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timakro-patch-1

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Mono Color

• 5ca134c35d Changed: image used for cbioportal and teiler backend feature/cbioportal-datashield MuhannadBaraghith 2024-02-05 14:49:24 +01:00
• c565d14ee4 Changed: - used image for cbioportal in cbioportal-compose to the Harbor image MuhannadBaraghith 2024-01-24 11:09:27 +01:00
• a9c09c0d05 Added: cBioPortal juarez 2024-01-17 17:12:17 +01:00
• 2f663c45e8 Add dsCCPhos janskiba 2024-01-22 13:47:25 +00:00
• ebbe64abee Only sync secrets on startup janskiba 2024-01-22 08:25:57 +00:00
• 26c9e1286d fix: Use strong pw for opal janskiba 2023-12-22 10:54:13 +00:00
• 92984d24f3 fix: Generate stable passwords janskiba 2023-12-22 10:41:07 +00:00
• abedfdaf64 Added: volume for opal metadata db (III) juarez 2023-12-21 13:47:00 +01:00
• c751b72e0e Added: volume for opal metadata db (II) juarez 2023-12-21 13:40:32 +01:00
• 65eee84a4f Added: volume for opal metadata db juarez 2023-12-21 09:35:38 +01:00
• c0f497255c Add test sites janskiba 2023-12-21 08:29:04 +00:00
• 56c2955b5d Add central token manager beam id janskiba 2023-12-21 08:28:47 +00:00
• 0ced9b0e4e Added: allowed-groups juarez 2023-12-14 18:34:30 +01:00
• bb23d6f25b Added: Enable MTBA and Enable DataSHIELD to Teiler Backend juarez 2023-12-14 14:04:42 +01:00
• 8ac4e36ac1 Default values for MTBA juarez 2023-12-14 00:08:41 +01:00
• 4e809f66cb Use develop version of mtba juarez 2023-12-13 23:14:34 +01:00
• ca9f88421c Use last version of mtba juarez 2023-12-13 23:11:23 +01:00
• 8579bc879f Only users of group DataSHIELD can use R-Studio juarez 2023-12-13 22:57:37 +01:00
• 18dda72e84 teiler-orchestrator and teiler-dashboard latest juarez 2023-12-13 20:14:56 +01:00
• 164d1a66fb fix: undo permission changes on startup Jan 2023-12-13 17:54:54 +01:00
• ca7772421b fix: only change permissions on related files Jan 2023-12-13 17:39:35 +01:00
• 2ec44c9d48 fix: opal ssl cert janskiba 2023-12-13 14:07:11 +00:00
• 9231c99141 fix: chown syntax janskiba 2023-12-13 13:22:06 +00:00
• 2542c478c1 fix: beam connect site renaming janskiba 2023-12-13 13:17:16 +00:00
• 7fb27efae3 fix: Change permissions on new bridgehead dirs janskiba 2023-12-13 12:24:51 +00:00
• efd26aa761 fix: generate the right beam connect mappings janskiba 2023-12-13 11:01:25 +00:00
• cd36ab455b feat: Add token-manager to beam janskiba 2023-12-12 09:53:14 +00:00
• e9eccd5cab fix: Restrict rstudio network access janskiba 2023-12-08 11:50:06 +00:00
• 381633d4a0 move OAUTH2_SECRET juarez 2023-12-01 09:16:29 +01:00
• 30760075a6 add default template-ids of exporter and reporter juarez 2023-12-01 08:58:36 +01:00
• 1299ee2ab4 mtba develop juarez 2023-11-30 17:58:50 +01:00
• fe56cbbc19 add /oauth2/callback and /mtba to Keycloak private client juarez 2023-11-30 17:39:01 +01:00
• bd784e703a mtba latest juarez 2023-11-30 17:32:51 +01:00
• 109426cf43 Use develop branch for mtba juarez 2023-11-30 17:25:32 +01:00
• 40d6c7cae5 fix: public client generation janskiba 2023-11-30 14:05:07 +00:00
• a3c7a002fd Better redirect url handeling janskiba 2023-11-30 13:46:08 +00:00
• 91903fae24 Add oauth2_proxy juarez 2023-11-29 09:29:18 +01:00
• ea0435bee3 Add comment about PASSWORD and DISABLE_AUTH in R-Studio juarez 2023-11-28 16:51:30 +01:00
• ad1b00d16e Add proxy to R-Studio for loading R packages juarez 2023-11-28 16:50:36 +01:00
• e696d3b5dd Add Keycloak to MTBA juarez 2023-11-27 19:39:16 +01:00
• b683d07f48 Add keycloak configuration juarez 2023-11-24 08:52:54 +01:00
• eea53cd877 Add R-Studio Admin Password juarez 2023-11-23 17:28:39 +01:00
• b0ced71197 Add generate_password function juarez 2023-11-23 15:54:44 +01:00
• 185143c084 Bugfix: Export /var/cache/bridgehead/secrets as environment variables juarez 2023-11-23 14:33:28 +01:00
• 0a1070c3a5 Account for ip address host values janskiba 2023-11-23 10:28:43 +00:00
• 8505057863 Remove port handeling when generating redirect url janskiba 2023-11-23 09:58:34 +00:00
• 72d37c87f9 Add function generate_redirect_urls juarez 2023-11-23 10:38:50 +01:00
• 8aa851bfe4 Update oidc provider to new url janskiba 2023-11-21 10:39:17 +00:00
• 67831ba57b Generate addtional redirect url janskiba 2023-11-20 11:34:18 +00:00
