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Skiba, Jan
4989c45a18
DKFZ TransFAIR stores the project pseudonym the UMM site assigns to a linked patient in the DKFZ TTP. It needs that TTP's URL and an API key that may edit patients: DKFZ_TTP_URL and DKFZ_TTP_ML_API_KEY, both required, and DKFZ_PROJECT_ID_SYSTEM (default dhkiComId). Plain TTP_URL is not used, as it would also start the DIC TransFAIR.
13 lines
476 B
Bash
13 lines
476 B
Bash
#!/bin/bash
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function dkfzSetup() {
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if [ "${ENABLE_DKFZ:-}" == "true" ]; then
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assertVarsNotEmpty DKFZ_TTP_URL DKFZ_TTP_ML_API_KEY || \
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fail_and_report 1 "The DKFZ module requires DKFZ_TTP_URL and DKFZ_TTP_ML_API_KEY."
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log INFO "DKFZ TransFAIR setup detected -- will start TransFAIR and Beam.Connect."
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DKFZ_TRANSFAIR_BEAM_SECRET="$(cat /proc/sys/kernel/random/uuid | sed 's/[-]//g' | head -c 20)"
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OVERRIDE+=" -f ./dhki/modules/dkfz-compose.yml"
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fi
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}
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