Commit Graph
1049 Commits
Author SHA1 Message Date
JanandManoj Waikar 50ae129083 chore: add more options to transfair (#325) 2026-01-28 13:52:37 +01:00
JanandManoj Waikar 31c588afc2 fix: adapt to transfair cli changes (#319) 2026-01-28 13:52:37 +01:00
djuarezgfandManoj Waikar e728def9d4 Replace hardcoded image: ...:develop references with version variables (#335)
* added: Teiler Dashboard Version

* added: MTBA Version

* added: beam proxy tag version
2026-01-28 13:52:37 +01:00
Paul-Christian VolkmerandManoj Waikar f4ed80a00c docs: Add ghcr.io to URL list (#321) 2026-01-28 13:52:37 +01:00
JanandManoj Waikar ed5f319d79 fix(dnpm): fix env subsitution (#333) 2026-01-28 13:52:37 +01:00
djuarezgfandManoj Waikar 5ce1f6391b mtba: fallback to keycloak test server pending migration 2026-01-28 13:52:37 +01:00
djuarezgfandManoj Waikar 3589dede55 feat: migrate PSP to Authentik (#329) 2026-01-28 13:52:37 +01:00
JanandManoj Waikar 893f0332f9 feat(dnpm): allow setting custom dnpm image tag (#326) 2026-01-28 13:52:37 +01:00
djuarezgfandManoj Waikar 1b15a31c1b Fixed: Authentik URL for Opal (#328)
* Fixed: Authentik URL for Opal

* Removed: Unnecessary OIDC config in CCE and BBMRI

* KR with basic auth instead of OIDC
2026-01-28 13:52:37 +01:00
9b3a21b0c3 feat: migrate OIDC Configuration from Keycloak to Authentik (#327)
* Change: Authentik instead of Keycloak in CCP

Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>

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Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
2026-01-28 13:52:37 +01:00
JanandManoj Waikar 7cfa81d821 feat: remove local rstudio (#322) 2026-01-28 13:52:37 +01:00
djuarezgfandManoj Waikar 28fd775ba1 CCE Teiler and Export (#323)
* Added Exporter to CCE

* Add Teiler to CCE

* Add EXPORTER_USER to adduser function
2026-01-28 13:52:37 +01:00
Pierre DelpyManoj Waikarp.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
145b685d1c fix: add obfuscation and basic auth to spot in cce and itcc (#324)
Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
2026-01-28 13:52:37 +01:00
djuarezgfandManoj Waikar 68b599e305 Use relative paths in teiler (#320) 2026-01-28 13:52:37 +01:00
Tobias KusselandManoj Waikar 957514042c docs: close Exporter code block in readme (#318) 2026-01-28 13:52:37 +01:00
djuarezgfandManoj Waikar 99d76e7d08 fix: Create Exporter User only if Exporter is enabled (#317) 2026-01-28 13:52:37 +01:00
Enola KnezevicandManoj Waikar d911698986 chore: update eric.acc.root.crt.pem (#316) 2026-01-28 13:52:37 +01:00
949fe02f79 docs: add Teiler and Exporter to the main README.md (#315)
Co-authored-by: Tobias Kussel <TKussel@users.noreply.github.com>
2026-01-28 13:52:37 +01:00
b6a14da80b feat: add Teiler and Exporter in BBMRI (#312)
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
2026-01-28 13:52:37 +01:00
Martin LablansandManoj Waikar b4296349cd chore: externalize POSTGRES_TAG and bump postgres to 15.13 (#313) 2026-01-28 13:52:37 +01:00
Tim SchumacherandManoj Waikar 64a14a0048 Cache public organoid dashboard SQL query (#309) 2026-01-28 13:52:37 +01:00
DavidCroftDKFZandManoj Waikar 3a2fd51bf5 docs: add faq (#288) 2026-01-28 13:52:37 +01:00
DavidCroftDKFZandManoj Waikar f54ef47f57 docs: Control import from Directory, improve README (#297) 2026-01-28 13:52:37 +01:00
DavidCroftDKFZandManoj Waikar b7cdacb00b Added section relating to clearing data from Blaze (#303) 2026-01-28 13:52:37 +01:00
djuarezgfandManoj Waikar 4b700f8c34 chore: change some teiler variables (#307) 2026-01-28 13:52:37 +01:00
djuarezgfandManoj Waikar 600131862c fix: add own url to teiler dashboard to make it offline compatible (#305) 2026-01-28 13:52:37 +01:00
Torben BrennerandManoj Waikar 97eb50b93f fix: Ensure transfair can properly communicate with the fhir server for requests (#304) 2026-01-28 13:52:37 +01:00
JanandManoj Waikar 63f402269c feat: allow transfair to talk to services behind the proxy (#296) 2026-01-28 13:52:37 +01:00
JanandManoj Waikar 95272dd7ac chore(transfair): update transfair config (#298) 2026-01-28 13:52:37 +01:00
Martin LablansandManoj Waikar f4b6c9aa84 Code review: Move to /tmp/bridgehead/... 2026-01-28 13:52:37 +01:00
Tim SchumacherandManoj Waikar 1e027b6952 Use temp directory for secret sync cache 2026-01-28 13:52:37 +01:00
JanandManoj Waikar 5d5962ae2d chore(transfair): add option to disable tls verification (#295) 2026-01-28 13:52:37 +01:00
Enola KnezevicandManoj Waikar 689cc68e93 chore: add BBMRI ERIC acceptance env (#294) 2026-01-28 13:52:37 +01:00
JanandManoj Waikar beba01354d fix: ssh-tunnel-setup.sh (#293) 2026-01-28 13:52:37 +01:00
ce1665050c feat: ssh tunnel (#292)
* Added ccp module for a ssh tunnel

