Commit Graph
1093 Commits
Author SHA1 Message Date
Martin Jurk 7fd7f20733 keyset to var/ 2026-05-11 16:25:08 +02:00
Martin Jurk 0e245589bd db deleted 2026-05-11 14:20:23 +02:00
Martin Jurk aac22e7663 new refactor and encription key generation 2026-05-08 19:27:58 +02:00
Martin JurkandGitHub 4276562c0c Merge branch 'develop' into feature/ml-itcc 2026-04-23 08:56:10 +02:00
Martin Jurk c0af9c4a3a partner id 2026-04-23 08:45:54 +02:00
martin.jurk 2f13f16e00 refactor and patient endpoints 2026-04-23 08:12:37 +02:00
JanandGitHub 7a8664a636 fix project check in secret_sync_gitlab_token (#378) 2026-04-10 11:38:28 +02:00
71b25fe490 feat: add Data Quality Agent configuration and setup (#373)
* feat: add Data Quality Agent configuration and setup

* fix: correct environment variable name in Data Quality Agent configuration

* feat: update Data Quality Agent configuration and setup instructions

* feat: update Data Quality Agent setup and documentation

* feat: add volume configuration for agent data in Data Quality Agent compose file

* feat: update volume configuration for Data Quality Agent in compose file

* Update README.md

Co-authored-by: Tobias Kussel <TKussel@users.noreply.github.com>

---------

Co-authored-by: Tobias Kussel <TKussel@users.noreply.github.com>
2026-04-07 12:48:29 +02:00
Martin Jurk f304a40d68 secure db and ml 2026-03-27 08:10:48 +01:00
Martin Jurk aa97a863bd teswt socket and task 2026-03-26 12:12:59 +01:00
Pierre DelpyandGitHub bbda99254f feature: add osiris2fhir in cce and minor fixes (#374) 2026-03-17 15:54:25 +01:00
Pierre DelpyandGitHub c1de9b8314 WIP: enable osiris2fhir in PSCC for GR (#372)
enable osiris2fhir in PSCC for GR
2026-02-24 12:09:39 +01:00
Martin Jurk 0c92ddaa1b beam sockets 2026-02-23 16:14:25 +01:00
DavidCroftDKFZandGitHub 9d3ec957a2 Activate Directory token login (#371)
Right now, Directory sync will only be activated if a username has been
specified. It also needs to run if a login token has been specified,
hence the change in this commit.
2026-02-20 09:27:47 +01:00
Martin Jurk 0740452150 test server ip 2026-02-17 13:35:42 +01:00
Martin Jurk 0ecb93027f maizelliste env db 2026-02-16 18:08:52 +01:00
Martin Jurk 4658a115c2 clean up 2026-02-16 10:31:54 +01:00
Martin Jurk d8a1920ef9 ingest component test 2026-02-16 09:32:32 +01:00
Martin JurkandGitHub 7a9f80537b sites moved to etc itcc.comf (#369) 2026-02-10 16:04:33 +01:00
Pierre DelpyandGitHub bff06a6bb0 fix kr deployment (#370) 2026-02-10 11:21:36 +01:00
Martin Jurk ae1d184c9c db name chaged 2026-02-06 10:53:37 +01:00
martin.jurk 72634ec69d fix image 2026-02-06 10:34:59 +01:00
Martin Jurk e5fa8d044d volume 2026-02-05 16:38:28 +01:00
Martin Jurk 017620e870 mainzelliste test 2026-02-05 16:29:38 +01:00
Martin Jurk d83e58ae7f sites moved to etc itcc.comf 2026-02-05 07:28:59 +01:00
Martin JurkandGitHub 6923ead6ce feat: itcc lens2 (#365) 2026-01-28 14:28:09 +01:00
Manoj WaikarandGitHub 7dc9e2e663 Changes to make deployed CCE explorer work properly. (#368)
* Changes to make deployed CCE explorer work properly.

