Pierre Delpy
8334fac84d
fix: use correct obds2fhir-rest image
...
---------
Co-authored-by: Pierre Delpy <p.delpy@dkfz-heidelberg.de >
2025-02-20 13:48:10 +01:00
Jan
721627a78f
feat: migrate to new dnpm:dip node ( #251 )
...
* feat: migrate to new dnpm:dip node
* hardcode dnpm connector type to broker
* use `SITE_NAME` for dnpm `LOCAL_SITE`
* host central targets in git
* dnpm: add goettingen to central targets
* dnpm: add uksh to central targets
* dnpm: replace named volumes with fs volumes
* chore: change dnpm images
* chore: pin mysql
* dnpm: Secure endpoints for ETL and p2p communications (#254 )
* fix authup redirect (#262 )
When a OIDC provider is configured, you'll get redirected to authup by Keycloak which redirects you to the DNPM:DIP.
Currently the url looks like this: https://myserver/authup//someurl
and produces an error. Manually removing the additional / fixes the issue.
* Whitespace formatting
---------
Co-authored-by: Niklas <niklas@ytvwld.de >
Co-authored-by: Niklas Reimer <niklas@backbord.net >
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com >
2025-02-05 13:24:28 +01:00
patrickskowronekdkfz
1003cd73cf
fix: changed ccp_ppi to use IDMANAGEMENT_FRIENDLY_ID instead of SITE_NAME ( #259 )
2025-01-21 09:30:20 +01:00
patrickskowronekdkfz
3d1105b97c
Update: Blaze to version 0.31 ( #260 )
2025-01-21 09:28:47 +01:00
Jan
5c28e704d2
fix: remove restart: always in compose files ( #261 )
2025-01-21 09:27:27 +01:00
Enola Knezevic
45aefd24e5
renamed exporter API key to EXPORTER_API_KEY ( #252 )
2024-12-06 11:27:38 +01:00
patrickskowronekdkfz
122ff16bb1
fix: use verbis cache image instead of docker-hub ( #250 )
2024-11-12 09:58:17 +01:00
djuarezgf
967e45624e
Add exporter configuration to focus ( #249 )
2024-11-05 15:46:00 +01:00
Tobias Kussel
8cd5b93b95
Merge pull request #237 from samply/feat/ccp-ppi
...
Feat/ccp ppi
2024-11-05 13:59:01 +01:00
Jan
52c24ee6fa
fix(fhir2sql): add the postgres connection string to focus ( #245 )
2024-11-05 13:34:36 +01:00
davidmscholz
26712d3567
feat: add and set FOCUS_ENDPOINT_TYPE to support fhir2sql ( #244 )
...
* add and set FOCUS_ENDPOINT_TYPE
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com >
---------
Co-authored-by: davidmscholz <david.scholz@dkfz-heidelberg.de >
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com >
2024-10-30 15:21:15 +01:00
Patrick Skowronek
23981062bb
Move ppi to id-management
2024-10-10 13:27:24 +02:00
Torben Brenner
eb2955872f
fix: allow usage of centraxx interface without login
...
Before this change CentraXX was redirected to the
central login servers then interacting with the id-management
2024-10-01 13:30:23 +02:00
p.delpy@dkfz-heidelberg.de
f0bdb5c146
fix: re-add modules
2024-09-12 09:25:38 +02:00
davidmscholz
ed8dacaa59
Fix fhir2sql db pw generation ( #219 )
...
fix postgresql password generation so that the password does not contain problematic characters that mess with the connection string
2024-08-29 09:15:22 +02:00
Jan
3fe781255b
feat: Configure beam-connect to trust ds-orchestrator beam proxy ( #220 )
2024-08-29 09:07:50 +02:00
Torben Brenner
6228cb3762
fix: specify host for id-management login
...
Otherwise traefik will match the route with the one specified in datashield-compose.yml
2024-08-19 17:09:10 +02:00
Torben Brenner
33843fe961
fix: switch id-management to keycloak
2024-08-19 14:43:21 +02:00
Tobias Kussel
9c941853bd
Merge pull request #196 from samply/new-dashboard-backend
...
