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191f5f24da
Apply the PR #375 review feedback by removing Bridgehead-specific compose/setup overrides that duplicated upstream OVIS behavior and by switching to the upstream-built Mongo image that already contains init logic. - rename CCP OVIS services to consistent upstream-style names (`ovis-*`) and update internal dependencies - switch Mongo service image from direct `mongo:latest` + host-mounted init script to `docker.verbis.dkfz.de/ovis/ovis-backend-mongodb:latest` - remove obsolete Mongo init bind mount (`/docker-entrypoint-initdb.d/init.js`) from compose - drop redundant runtime overrides from compose (`restart`, `command`, `user`, `working_dir`) - remove duplicated app-default/preprocessor env overrides (`OVIS_PREPROC_*`, misc backend defaults) and keep deployment wiring only - fix Mongo connection env usage to `ADDRESS` and point services to `ovis-backend-database-mongodb` - remove temporary root-compat Traefik redirect shim and keep mounted `/ccp-ovis` routing labels - remove setup-time generation of Mongo init.js and related cache directory prep from `ccp/modules/ovis-setup.sh`
107 lines
4.2 KiB
YAML
107 lines
4.2 KiB
YAML
version: "3.7"
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services:
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ovis-backend-database-mongodb:
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image: docker.verbis.dkfz.de/ovis/ovis-backend-mongodb:latest
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container_name: bridgehead-ccp-ovis-mongo
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ovis-backend-mongodb-data-preprocessing:
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image: docker.verbis.dkfz.de/ovis/ovis-backend-preprocessor:latest
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container_name: bridgehead-ccp-ovis-preprocessing
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environment:
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ADDRESS: mongodb://ovis-backend-database-mongodb:27017
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HTTP_PROXY: ""
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HTTPS_PROXY: ""
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NO_PROXY: ""
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http_proxy: ""
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https_proxy: ""
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no_proxy: ""
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depends_on:
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- ovis-backend-database-mongodb
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healthcheck:
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test: ["CMD-SHELL", "node -e \"require('http').get('http://localhost:9000/health', res => process.exit(res.statusCode===200?0:1)).on('error', () => process.exit(1));\""]
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interval: 10s
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timeout: 5s
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retries: 6
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start_period: 5s
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ovis-backend-data-import:
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image: docker.verbis.dkfz.de/ovis/ovis-backend-data-import-ccp:latest
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container_name: bridgehead-ccp-ovis-import
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depends_on:
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ovis-backend-mongodb-data-preprocessing:
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condition: service_healthy
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environment:
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# CCP mode: FHIR source configuration (ignored by DEMO image)
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FHIR_SERVER_URL: http://bridgehead-ccp-blaze:8080/fhir
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FHIR_USERNAME: ""
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FHIR_PASSWORD: ""
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ICD10_FILTER: ""
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# Proxy configuration
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HTTP_PROXY: ""
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HTTPS_PROXY: ""
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NO_PROXY: ""
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http_proxy: ""
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https_proxy: ""
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no_proxy: ""
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ovis-backend-apollo:
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image: docker.verbis.dkfz.de/ovis/ovis-backend-apollo:latest
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container_name: bridgehead-ccp-ovis-backend
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environment:
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ADDRESS: mongodb://ovis-backend-database-mongodb:27017
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depends_on:
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- ovis-backend-database-mongodb
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- ovis-backend-mongodb-data-preprocessing
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- ovis-backend-data-import
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healthcheck:
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test: ["CMD-SHELL", "test -d /app/node_modules/mongodb"]
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interval: 10s
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timeout: 5s
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retries: 5
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labels:
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- "traefik.enable=true"
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- "traefik.http.routers.ovis-backend.rule=PathPrefix(`/graphql`)"
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- "traefik.http.routers.ovis-backend.tls=true"
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- "traefik.http.routers.ovis-backend.service=ovis-backend"
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- "traefik.http.routers.ovis-backend-ccp.rule=PathPrefix(`/ccp-ovis/graphql`)"
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- "traefik.http.routers.ovis-backend-ccp.tls=true"
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- "traefik.http.middlewares.ovis-backend-ccp-strip.stripprefix.prefixes=/ccp-ovis"
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- "traefik.http.routers.ovis-backend-ccp.middlewares=ovis-backend-ccp-strip"
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- "traefik.http.routers.ovis-backend-ccp.service=ovis-backend"
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- "traefik.http.services.ovis-backend.loadbalancer.server.port=4001"
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ovis-frontend:
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image: docker.verbis.dkfz.de/ovis/ovis-frontend:latest
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container_name: bridgehead-ccp-ovis-frontend
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environment:
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OVIS_PUBLIC_BASE_PATH: /ccp-ovis
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PUBLIC_GRAPHQL_URL: https://${HOST}/ccp-ovis/graphql
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PUBLIC_LOGIN_ENABLED: "false"
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PUBLIC_OVIS_IMPORT: ccp
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HTTP_PROXY: ""
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HTTPS_PROXY: ""
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NO_PROXY: ""
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http_proxy: ""
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https_proxy: ""
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no_proxy: ""
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depends_on:
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ovis-backend-apollo:
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condition: service_healthy
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labels:
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- "traefik.enable=true"
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- "traefik.http.routers.ovis-frontend-ccp-slash.tls=true"
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- "traefik.http.routers.ovis-frontend-ccp-slash.rule=Path(`/ccp-ovis`)"
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- "traefik.http.routers.ovis-frontend-ccp-slash.priority=1000"
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- "traefik.http.routers.ovis-frontend-ccp-slash.middlewares=ovis-frontend-ccp-slash-redirect"
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- "traefik.http.routers.ovis-frontend-ccp-slash.service=ovis-frontend"
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- "traefik.http.middlewares.ovis-frontend-ccp-slash-redirect.redirectregex.regex=^https?://([^/]+)/ccp-ovis$"
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- "traefik.http.middlewares.ovis-frontend-ccp-slash-redirect.redirectregex.replacement=https://$${1}/ccp-ovis/"
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- "traefik.http.middlewares.ovis-frontend-ccp-slash-redirect.redirectregex.permanent=true"
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- "traefik.http.routers.ovis-frontend-ccp.tls=true"
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- "traefik.http.routers.ovis-frontend-ccp.rule=PathPrefix(`/ccp-ovis`)"
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- "traefik.http.middlewares.ovis-frontend-ccp-strip.stripprefix.prefixes=/ccp-ovis"
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- "traefik.http.routers.ovis-frontend-ccp.middlewares=ovis-frontend-ccp-strip"
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- "traefik.http.services.ovis-frontend.loadbalancer.server.port=5173"
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