Commit Graph

1046 Commits

Author SHA1 Message Date
David Juarez 5dbceba8eb Test 2025-07-30 11:36:18 +02:00
David Juarez a3a979c522 changed: move teiler groups to teiler backend 2025-07-30 11:25:19 +02:00
djuarezgf ada3226044 Replace hardcoded image: ...:develop references with version variables (#335)
* added: Teiler Dashboard Version

* added: MTBA Version

* added: beam proxy tag version
2025-07-30 11:21:10 +02:00
Paul-Christian Volkmer a2e7330cee docs: Add ghcr.io to URL list (#321) 2025-07-25 10:58:56 +02:00
Jan 9c8d0ee8f5 fix(dnpm): fix env subsitution (#333) 2025-07-25 10:58:07 +02:00
djuarezgf fcad7104f0 mtba: fallback to keycloak test server pending migration 2025-07-23 09:53:14 +02:00
djuarezgf 7e13e251f8 feat: migrate PSP to Authentik (#329) 2025-07-22 11:34:49 +02:00
Jan 2cfdc3ac3e feat(dnpm): allow setting custom dnpm image tag (#326) 2025-07-07 15:36:14 +02:00
djuarezgf 43b24c2a62 Fixed: Authentik URL for Opal (#328)
* Fixed: Authentik URL for Opal

* Removed: Unnecessary OIDC config in CCE and BBMRI

* KR with basic auth instead of OIDC
2025-07-07 15:35:54 +02:00
djuarezgf 8414604257 feat: migrate OIDC Configuration from Keycloak to Authentik (#327)
* Change: Authentik instead of Keycloak in CCP

Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>

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Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
2025-07-04 14:26:19 +02:00
Jan 4c6f9e0f13 feat: remove local rstudio (#322) 2025-06-27 10:55:53 +02:00
djuarezgf a1cdc2659d CCE Teiler and Export (#323)
* Added Exporter to CCE

* Add Teiler to CCE

* Add EXPORTER_USER to adduser function
2025-06-25 15:53:29 +02:00
Pierre Delpy 92bc0557a3 fix: add obfuscation and basic auth to spot in cce and itcc (#324)
Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
2025-06-25 14:58:20 +02:00
djuarezgf 141f1f22d0 Use relative paths in teiler (#320) 2025-06-18 17:04:09 +02:00
Tobias Kussel b4a788e010 docs: close Exporter code block in readme (#318) 2025-06-16 14:23:59 +02:00
djuarezgf c33fbfc8bc fix: Create Exporter User only if Exporter is enabled (#317) 2025-06-11 09:34:41 +02:00
Enola Knezevic faa8abd4ee chore: update eric.acc.root.crt.pem (#316) 2025-06-10 16:48:22 +02:00
djuarezgf 7693289d4d docs: add Teiler and Exporter to the main README.md (#315)
Co-authored-by: Tobias Kussel <TKussel@users.noreply.github.com>
2025-06-10 11:03:18 +02:00
djuarezgf d482324361 feat: add Teiler and Exporter in BBMRI (#312)
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
2025-06-05 16:55:03 +02:00
Martin Lablans b7a42f3d3b chore: externalize POSTGRES_TAG and bump postgres to 15.13 (#313) 2025-06-04 14:22:34 +02:00
Tim Schumacher fd013232f5 Cache public organoid dashboard SQL query (#309) 2025-05-23 15:26:59 +02:00
DavidCroftDKFZ eb52554892 docs: add faq (#288) 2025-05-22 18:10:40 +02:00
DavidCroftDKFZ 08c695e960 docs: Control import from Directory, improve README (#297) 2025-05-22 18:03:01 +02:00
DavidCroftDKFZ 1513fe1c6c Added section relating to clearing data from Blaze (#303) 2025-05-22 18:01:43 +02:00
djuarezgf af08a9fb08 chore: change some teiler variables (#307) 2025-05-20 16:24:24 +02:00
djuarezgf b95f0efbe7 fix: add own url to teiler dashboard to make it offline compatible (#305) 2025-05-20 09:39:14 +02:00
Torben Brenner 99567e2b40 fix: Ensure transfair can properly communicate with the fhir server for requests (#304) 2025-05-19 17:01:37 +02:00
Jan 96ff6043a1 feat: allow transfair to talk to services behind the proxy (#296) 2025-05-09 13:52:33 +02:00
Jan 844ce3386e chore(transfair): update transfair config (#298) 2025-05-09 11:30:26 +02:00
Martin Lablans 9782bf66b6 Code review: Move to /tmp/bridgehead/... 2025-05-08 09:18:02 +02:00
Tim Schumacher 87f0e8ad7f Use temp directory for secret sync cache 2025-05-08 09:18:02 +02:00
Jan 7365be3e7b chore(transfair): add option to disable tls verification (#295) 2025-04-17 12:01:45 +02:00
Enola Knezevic c5d08c50a4 chore: add BBMRI ERIC acceptance env (#294) 2025-04-16 15:37:55 +02:00
Jan 72ecaadba8 fix: ssh-tunnel-setup.sh (#293) 2025-04-15 11:36:20 +02:00
Jan 2ddd535794 feat: ssh tunnel (#292)
* Added ccp module for a ssh tunnel