Add new/additional dashboard backend
2024-08-01 10:05:32 +02:00
Tobias Kussel
2e5aeabca8
Rename fhir2sql module files
2024-07-30 07:44:47 +00:00
Tobias Kussel
af44b6b446
Fix depends_on syntax
2024-07-30 07:40:49 +00:00
davidmscholz
5ed07423f3
fix dashboard-compose
2024-07-30 09:24:07 +02:00
davidmscholz
df08d67839
add optional dashboard module
2024-07-29 10:45:00 +02:00
djuarezgf
293810f254
Added: exporter with blaze-secondary
2024-07-18 14:06:47 +02:00
p.delpy@dkfz-heidelberg.de
6b4480c54b
workaround: add second blaze
2024-07-18 14:06:47 +02:00
Pierre Delpy
b36c9ae03e
Fix patientlisturl in obds2fhir-rest-compose.yml
2024-07-16 10:49:23 +02:00
Pierre Delpy
91dc31d039
fix: use correct ID management flag for oBDS2FHIR
2024-07-08 14:31:09 +02:00
janskiba
9e4bc214ce
fix: Fix traefik label for oauth2 redirect
2024-07-03 13:01:02 +00:00
Pierre Delpy
2ee8e0185a
feature: upgrade to oBDS2FHIR
2024-07-02 08:57:15 +02:00
Martin Lablans
f28e3c2cd2
Remove unnecessary default values
2024-07-01 15:19:44 +02:00
Martin Lablans
91ff51304b
Add new dashboard backend
2024-07-01 15:14:38 +02:00
Martin Lablans
4fc53c00bf
Fix typo
2024-06-11 08:41:35 +02:00
Torben Brenner
29c2b5ef69
refactor: Ensure Mainzelliste returns SSL in Responses
...
Before, the Mainzelliste would always use http instead of https then
referring to it self in responses
2024-04-26 11:29:38 +02:00
patrickskowronekdkfz
4fac079aec
Merge branch 'main' into feature/datashield
2024-03-19 09:52:40 +01:00
Tobias Kussel
ec6f9302a1
Fix spelling of log WARN
2024-03-19 08:47:57 +00:00
Tobias Kussel
896b24be9b
Use bridgehead log functions in datashield setup
2024-03-19 08:45:50 +00:00
djuarezgf
adf8e35ba9
Remove empty file (teiler-ui-compose.yml)
2024-03-18 19:22:10 +01:00
djuarezgf
480bbe04e7
Changed: TEILER_DEFAULT_LANGUAGE
2024-03-18 16:47:40 +01:00
djuarezgf
3180d0fd76
Replace | openssl rsautl -sign with | sha1sum | openssl pkeyutl -sign
2024-03-18 12:44:34 +01:00
djuarezgf
8cb33c2ddc
Add warning if ENABLE_EXPORTER is not set or set to true
2024-03-18 12:18:19 +01:00
djuarezgf
591d95e8db
Remove empty line
2024-03-18 12:13:09 +01:00
djuarezgf
349027e969
Rename oauth2_proxy docker service to oauth2-proxy
2024-03-18 12:12:16 +01:00
djuarezgf
ff06782234
Remove todo
2024-03-18 12:04:04 +01:00
janskiba
5a6322fcaa
refactor: Move oauth2 proxy related things to datashield setup
2024-03-14 11:50:08 +00:00
janskiba
7478d804df
refactor: Move vars to their setup files
2024-03-11 10:34:05 +00:00
Tobias Kussel
ad4430e480
Create env to control dnpm synthetic data generation
2024-02-28 10:11:03 +00:00
janskiba
fb4da54297
chore: Add mannheim to datashield sites
2024-02-27 12:47:33 +01:00
janskiba
3e44dab9f2
chore: Remame datashield mappings to datashield sites
2024-02-27 12:47:33 +01:00
juarez
f72e7c7799
Changed: replace keycloak with oidc
2024-02-27 12:47:33 +01:00
juarez
9a1860ccf9
Removed: / from groups
2024-02-27 12:47:33 +01:00
