djuarezgf
fcad7104f0
mtba: fallback to keycloak test server pending migration
2025-07-23 09:53:14 +02:00
djuarezgf
7e13e251f8
feat: migrate PSP to Authentik ( #329 )
2025-07-22 11:34:49 +02:00
Jan
2cfdc3ac3e
feat(dnpm): allow setting custom dnpm image tag ( #326 )
2025-07-07 15:36:14 +02:00
djuarezgf
43b24c2a62
Fixed: Authentik URL for Opal ( #328 )
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* Fixed: Authentik URL for Opal
* Removed: Unnecessary OIDC config in CCE and BBMRI
* KR with basic auth instead of OIDC
2025-07-07 15:35:54 +02:00
djuarezgf
8414604257
feat: migrate OIDC Configuration from Keycloak to Authentik ( #327 )
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* Change: Authentik instead of Keycloak in CCP
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com >
---------
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com >
2025-07-04 14:26:19 +02:00
Jan
4c6f9e0f13
feat: remove local rstudio ( #322 )
2025-06-27 10:55:53 +02:00
djuarezgf
141f1f22d0
Use relative paths in teiler ( #320 )
2025-06-18 17:04:09 +02:00
djuarezgf
d482324361
feat: add Teiler and Exporter in BBMRI ( #312 )
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Co-authored-by: Jan <59206115+Threated@users.noreply.github.com >
2025-06-05 16:55:03 +02:00
Martin Lablans
b7a42f3d3b
chore: externalize POSTGRES_TAG and bump postgres to 15.13 ( #313 )
2025-06-04 14:22:34 +02:00
Tim Schumacher
fd013232f5
Cache public organoid dashboard SQL query ( #309 )
2025-05-23 15:26:59 +02:00
djuarezgf
af08a9fb08
chore: change some teiler variables ( #307 )
2025-05-20 16:24:24 +02:00
djuarezgf
b95f0efbe7
fix: add own url to teiler dashboard to make it offline compatible ( #305 )
2025-05-20 09:39:14 +02:00
janskiba
68804dc71b
feat: add transfair setup to ccp
2025-03-26 13:11:43 +01:00
Jan
82ced89b33
chore: unify blaze versioning and upgrade to 0.32 ( #277 )
2025-03-12 12:52:00 +01:00
Martin Lablans
5d94bac0e2
Mount queries_to_cache.conf readonly ( #282 )
2025-03-10 16:03:05 +01:00
Pierre Delpy
e396e00178
Fix/ccp cql cache ( #279 )
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* fix: adapt focus caching to new cql and add focus caching for cce and itcc
---------
Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de >
2025-03-07 12:20:38 +01:00
Pierre Delpy
8334fac84d
fix: use correct obds2fhir-rest image
...
---------
Co-authored-by: Pierre Delpy <p.delpy@dkfz-heidelberg.de >
2025-02-20 13:48:10 +01:00
Jan
721627a78f
feat: migrate to new dnpm:dip node ( #251 )
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* feat: migrate to new dnpm:dip node
* hardcode dnpm connector type to broker
* use `SITE_NAME` for dnpm `LOCAL_SITE`
* host central targets in git
* dnpm: add goettingen to central targets
* dnpm: add uksh to central targets
* dnpm: replace named volumes with fs volumes
* chore: change dnpm images
* chore: pin mysql
* dnpm: Secure endpoints for ETL and p2p communications (#254 )
* fix authup redirect (#262 )
When a OIDC provider is configured, you'll get redirected to authup by Keycloak which redirects you to the DNPM:DIP.
Currently the url looks like this: https://myserver/authup//someurl
and produces an error. Manually removing the additional / fixes the issue.