Usage details under https://github.com/samply/ssh-tunnel

* chore: update ssh-tunnel image to harbor

* feat: ssh tunnel support diffrent port

* chore: fix indentation

* chore: move to top level modules

* docs: add ssh-tunnel docs

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Co-authored-by: Tobias Kussel <tobias.kussel@dkfz-heidelberg.de>
2025-04-14 10:45:15 +02:00
Jan 973547c322 chore(transfair): add new gw option (#291) 2025-04-11 08:37:31 +02:00
Jan 6b649c9233 feat: expose transfair via traefik (#290)
Note: Requires a bridgehead install to generate the basic auth user
2025-04-09 13:19:52 +02:00
Tim Schumacher 3144ee5214 Fix GitLab token syncing for BBMRI 2025-03-31 11:08:59 +02:00
janskiba 68804dc71b feat: add transfair setup to ccp 2025-03-26 13:11:43 +01:00
janskiba e5aebfe382 chore!: update transfair config 2025-03-26 13:11:43 +01:00
Torben Brenner 6f3aba1eaa feat: support self-signed cert on ttp (#283) 2025-03-12 15:45:55 +01:00
Jan 82ced89b33 chore: unify blaze versioning and upgrade to 0.32 (#277) 2025-03-12 12:52:00 +01:00
Martin Lablans 5d94bac0e2 Mount queries_to_cache.conf readonly (#282) 2025-03-10 16:03:05 +01:00
Tim Schumacher 83555540f5 chore: update central Secret Sync proxy ID (#280) 2025-03-10 12:08:19 +01:00
Pierre Delpy e396e00178 Fix/ccp cql cache (#279)
* fix: adapt focus caching to new cql and add focus caching for cce and itcc

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Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
2025-03-07 12:20:38 +01:00
Tim Schumacher ecb29830e4 Send the origin of /etc/bridgehead repo to Secret Sync
This is to anticipate an upcoming change in Secret Sync that will allow it to support multiple GitLab servers, e.g. verbis GitLab and BBMRI GitLab.
2025-03-05 11:04:22 +01:00
Torben Brenner 98121c17e8 Make Codeowners Rule apply to all Files in Repo 2025-02-20 17:28:38 +01:00
Torben Brenner e38511e118 Add Codeowners File 2025-02-20 17:20:54 +01:00
Pierre Delpy 8334fac84d fix: use correct obds2fhir-rest image
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Co-authored-by: Pierre Delpy <p.delpy@dkfz-heidelberg.de>
2025-02-20 13:48:10 +01:00
Torben Brenner 8000356b57 docs: explicitly clone main branch (#269) 2025-02-07 11:21:43 +01:00