbis.dkfz.de/realms/test-realm-01"
OIDC_ADMIN_URL: "https://login.verbis.dkfz.de/admin/realms/test-realm-01"
labels: labels:
- "traefik.enable=true" - "traefik.enable=true"

View File

@@ -19,7 +19,7 @@ services:
HTTP_RELATIVE_PATH: "/ccp-teiler" HTTP_RELATIVE_PATH: "/ccp-teiler"
teiler-dashboard: teiler-dashboard:
image: docker.verbis.dkfz.de/cache/samply/teiler-dashboard:develop image: docker.verbis.dkfz.de/ccp/samply/teiler-dashboard:test
container_name: bridgehead-teiler-dashboard container_name: bridgehead-teiler-dashboard
labels: labels:
- "traefik.enable=true" - "traefik.enable=true"
@@ -42,14 +42,12 @@ services:
EXPORTER_API_KEY: "${EXPORTER_API_KEY}" EXPORTER_API_KEY: "${EXPORTER_API_KEY}"
TEILER_ORCHESTRATOR_URL: "/ccp-teiler" TEILER_ORCHESTRATOR_URL: "/ccp-teiler"
TEILER_ORCHESTRATOR_HTTP_RELATIVE_PATH: "/ccp-teiler" TEILER_ORCHESTRATOR_HTTP_RELATIVE_PATH: "/ccp-teiler"
TEILER_USER: "${OIDC_USER_GROUP}"
TEILER_ADMIN: "${OIDC_ADMIN_GROUP}"
REPORTER_DEFAULT_TEMPLATE_ID: "ccp-qb" REPORTER_DEFAULT_TEMPLATE_ID: "ccp-qb"
EXPORTER_DEFAULT_TEMPLATE_ID: "ccp" EXPORTER_DEFAULT_TEMPLATE_ID: "ccp"
teiler-backend: teiler-backend:
image: docker.verbis.dkfz.de/ccp/dktk-teiler-backend:latest image: docker.verbis.dkfz.de/ccp/dktk-teiler-backend:test
container_name: bridgehead-teiler-backend container_name: bridgehead-teiler-backend
labels: labels:
- "traefik.enable=true" - "traefik.enable=true"
@@ -70,3 +68,7 @@ services:
ENABLE_MTBA: "${ENABLE_MTBA}" ENABLE_MTBA: "${ENABLE_MTBA}"
ENABLE_DATASHIELD: "${ENABLE_DATASHIELD}" ENABLE_DATASHIELD: "${ENABLE_DATASHIELD}"
IDMANAGER_UPLOAD_APIKEY: "${IDMANAGER_UPLOAD_APIKEY}" # Only used to check if the ID Manager is active IDMANAGER_UPLOAD_APIKEY: "${IDMANAGER_UPLOAD_APIKEY}" # Only used to check if the ID Manager is active
TEILER_ROLE_USER: "${OIDC_USER_GROUP}"
TEILER_ROLE_ADMIN: "${OIDC_ADMIN_GROUP}"
TEILER_ROLE_PSP: "${OIDC_PSP_GROUP}"

View File

@@ -10,12 +10,11 @@ BROKER_URL_FOR_PREREQ=$BROKER_URL
OIDC_USER_GROUP="DKTK_CCP_$(capitalize_first_letter ${SITE_ID})" OIDC_USER_GROUP="DKTK_CCP_$(capitalize_first_letter ${SITE_ID})"
OIDC_ADMIN_GROUP="DKTK_CCP_$(capitalize_first_letter ${SITE_ID})_Verwalter" OIDC_ADMIN_GROUP="DKTK_CCP_$(capitalize_first_letter ${SITE_ID})_Verwalter"
OIDC_PSP_GROUP="DKTK_CCP_$(capitalize_first_letter ${SITE_ID})_PSP"
OIDC_PRIVATE_CLIENT_ID=${SITE_ID}-private OIDC_PRIVATE_CLIENT_ID=${SITE_ID}-private
OIDC_PUBLIC_CLIENT_ID=${SITE_ID}-public OIDC_PUBLIC_CLIENT_ID=${SITE_ID}-public
#OIDC_URL="https://sso.verbis.dkfz.de/application/o/${OIDC_PUBLIC_CLIENT_ID}/" OIDC_URL="https://sso.verbis.dkfz.de/application/o/${OIDC_PUBLIC_CLIENT_ID}/"
#OIDC_PRIVATE_URL="https://sso.verbis.dkfz.de/application/o/${OIDC_PRIVATE_CLIENT_ID}/" OIDC_PRIVATE_URL="https://sso.verbis.dkfz.de/application/o/${OIDC_PRIVATE_CLIENT_ID}/"
OIDC_URL="https://login.verbis.dkfz.de/realms/test-realm-01"
OIDC_PRIVATE_URL="https://login.verbis.dkfz.de/realms/test-realm-01"
OIDC_GROUP_CLAIM="groups" OIDC_GROUP_CLAIM="groups"
for module in $PROJECT/modules/*.sh for module in $PROJECT/modules/*.sh

