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bugfix/test-old-blaze

cherry-pick-tmp-pr

develop

dnpm-etl-rewrite

documentation/blaze_resources

ehds2

ehds2_develop

feat/blaze-frontend

feat/cBioPortal

feat/dnpm-dip

feat/routine-connector-minor-fixes

feat/selinux

feature/accessTokenFromConfiguration

feature/add-pscc

feature/add-qb-to-cce

feature/addExporterAndTeilerToEric

feature/auto-pr

feature/cBioPortal

feature/cbioportal-datashield

feature/component-moniotring

feature/dnpm-extra-broker

feature/exporter-docu

feature/externalize-versions

feature/feedback-agent

feature/nngm-rest

feature/opal

feature/opal-client-for-new-token-manager

feature/qr-basic-auth

feature/remove-rstudio

feature/snap

feature/teiler-for-ccp-and-bbmri

feature/teiler-roles

fix/kr-deactivate-landingpage

fix/pscc-develop

main

metadata_fb

ovis

pr-secret-sync-gitlab-bbmri

pro/lemedart

prototype/beamFile

qr-bbmri-v2

qr_bbmri

refactor/datashield-auth-config

refactor/independent-modules

refactor/logging

revert-223-feat/add-dkfz-hector-ki-project

set_env_variables_needed_for_fhir2sql

test-switch-branch

test/airgapped-blaze

test/exporter-no-python

test/keycloak

test/obds2fhir-batch-import

test/onkofdz

test/opal5

test/teiler-dashboard

torbrenner-patch-1

transfair-cli

transfair-more-env

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9260d0132a Merge pull request #74 from samply/documentation_minor_fix DavidCroftDKFZ 2023-04-25 16:31:08 +02:00
48dd477a94 Removed non-functioning links from Table of Contents Croft 2023-04-24 10:33:04 +02:00
3a42570ac4 Add DNPM discovery URL as public configuration Tobias Kussel 2023-04-04 13:11:33 +02:00
503f39820b Merge branch 'main' into dnpmconnector Tobias Kussel 2023-04-04 13:02:49 +02:00
c10ba98084 Merge pull request #53 from samply/directory_sync patrickskowronekdkfz 2023-04-03 08:45:50 +02:00
5b926ba20c Remove opt directory_sync from compose Patrick Skowronek 2023-03-31 12:15:43 +02:00
f4e65cc3d0 Implemented Torbens request for PR 53 Croft 2023-03-31 11:55:19 +02:00
e124e34d1e Merge branch 'directory_sync' of https://github.com/samply/bridgehead into directory_sync Croft 2023-03-31 10:04:28 +02:00
fa41f8d77f Changed image to docker.verbis.dkfz.de/cache/ Croft 2023-03-31 10:01:51 +02:00
df74d6d768 Make directory sync opt service Patrick Skowronek 2023-03-31 08:04:28 +02:00
559d527258 Merge pull request #71 from samply/fix/bbmri-enroll-vars Tobias Kussel 2023-03-27 16:03:58 +02:00
bdff02ce49 Update variable name to make enroll command work for BBMRI Tobias Kussel 2023-03-27 14:41:47 +02:00
88f1b031a7 Merge pull request #70 from samply/feature/focus Tobias Kussel 2023-03-27 09:38:22 +02:00
bf291c1786 Merge branch 'main' of github.com:samply/bridgehead into feature/focus Enola Knezevic 2023-03-27 09:35:02 +02:00
bf408f9297 slash and quotation marks around blaze path Enola Knezevic 2023-03-27 09:28:55 +02:00
e8eb7b5563 Merge pull request #69 from samply/feature/focus Enola 2023-03-23 15:43:19 +01:00
6530aca843 and proxy name Enola Knezevic 2023-03-23 15:30:28 +01:00
caeb303497 beam app id changed to avoid confusion Enola Knezevic 2023-03-23 15:26:10 +01:00
ebd213e119 focus app name long Enola Knezevic 2023-03-23 15:07:30 +01:00
c2d75044a5 Merge pull request #52 from samply/update_readme_for_installation DavidCroftDKFZ 2023-03-23 09:46:57 +01:00
9c2c6091e6 Merge pull request #68 from samply/feature/focus Enola 2023-03-22 14:26:06 +01:00
1c3785ace7 added missing variables and renamed correctly Enola Knezevic 2023-03-22 11:37:48 +01:00