• 0545189cec Integrate central Keycloak in Teiler juarez 2023-11-17 10:27:12 +01:00
• faf46f9fea Make sure path exists Jan Skiba 2023-11-16 14:24:41 +01:00
• c8e215199c Setup hostname earlier Jan Skiba 2023-11-16 14:21:19 +01:00
• c2b994e0d1 Update to new secret-sync semantics janskiba 2023-11-13 16:22:23 +00:00
• 4cd66f6689 Add secret sync to the bridgehead janskiba 2023-11-07 14:55:26 +00:00
• e99913cdc3 Bugfix: Add version in every docker compose file juarez 2023-09-11 13:27:08 +02:00
• afacdae20e Remove unnecessary version of docker-compose.override files juarez 2023-08-03 10:35:41 +02:00
• 33d955f17d Bugfix: Add version in every docker compose file juarez 2023-09-11 13:27:08 +02:00
• c0ff03da6b Remove unnecessary version of docker-compose.override files juarez 2023-08-03 10:35:41 +02:00
• 6582db0523 MTBA 1.0.0 juarez 2023-11-29 12:43:58 +01:00
• 27948c2a64 Remove nngmSetup in vars juarez 2023-11-03 17:03:15 +01:00
• c8e7cd5f25 Prevent creation of volumes Martin Lablans 2023-10-25 12:33:56 +02:00
• f2c55ade84 Use Bridgehead's internal http proxy lablans 2023-10-24 08:33:15 +00:00
• b20758bc3d Make Opal use proxy server Martin Lablans 2023-10-24 09:25:36 +02:00
• 8d22ea2c19 Use newest version of beam-connect janskiba 2023-10-23 12:33:56 +00:00
• 9eaaeb5064 Update export template script: FHIR_QUERY to FHIR_PATH juarez 2023-10-10 15:48:11 +02:00
• c9b19a9368 /var/cache for mtba juarez 2023-09-26 07:45:51 +02:00
• b0b599c96b Add docu about login in teiler juarez 2023-09-22 17:09:47 +02:00
• b7c6b15425 Bugfix: datashield local.json as array juarez 2023-09-22 15:36:21 +02:00
• 8e181a85c2 Prevent anonymous volume creation Martin Lablans 2023-09-22 10:24:10 +02:00
• b9dbfd4803 Bugfix: Exporter and Reporter /var/cache volumes juarez 2023-09-19 16:39:32 +02:00
• 3389145c1d Postgres 15.4 in datashield, exporter and login juarez 2023-09-19 14:21:15 +02:00
• 7d8b83b10c Update ccp/modules/mtba.md djuarezgfandMartin Lablans 2023-09-18 12:04:56 +02:00
• d799554f86 Bugfix: Add version of docker-compose juarez 2023-09-18 12:02:36 +02:00
• 4a4a1d76a7 Make sure copy works and the correct owner is set janskiba 2023-09-15 14:09:06 +00:00
• 785dff29bf Add all sites janskiba 2023-09-15 11:17:07 +00:00
• 1f9733aa4d Auto generate mappings janskiba 2023-09-15 09:45:28 +00:00
• c5578f81ee Add ccp to /var/cache/bridgehead/* volumes juarez 2023-09-15 15:16:46 +02:00
• fa5459c4dd Rewrite comments lablans 2023-09-15 08:24:44 +00:00
• 31320a856c Move exporter db to /var/cache/bridgehead lablans 2023-09-15 08:20:24 +00:00
• a340b959c2 Exporter cache lablans 2023-09-15 08:19:10 +00:00
• c7d0bcf94d Rework commented sections lablans 2023-09-15 08:14:12 +00:00
• 51ca9efe11 Autogenerate maps for Opal's beam-connect. To be completed by @Threated with a map-generator in the script. lablans 2023-09-15 08:12:16 +00:00
• 1ef6142306 Cache opal in /var/cache/bridgehead lablans 2023-09-15 08:11:40 +00:00
• e71495c70f Bugfix: Add version in every docker compose file juarez 2023-09-11 13:27:08 +02:00
• e6b7a63ef7 #!/bin/bash -e juarez 2023-09-04 16:43:40 +02:00
• 86ca652e8d Bugfix: LDM_AUTH instead of LDM_PASSWORD juarez 2023-09-04 15:15:34 +02:00
• d1a0153a6e Rename Teiler Backend, Teiler Dashboard and Teiler Orchestrator juarez 2023-08-17 18:10:12 +02:00
• 5b88df4912 Add site to exporter and reporter juarez 2023-08-14 15:52:53 +02:00
• 8345a9b1f1 Add forward proxy to teiler-core juarez 2023-08-14 11:17:44 +02:00
• 3d210ea303 Bugfix: mtba labels juarez 2023-08-11 17:22:34 +02:00
• d8451c0426 Bugfix: exporter juarez 2023-08-11 15:23:45 +02:00
• b63eb141f6 Disable datashield juarez 2023-08-11 15:08:08 +02:00
• f24dfa43ef Bugfix: MTBA path prefix juarez 2023-08-11 15:07:42 +02:00
• b6e03f3a78 Enable datashield juarez 2023-08-11 15:06:54 +02:00
• 8d1a7e7374 Comment Keycloak volume juarez 2023-08-10 21:50:52 +02:00
• 4b705be264 Fix comment in login-compose.yml juarez 2023-08-10 21:43:44 +02:00
• 3e79598533 Remove old comment of exporter-setup.sh juarez 2023-08-10 21:41:03 +02:00
• 6a97630bf1 Comment on datashield volume juarez 2023-08-10 20:54:15 +02:00
• 3fdda8b8d4 Comment on export and report volumes juarez 2023-08-10 20:52:34 +02:00
• de0193b99b Bugfix: JAVA_OPTS for exporter juarez 2023-08-10 20:36:34 +02:00