Commit Graph

1021 Commits

Author SHA1 Message Date
e3510363ad fix: remove credentials from git remote, if update fails (#253)
Signed-off-by: Patrick Skowronek <patrick.skowronek@dkfz-heidelberg.de>
2024-12-10 17:18:07 +01:00
45aefd24e5 renamed exporter API key to EXPORTER_API_KEY (#252) 2024-12-06 11:27:38 +01:00
122ff16bb1 fix: use verbis cache image instead of docker-hub (#250) 2024-11-12 09:58:17 +01:00
967e45624e Add exporter configuration to focus (#249) 2024-11-05 15:46:00 +01:00
8cd5b93b95 Merge pull request #237 from samply/feat/ccp-ppi
Feat/ccp ppi
2024-11-05 13:59:01 +01:00
Jan
52c24ee6fa fix(fhir2sql): add the postgres connection string to focus (#245) 2024-11-05 13:34:36 +01:00
26712d3567 feat: add and set FOCUS_ENDPOINT_TYPE to support fhir2sql (#244)
* add and set FOCUS_ENDPOINT_TYPE

Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>

---------

Co-authored-by: davidmscholz <david.scholz@dkfz-heidelberg.de>
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
2024-10-30 15:21:15 +01:00
a4e292dd18 Merge pull request #241 from samply/develop
feat: add focus tags in ccp and bbmri (#240)
2024-10-23 07:24:06 +02:00
eea17c3478 fix: remove invalid beam-proxy tag and add it to focus instead (#242) 2024-10-22 16:48:48 +02:00
cf5230963c feat: add focus tags in ccp and bbmri (#240)
Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
2024-10-21 11:00:01 +02:00
75089ab428 Merge pull request #221 from samply/develop
Keep develop in sync with main
2024-10-15 14:30:15 +02:00
7aaee5e7d5 feat: add auto archiving action (#238)
* feat: add auto archiving action

---------

Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de>
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
2024-10-15 13:03:42 +02:00
3312ca8a64 feat: added blaze cql cache (#236) 2024-10-10 14:34:28 +02:00
23981062bb Move ppi to id-management 2024-10-10 13:27:24 +02:00
8e7fe6851e fix: use correct mainzelliste api key 2024-10-10 13:11:43 +02:00
760d599b7c Add CCP-PPI 2024-10-10 12:56:36 +02:00
072ee348fc fix: deactivate landingpage for KR project (#234)
fix: deactivate landingpage for KR project
2024-10-09 09:24:27 +02:00
f328e40963 Merge pull request #233 from samply/fix/id-management-redirection
Allow Usage of Centraxx Interface without login
2024-10-08 13:30:44 +02:00
599bcfcec4 Feature/send branch to healthchecks (#232)
feature: log git branches to healthchecks and code refactoring
2024-10-02 07:53:20 +02:00
eb2955872f fix: allow usage of centraxx interface without login
Before this change CentraXX was redirected to the
central login servers then interacting with the id-management
2024-10-01 13:30:23 +02:00
24da24d05e Traefik dashboard
Deactivate traefik dashboard by default. Add trailing slash to PathPrefix to clarify the URL the dashboard is available at.
2024-10-01 10:40:24 +02:00
65359c2ee6 Feature/pilot projects backup (#227)
add pilot projects
2024-09-12 10:04:53 +02:00
b1de62607f Merge pull request #223 from samply/feat/add-dkfz-hector-ki-project
Added DHKI project
2024-09-12 09:44:03 +02:00
969f1e7242 fix: remove accidental commit 2024-09-12 09:41:19 +02:00
77c870ab22 fix: fix bash path 2024-09-12 09:29:30 +02:00
f0bdb5c146 fix: re-add modules 2024-09-12 09:25:38 +02:00
735e064b03 Update queries_to_cache.conf 2024-09-12 09:19:21 +02:00
6465dcb0ad feat: added dhki project 2024-09-12 08:47:33 +02:00
c585322ee7 Merge pull request #226 from samply/main
Update Develop from Main
2024-09-12 08:22:17 +02:00
4568e32ffa readme: Data protection group --> officer 2024-09-04 09:26:37 +02:00
ed8dacaa59 Fix fhir2sql db pw generation (#219)
fix postgresql password generation so that the password does not contain problematic characters that mess with the connection string
2024-08-29 09:15:22 +02:00
Jan
3fe781255b feat: Configure beam-connect to trust ds-orchestrator beam proxy (#220) 2024-08-29 09:07:50 +02:00
b9f0bf7064 Merge pull request #205 from samply/fix/login-confusion-with-datashield
fix: specify host for id-management login
2024-08-20 08:22:24 +02:00
6228cb3762 fix: specify host for id-management login
Otherwise traefik will match the route with the one specified in datashield-compose.yml
2024-08-19 17:09:10 +02:00
05fa323c33 Merge pull request #198 from samply/fix/idmanagement-authentication
Switch ID-Management to Keycloak from Samply.Auth
2024-08-19 15:53:54 +02:00
33843fe961 fix: switch id-management to keycloak 2024-08-19 14:43:21 +02:00
0f1f88f538 Merge pull request #204 from samply/fix/environment
Don't repeat definition of ENVIRONMENT var
2024-08-19 09:15:52 +02:00
60acac619d Don't repeat definition of ENVIRONMENT var 2024-08-19 08:38:34 +02:00
376cd03bed Merge pull request #203 from samply/fix/environment
export ENVIRONMENT
2024-08-19 08:33:05 +02:00
ae95f14030 export ENVIRONMENT 2024-08-19 08:27:20 +02:00
25e1d4fb15 Merge pull request #202 from samply/main_fix_dirsync_passwd
Fixed environment variable passing for Directory sync
2024-08-15 13:43:39 +02:00
18c9e1bb30 Remove DP statement already present in readme. 2024-08-15 11:43:14 +00:00
de847f309c Provide defaults 2024-08-15 11:40:44 +00:00
3496fa7a0f Let Directory sync handle connection with Blaze
Remove the delayed start, because Directory sync will automatically keep trying to
connect to Blaze if not initially present.
2024-08-15 13:36:57 +02:00
95574f38be Included Blaze dependency 2024-08-15 10:33:28 +02:00
Jan
bff316cde1 Merge pull request #201 from samply/update/landing-page
Added env to landing-page
2024-08-15 10:00:09 +02:00
b8b81b1242 Fixed environment variable passing for Directory sync
There were problems with the passing of environment variables from
bbmri.conf to the Directory synce container:

* The Directory password variable was misspellt.
* Some useful variables were missing.

Additionally, a delay was added before launching Directory sync,
to give Blaze time to start up.
2024-08-15 09:17:34 +02:00
7c560a2e93 Added env to landing-page 2024-08-15 09:10:37 +02:00
4a13395408 Merge pull request #200 from samply/reduce-update-interval
Reduce bridgehead update interval to once a day at 6am
2024-08-05 08:29:15 +02:00
35d6a17778 Fix bridgehead update timer time convention
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
2024-08-01 11:39:03 +02:00