7c2e9af947
Set up sensible volumes for TransFAIR
...
Also gave instructions to copy over data file.
2024-02-13 14:00:21 +01:00
9459e1a979
Inserted ECDC-specific URLs and certificates
...
Also updated README to include instructions for manual Beam
registration.
2024-02-13 13:19:41 +01:00
d5760ed3d0
Modified instructions for ECDC
...
Also included a template configuration file.
2024-02-12 16:40:32 +01:00
8af5cf3f01
Changes made for EHDS2
...
The EHDS2 project has initiated a use case for antibiotic resistance
under the control of the ECDC. This branch caters for the ECDC
requirements.
Specifically, it contains the ETL to transform the ECDC CSV format to
FHIR, plus additional configuration options that have been packaged into
the bbmri project.
2024-02-12 16:07:57 +01:00
5ba1a1a820
Fix variable visibility
2024-01-09 11:47:02 +01:00
c4018aae08
fixed gbn broker url
2024-01-09 07:53:44 +01:00
417c158435
GBN broker IDs
2024-01-08 16:26:07 +01:00
00030a6141
GBN variable names
2024-01-08 16:15:46 +01:00
29fb0e7099
Use focus tag depending on ENVIRONMENT
2024-01-08 15:49:46 +01:00
00cae67fa1
Add missing switch-case for gbn
2024-01-08 15:49:28 +01:00
2074461ee7
Use new variable ENVIRONMENT in /etc/bridgehead; defaults to "production".
2024-01-08 13:03:12 +01:00
954d46efb1
Added test root certs and logic for beam to use test brokers
2024-01-05 11:58:42 +01:00
a80a980cea
Merge pull request #140 from samply/feature/dnpm-node
...
Feature/dnpm node
2023-12-18 10:53:39 +01:00
f66f2755d8
Change landing page path override to /landing
2023-12-15 13:32:00 +00:00
d28a3ac889
Add dnpm node module to bbmri project
2023-12-15 09:46:40 +00:00
c02da838c7
Cleanup dnpm connect module
2023-12-15 09:41:11 +00:00
a4ce7f4eb6
Fix subsitution
2023-09-22 07:35:05 +00:00
49b5cb976a
Use GBN Broker for timesync if ERIC is disabled
2023-09-22 07:25:04 +00:00
6b1ea4c74e
Update gbn-setup.sh
2023-09-04 15:54:22 +02:00
8c8ebb9298
Added gbn broker url and e-mail
2023-09-04 15:30:44 +02:00
0536023ceb
Merge pull request #117 from samply/feature/bbmri_de
...
Added broker.bbmri.de root cert
2023-09-04 14:44:38 +02:00
3a3a9d09a9
Added broker.bbmri.de root cert
2023-09-04 14:30:52 +02:00
169ce2436f
fix dnpm connect env, from bool to string
2023-08-28 17:21:52 +00:00
bba8a03f9f
Use beam-connect:develop for DNPM
2023-08-24 12:22:43 +00:00
54d83736c3
Move BBMRI-ERIC, GBN to modules
2023-08-07 15:19:41 +02:00
b32a19a7b5
Make Directory Sync a module
2023-08-07 13:00:24 +02:00
dd0c28daf3
Add new dktk root cert
2023-06-30 07:50:18 +00:00
6d94ebd4eb
Add path stripper
2023-06-30 06:02:32 +00:00
a033386464
Absolute path for beam root cert
2023-06-28 15:38:05 +02:00
f0d423fcf7
Adapt to new beam app syntax
2023-06-28 11:48:47 +02:00
3304d2818d
Merge branch 'main' into feature/dnpm-connect
2023-06-28 11:45:45 +02:00
499360712b
Merge pull request #83 from samply/update/blaze-20
...
Change blaze tag to latest
2023-06-28 11:43:57 +02:00
37ed5f5cd9
Merge pull request #88 from samply/new-beam-apikey-naming
...
New beam-proxy api key syntax
2023-06-28 11:34:06 +02:00
2f20082d4c
Change focus tag to main
2023-06-19 13:32:51 +02:00
b1ee2fa5f4
New beam-proxy api key syntax
2023-06-19 13:25:22 +02:00
f02587d9fa
Change DNPM broker id
2023-05-25 11:20:18 +00:00
ff4fb06ad1
Address review comments
2023-05-19 11:53:03 +00:00
a18b63e190
Use cached beam-connect image for dnpm
2023-05-17 10:04:35 +00:00
f4134bcfca
Remove DNPM-BwHC experiment
2023-05-17 09:26:55 +00:00
4e7f023b8a
Clean up bwhc startup
2023-05-16 10:56:28 +00:00
2de6504832
Change blaze tag to latest
2023-05-16 11:57:27 +02:00
187945b27e
Merge remote-tracking branch 'origin/main' into feature/dnpm-connect
2023-05-16 09:25:08 +00:00
c9806ad874
Adapt DNPM configuration
2023-05-15 13:43:01 +02:00
3e1659a38d
Modularize DNPM components
2023-05-10 10:54:05 +00:00
c10ba98084
Merge pull request #53 from samply/directory_sync
...
Added a Directory sync component
2023-04-03 08:45:50 +02:00
5b926ba20c
Remove opt directory_sync from compose
2023-03-31 12:15:43 +02:00
f4e65cc3d0
Implemented Torbens request for PR 53
2023-03-31 11:55:19 +02:00
e124e34d1e
Merge branch 'directory_sync' of https://github.com/samply/bridgehead into directory_sync
2023-03-31 10:04:28 +02:00
fa41f8d77f
Changed image to docker.verbis.dkfz.de/cache/
...
Requested by Torben Brenner in PR 53
2023-03-31 10:01:51 +02:00
df74d6d768
Make directory sync opt service
2023-03-31 08:04:28 +02:00