8f3d2f0947 replace local spot with focus Enola Knezevic 2023-03-22 11:26:55 +01:00
8deafe2023 Merge branch 'main' into update_readme_for_installation Croft 2023-03-22 09:56:11 +01:00
c39518f763 Update README.md Radovan Tomášik 2023-03-17 11:25:56 +01:00
bf3989dcbd Update README.md Radovan Tomášik 2023-03-17 11:17:47 +01:00
c53fe491d9 Update README.md Radovan Tomášik 2023-03-17 11:17:25 +01:00
d7a983000b Update README.md Radovan Tomášik 2023-03-17 11:03:19 +01:00
bedad57f41 Changes for Directory sync PR 53 Croft 2023-03-14 09:59:37 +01:00
bf79ade029 Merge pull request #67 from samply/hotfix/switchToOldProjectName Torben Brenner 2023-03-09 15:54:31 +01:00
25081c1bf4 hotfix: Switch to old Project Name Torben Brenner 2023-03-09 14:56:45 +01:00
7743e2cf01 Merge pull request #66 from samply/use-docker-cache Tobias Kussel 2023-03-09 11:24:12 +01:00
33b50372c6 Pull docker images from DKFZ mirror Martin Lablans 2023-03-09 11:16:34 +01:00
dd4066d1a0 Merge pull request #65 from samply/dont-delete-all-docker-images Martin Lablans 2023-03-08 12:47:05 +01:00
380511d3bb Don't delete docker images if BK is not running Martin Lablans 2023-03-08 10:37:37 +01:00
0ff153ef22 Use project name. Add is-running function. lablans 2023-03-08 09:00:38 +00:00
6bb922fa99 Add Opal feature/opal juarez 2023-03-01 14:06:36 +01:00
ea3e148fd3 Merge pull request #62 from samply/feature/develop-install Tobias Kussel 2023-02-27 14:58:40 +01:00
b0086ee4af Merge pull request #60 from samply/feature/check-for-wsl Tobias Kussel 2023-02-27 13:16:07 +01:00
cedc97477f Add developer install option to the documentation Tobias Kussel 2023-02-27 13:02:59 +01:00
5d38f48f68 Add developer install Tobias Kussel 2023-02-24 16:32:17 +01:00
ac160ab981 Added root cert feature/snap Patrick Skowronek 2023-02-24 12:15:43 +01:00
bfc00b9967 Prevent variable splitting in wsl check and improve error message Tobias Kussel 2023-02-24 11:41:05 +01:00
7a350a8c9b Fix string comparison in WSL check Tobias Kussel 2023-02-24 11:29:06 +01:00
81d09aae29 Switched to aql local spot Patrick Skowronek 2023-02-24 09:58:35 +01:00
a036d0a88c Merge pull request #61 from samply/develop patrickskowronekdkfz 2023-02-24 08:35:59 +01:00
2e7a349aac Fixed docker-compose vars Patrick Skowronek 2023-02-24 07:54:36 +01:00
857e351b88 Support gitmirror for github.com repo Martin Lablans 2023-02-23 18:05:53 +01:00
8b2e99200e Fix typo Martin Lablans 2023-02-23 18:05:34 +01:00
2dc36433bf Fixed naming of site in exliquid script Patrick Skowronek 2023-02-23 14:26:59 +01:00
3023b82bb1 Switch beam images to develop tag Martin Lablans 2023-02-21 09:26:53 +01:00
fdda14c1be Fixed naming of site in exliquid script Patrick Skowronek 2023-02-23 14:26:59 +01:00
052f6f1239 Added snap Patrick Skowronek 2023-02-23 14:25:39 +01:00
4578c77d4b Fix systemd check Tobias Kussel 2023-02-22 15:42:52 +01:00
191e986364 Add check for installation in WSL and for systemd Tobias Kussel 2023-02-22 15:32:21 +01:00
a23f1ae075 Automate installation lablans 2023-02-22 12:06:28 +00:00
dc4829bd5f Add Teiler Core juarez 2023-02-21 15:41:51 +01:00
1dc146d8f4 Add Endpoint for Teiler juarez 2023-02-21 15:37:12 +01:00
5fdeaa7ca4 Merge pull request #59 from samply/switch-images-to-develop Martin Lablans 2023-02-21 11:45:26 +01:00
90773ea92a Switch beam images to develop tag Martin Lablans 2023-02-21 09:26:53 +01:00
8dd1b01842 Updates for PR52 Croft 2023-02-20 16:17:45 +01:00
ee554f24cb Merge remote-tracking branch 'origin/feature/teiler' into feature/teiler p.delpy@dkfz-heidelberg.de 2023-02-20 14:51:40 +01:00