View File

@@ -39,7 +39,7 @@ services:
- "blaze" - "blaze"
beam-proxy: beam-proxy:
image: docker.verbis.dkfz.de/cache/samply/beam-proxy:develop image: docker.verbis.dkfz.de/cache/samply/beam-proxy:${BEAM_TAG}
container_name: bridgehead-beam-proxy container_name: bridgehead-beam-proxy
environment: environment:
BROKER_URL: ${BROKER_URL} BROKER_URL: ${BROKER_URL}

View File

@@ -40,7 +40,7 @@ services:
- "blaze" - "blaze"
beam-proxy: beam-proxy:
image: docker.verbis.dkfz.de/cache/samply/beam-proxy:develop image: docker.verbis.dkfz.de/cache/samply/beam-proxy:${BEAM_TAG}
container_name: bridgehead-beam-proxy container_name: bridgehead-beam-proxy
environment: environment:
BROKER_URL: ${BROKER_URL} BROKER_URL: ${BROKER_URL}

View File

@@ -19,7 +19,7 @@ services:
HTTP_RELATIVE_PATH: "/kr-teiler" HTTP_RELATIVE_PATH: "/kr-teiler"
teiler-dashboard: teiler-dashboard:
image: docker.verbis.dkfz.de/cache/samply/teiler-dashboard:develop image: docker.verbis.dkfz.de/cache/samply/teiler-dashboard:${TEILER_DASHBOARD_TAG}
container_name: bridgehead-teiler-dashboard container_name: bridgehead-teiler-dashboard
labels: labels:
- "traefik.enable=true" - "traefik.enable=true"

View File

@@ -327,7 +327,7 @@ function sync_secrets() {
-e ALL_PROXY=$HTTPS_PROXY_FULL_URL \ -e ALL_PROXY=$HTTPS_PROXY_FULL_URL \
-e PROXY_ID=$proxy_id \ -e PROXY_ID=$proxy_id \
-e BROKER_URL=$broker_url \ -e BROKER_URL=$broker_url \
-e OIDC_PROVIDER=secret-sync-central.secret-sync.$broker_id \ -e OIDC_PROVIDER=secret-sync-central.test-secret-sync.$broker_id \
-e SECRET_DEFINITIONS=$secret_sync_args \ -e SECRET_DEFINITIONS=$secret_sync_args \
docker.verbis.dkfz.de/cache/samply/secret-sync-local:latest docker.verbis.dkfz.de/cache/samply/secret-sync-local:latest

View File

@@ -43,7 +43,7 @@ services:
- "traefik.http.routers.dnpm-auth.tls=true" - "traefik.http.routers.dnpm-auth.tls=true"
dnpm-portal: dnpm-portal:
image: ghcr.io/dnpm-dip/portal:{DNPM_IMAGE_TAG:-latest} image: ghcr.io/dnpm-dip/portal:${DNPM_IMAGE_TAG:-latest}
container_name: bridgehead-dnpm-portal container_name: bridgehead-dnpm-portal
environment: environment:
- NUXT_API_URL=http://dnpm-backend:9000/ - NUXT_API_URL=http://dnpm-backend:9000/
@@ -58,7 +58,7 @@ services:
dnpm-backend: dnpm-backend:
container_name: bridgehead-dnpm-backend container_name: bridgehead-dnpm-backend
image: ghcr.io/dnpm-dip/backend:{DNPM_IMAGE_TAG:-latest} image: ghcr.io/dnpm-dip/backend:${DNPM_IMAGE_TAG:-latest}
environment: environment:
- LOCAL_SITE=${ZPM_SITE}:${SITE_NAME} # Format: {Site-ID}:{Site-name}, e.g. UKT:Tübingen - LOCAL_SITE=${ZPM_SITE}:${SITE_NAME} # Format: {Site-ID}:{Site-name}, e.g. UKT:Tübingen
- RD_RANDOM_DATA=${DNPM_SYNTH_NUM:--1} - RD_RANDOM_DATA=${DNPM_SYNTH_NUM:--1}

View File

@@ -2,3 +2,5 @@ FOCUS_TAG=develop
BEAM_TAG=develop BEAM_TAG=develop
BLAZE_TAG=main BLAZE_TAG=main
POSTGRES_TAG=15.13-alpine POSTGRES_TAG=15.13-alpine
TEILER_DASHBOARD_TAG=develop
MTBA_TAG=develop

View File

@@ -2,3 +2,5 @@ FOCUS_TAG=main
BEAM_TAG=main BEAM_TAG=main
BLAZE_TAG=0.32 BLAZE_TAG=0.32
POSTGRES_TAG=15.13-alpine POSTGRES_TAG=15.13-alpine
TEILER_DASHBOARD_TAG=main
MTBA_TAG=main

View File

@@ -2,3 +2,5 @@ FOCUS_TAG=develop
BEAM_TAG=develop BEAM_TAG=develop
BLAZE_TAG=main BLAZE_TAG=main
POSTGRES_TAG=15.13-alpine POSTGRES_TAG=15.13-alpine
TEILER_DASHBOARD_TAG=develop
MTBA_TAG=develop