In the lens environment section in services:
- add PUBLIC_SPOT_URL value
2026-01-13 10:42:10 +01:00
JanandGitHub 85cfc2514d update beam proxy server used for oauth enrollment (#366) 2025-12-11 11:33:29 +01:00
Enola KnezevicandGitHub dd3387c2f1 test version blaze (#364)
This is the one we need urgently
2025-12-01 12:54:57 +01:00
Enola KnezevicandGitHub a5120ba75b obfuscate BBMRI ERIC way, test blaze version (#363) 2025-12-01 12:50:07 +01:00
Manoj WaikarandGitHub d0c87b40a6 Use the cce-explorer:main image from docker hub (instead of ghcr). (#362) 2025-11-21 14:52:42 +01:00
Pierre DelpyandGitHub 57f49ab5fc feat: migrate pscc to orange cloud broker (#361) 2025-11-21 10:42:21 +01:00
Manoj WaikarandGitHub e2569f4737 Use the main image name for cce explorer. (#360)
- instead of pr1 name
2025-11-20 14:34:33 +01:00
Manoj WaikarandGitHub 56a8aac326 Add APP_spot_KEY env var under the beam-proxy section. (#358) 2025-11-19 09:33:18 +01:00
Niklas ReimerandGitHub ab6e05826f feat(dnpm): set timezone to Europe/Berlin (#359) 2025-11-12 10:25:20 +01:00
394dcc2567 Directory sync: token login and cron change (#351)
The Directory team have requested that we allow token login to the
Directory, where a user uses LSAAI credentials to obtain a token from
the Directory, and then uses this to authenticate Directory sync. This
has been implemented via an environment variable, in an analogous way to
the already existing username/password method.

The default start time for the Directory sync has been shifted to 22:30,
to prevent conflicts with the Bridgehead auto-update.

Relevant changes have been made to the documentation.

Co-authored-by: Torben Brenner <76154651+torbrenner@users.noreply.github.com>
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
2025-11-11 09:43:08 +01:00
djuarezgfandGitHub 58d3e6487c feat: add nNGM project (#340) 2025-11-06 16:47:50 +01:00
Pierre DelpyGitHubp.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>Jan
230ff1debb feat: add PSCC
* add pscc and prepare lens2 deployment
---------

Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
2025-11-05 15:18:00 +01:00
DavidCroftDKFZandGitHub 6dea7c8fef Directory sync: inherit host timezone (#354)
Directory sync needs to be able to launch at specific times of day, and in order to do this in a predictable way, the timezone used inside the Docker container should be the same as the host. To do this, two files need to be mounted from the host. One file contains information about the time zone, the other file contains the file zone name.
2025-11-05 11:02:26 +01:00
djuarezgfandGitHub 66a1bd1122 docs: add initial documentation for Samply.Exporter and Samply.Teiler (#350) 2025-10-20 11:16:41 +02:00
Tim SchumacherandTim Schumacher 85957b3d48 Update focus tags: no project specific images anymore 2025-10-16 13:39:58 +02:00
JanandGitHub b31f2aff7d fix: don't run secret sync for minimal (#349) 2025-10-15 10:45:42 +02:00
JanandGitHub eab7700404 feat: add bridgehead check command (#342) 2025-09-30 11:47:51 +02:00
JanandGitHub 00b10f3ae6 fix: only pass CQL_PROJECTS_ENABLED to focus if set (#344) 2025-09-30 11:39:40 +02:00
JanandGitHub d1f5820d0f feat: allow cql queries for exliquid (#343) 2025-09-30 11:01:14 +02:00
Tim SchumacherandGitHub 8a35785a24 feat: add scout module (#339) 2025-09-02 13:23:34 +02:00
JanandGitHub e0754853d8 feat(dnpm): change to new api-gateway image (#337) 2025-08-19 16:35:52 +02:00
JanandGitHub 4407a87644 chore: add more options to transfair (#325) 2025-08-19 16:32:41 +02:00
JanandGitHub d0851d80a0 fix: adapt to transfair cli changes (#319) 2025-08-19 15:48:05 +02:00
djuarezgfandGitHub ada3226044 Replace hardcoded image: ...:develop references with version variables (#335)
* added: Teiler Dashboard Version

* added: MTBA Version

* added: beam proxy tag version
2025-07-30 11:21:10 +02:00