d46c100220 update keykloak config p.delpy@dkfz-heidelberg.de 2023-02-20 14:49:45 +01:00
a90d6855b0 Update Teiler Core config juarez 2023-02-15 16:09:53 +01:00
2785365182 Add original Keycloak config juarez 2023-02-14 15:46:57 +01:00
969469db04 beautiful config p.delpy@dkfz-heidelberg.de 2023-02-14 10:20:19 +01:00
82f6f886db Rename teiler to exporter (bugfix) juarez 2023-02-13 15:35:35 +01:00
7b15e7a3d5 Rename teiler to exporter juarez 2023-02-13 15:29:45 +01:00
9a924df0e5 Configure login extern URLs juarez 2023-02-13 10:23:14 +01:00
1c9edf93d4 Bugfix: services in teiler-ui-compose.yml juarez 2023-02-10 16:04:42 +01:00
168967aace Bugfix: fix modules path juarez 2023-02-10 16:01:04 +01:00
c757c35e65 Change images of dktk-teiler and dktk-keycloak juarez 2023-02-10 15:47:19 +01:00
6afb8d53dc Add nngm and exliquid modules juarez 2023-02-10 13:11:50 +01:00
5a5a95d76d Add Teiler UI and Teiler module juarez 2023-02-10 12:41:26 +01:00
e4ac27061a Merge pull request #57 from samply/feature/idManagementModule Pierre Delpy 2023-02-09 10:22:30 +01:00
5a7dd1d0ae fix: Use Mapped Site Id in Patientlist Torben Brenner 2023-02-09 10:07:05 +01:00
a6975e37ac fix: Added Image Updates for activated Modules Torben Brenner 2023-02-09 09:58:51 +01:00
a1cd5a206e fix: Repaired check for Auto Updates Torben Brenner 2023-02-09 09:50:30 +01:00
64095ac8dd feat: Added Upload ApiKey to Patientlist Torben Brenner 2023-02-09 09:15:29 +01:00
d728ccd886 refactor: Fixated Postgres Version to 15.1 Torben Brenner 2023-02-08 15:02:35 +01:00
c88919c926 feature: Ensured the mapping to legacy ids works Torben Brenner 2023-02-08 14:42:52 +01:00
cdf9c359f0 Merge pull request #56 from samply/feature/idManagementModule_Rebase Torben Brenner 2023-02-08 14:04:43 +01:00
068125c062 Updated environemnt variable names so that they start with "DS_" Croft 2023-02-08 11:03:35 +01:00
e9455a5558 update mtba config p.delpy@dkfz-heidelberg.de 2023-01-27 11:13:49 +01:00
bce28342f9 update docker and host paths p.delpy@dkfz-heidelberg.de 2023-01-18 13:42:36 +01:00
e2d90447f7 refactor: Changed Trigger of the IDM Module Torben Brenner 2022-12-15 16:39:03 +01:00
a3ba98a2fd Added Configuration for Local ID-Management Torben Brenner 2022-12-07 15:46:19 +01:00
73b1993628 Merge pull request #51 from samply/refactor/directoryNames Torben Brenner 2023-02-07 16:27:50 +01:00
2445a59785 refacotr: Restructured passing Patientlist Seeds Torben Brenner 2023-01-27 11:52:09 +01:00
98afeac701 refactor: Use -db as Indicator for Backups Torben Brenner 2023-01-27 11:49:18 +01:00
a37bf79c03 refactor: Added Monitoring for backup permissions Torben Brenner 2023-01-27 11:31:36 +01:00
17d48a3636 refactor: Expect User to select a Backup Directory Torben Brenner 2023-01-27 11:26:31 +01:00
713dc5f4e9 refactor: Move Backups after the Update Torben Brenner 2023-01-27 11:15:09 +01:00
1befa65f35 refactor: Changed Salt for patientlist db password Torben Brenner 2023-01-27 10:59:29 +01:00
0d998ab871 refactor: Move persistent data to named volumes Torben Brenner 2023-01-27 10:55:44 +01:00
1c3fa4fa3f refactor: Changed Paths for persistent Data Torben Brenner 2023-01-17 08:56:02 +01:00
c75c9ed673 Merge pull request #55 from samply/use-beam-main-tag Martin Lablans 2023-02-03 13:38:15 +01:00
6d8e877899 Use beam-proxy "main" tag Martin Lablans 2023-02-03 13:28:44 +01:00
d48d325db6 Merge pull request #54 from samply/update/blaze19 patrickskowronekdkfz 2023-02-02 12:38:43 +01:00
eb37d16b84 Updated Blaze to 0.19 Patrick Skowronek 2023-01-31 15:44:30 +01:00