Usage details under https://github.com/samply/ssh-tunnel

* chore: update ssh-tunnel image to harbor

* feat: ssh tunnel support diffrent port

* chore: fix indentation

* chore: move to top level modules

* docs: add ssh-tunnel docs

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Co-authored-by: Tobias Kussel <tobias.kussel@dkfz-heidelberg.de>
2026-01-28 13:52:37 +01:00
JanandManoj Waikar acb7de11e7 chore(transfair): add new gw option (#291) 2026-01-28 13:52:37 +01:00
JanandManoj Waikar 53bee0e5e7 feat: expose transfair via traefik (#290)
Note: Requires a bridgehead install to generate the basic auth user
2026-01-28 13:52:37 +01:00
Tim SchumacherandManoj Waikar e00e371421 Fix GitLab token syncing for BBMRI 2026-01-28 13:52:37 +01:00
janskibaandManoj Waikar 9d96a2ddb0 feat: add transfair setup to ccp 2026-01-28 13:52:37 +01:00
janskibaandManoj Waikar f198e18c70 chore!: update transfair config 2026-01-28 13:52:37 +01:00
Manoj Waikar 82841a6f04 Fix airgapped-blaze-compose.yml file.
- BASE_URL & traefik settings
2025-03-25 15:23:16 +01:00
Manoj Waikar ba6f2c3b11 Modify container name (as it was a duplicate). 2025-03-24 09:50:06 +01:00
Manoj Waikar 39a4231c1f Add airgapped-blaze-{compose,setup} files in cce modules.
- for testing out airgapped-blaze at VHIO
2025-03-21 15:15:03 +01:00
Torben BrennerandGitHub 6f3aba1eaa feat: support self-signed cert on ttp (#283) 2025-03-12 15:45:55 +01:00
JanandGitHub 82ced89b33 chore: unify blaze versioning and upgrade to 0.32 (#277) 2025-03-12 12:52:00 +01:00
Martin LablansandGitHub 5d94bac0e2 Mount queries_to_cache.conf readonly (#282) 2025-03-10 16:03:05 +01:00
Tim SchumacherandGitHub 83555540f5 chore: update central Secret Sync proxy ID (#280) 2025-03-10 12:08:19 +01:00
Pierre DelpyGitHubp.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
e396e00178 Fix/ccp cql cache (#279)
* fix: adapt focus caching to new cql and add focus caching for cce and itcc

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Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
2025-03-07 12:20:38 +01:00
Tim SchumacherandTim Schumacher ecb29830e4 Send the origin of /etc/bridgehead repo to Secret Sync
This is to anticipate an upcoming change in Secret Sync that will allow it to support multiple GitLab servers, e.g. verbis GitLab and BBMRI GitLab.
2025-03-05 11:04:22 +01:00
Torben Brenner 98121c17e8 Make Codeowners Rule apply to all Files in Repo 2025-02-20 17:28:38 +01:00