* Whitespace formatting
---------
Co-authored-by: Niklas <niklas@ytvwld.de >
Co-authored-by: Niklas Reimer <niklas@backbord.net >
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com >
2025-02-05 13:24:28 +01:00
patrickskowronekdkfz
1003cd73cf
fix: changed ccp_ppi to use IDMANAGEMENT_FRIENDLY_ID instead of SITE_NAME ( #259 )
2025-01-21 09:30:20 +01:00
patrickskowronekdkfz
3d1105b97c
Update: Blaze to version 0.31 ( #260 )
2025-01-21 09:28:47 +01:00
Jan
5c28e704d2
fix: remove restart: always in compose files ( #261 )
2025-01-21 09:27:27 +01:00
Enola Knezevic
45aefd24e5
renamed exporter API key to EXPORTER_API_KEY ( #252 )
2024-12-06 11:27:38 +01:00
patrickskowronekdkfz
122ff16bb1
fix: use verbis cache image instead of docker-hub ( #250 )
2024-11-12 09:58:17 +01:00
djuarezgf
967e45624e
Add exporter configuration to focus ( #249 )
2024-11-05 15:46:00 +01:00
Tobias Kussel
8cd5b93b95
Merge pull request #237 from samply/feat/ccp-ppi
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Feat/ccp ppi
2024-11-05 13:59:01 +01:00
Jan
52c24ee6fa
fix(fhir2sql): add the postgres connection string to focus ( #245 )
2024-11-05 13:34:36 +01:00
davidmscholz
26712d3567
feat: add and set FOCUS_ENDPOINT_TYPE to support fhir2sql ( #244 )
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* add and set FOCUS_ENDPOINT_TYPE
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com >
---------
Co-authored-by: davidmscholz <david.scholz@dkfz-heidelberg.de >
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com >
2024-10-30 15:21:15 +01:00
Pierre Delpy
cf5230963c
feat: add focus tags in ccp and bbmri ( #240 )
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Co-authored-by: p.delpy@dkfz-heidelberg.de <p.delpy@dkfz-heidelberg.de >
2024-10-21 11:00:01 +02:00
patrickskowronekdkfz
3312ca8a64
feat: added blaze cql cache ( #236 )
2024-10-10 14:34:28 +02:00
Patrick Skowronek
23981062bb
Move ppi to id-management
2024-10-10 13:27:24 +02:00
Patrick Skowronek
8e7fe6851e
fix: use correct mainzelliste api key
2024-10-10 13:11:43 +02:00
Patrick Skowronek
760d599b7c
Add CCP-PPI
2024-10-10 12:56:36 +02:00
Torben Brenner
eb2955872f
fix: allow usage of centraxx interface without login
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Before this change CentraXX was redirected to the
central login servers then interacting with the id-management
2024-10-01 13:30:23 +02:00
p.delpy@dkfz-heidelberg.de
f0bdb5c146
fix: re-add modules
2024-09-12 09:25:38 +02:00
Pierre Delpy
c585322ee7
Merge pull request #226 from samply/main
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Update Develop from Main
2024-09-12 08:22:17 +02:00
davidmscholz
ed8dacaa59
Fix fhir2sql db pw generation ( #219 )
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fix postgresql password generation so that the password does not contain problematic characters that mess with the connection string
2024-08-29 09:15:22 +02:00
Jan
3fe781255b
feat: Configure beam-connect to trust ds-orchestrator beam proxy ( #220 )
2024-08-29 09:07:50 +02:00
Torben Brenner
6228cb3762
fix: specify host for id-management login
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Otherwise traefik will match the route with the one specified in datashield-compose.yml
2024-08-19 17:09:10 +02:00
Torben Brenner
33843fe961
fix: switch id-management to keycloak
2024-08-19 14:43:21 +02:00
Tobias Kussel
9c941853bd
Merge pull request #196 from samply/new-dashboard-backend
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Add new/additional dashboard backend
2024-08-01 10:05:32 +02:00
janskiba
83b653e0c3
feat: Configure beam-connect to trust ds-orchestrator beam proxy
2024-07-31 07:18:30 +00:00
Tobias Kussel
2e5aeabca8
Rename fhir2sql module files
2024-07-30 07:44:47 +00:00
Tobias Kussel
af44b6b446
Fix depends_on syntax
2024-07-30 07:40:49 +00:00
davidmscholz
5ed07423f3
fix dashboard-compose
2024-07-30 09:24:07 +02:00
Martin Lablans
4ab10ff71d
In ENVIRONMENT=production, use main tag for Samply.Beam.
2024-07-29 13:50:30 +02:00
davidmscholz
df08d67839
add optional dashboard module
2024-07-29 10:45:00 +02:00
Torben Brenner
023be58528
Merge pull request #195 from samply/feature/caching-ccp
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add caching in focus
2024-07-26 14:07:15 +02:00
Pierre Delpy
d316f1c798
add caching in focus
2024-07-24 13:56:53 +02:00
djuarezgf
293810f254
Added: exporter with blaze-secondary
2024-07-18 14:06:47 +02:00
p.delpy@dkfz-heidelberg.de
6b4480c54b
workaround: add second blaze
2024-07-18 14:06:47 +02:00
