Commit Graph

Select branches

Hide Pull Requests

bugfix/test-old-blaze

cherry-pick-tmp-pr

coreos-workarounds

dev-dhki

develop

dnpm-broker-connector

dnpm-etl-rewrite

documentation/blaze_resources

ehds2

ehds2_develop

feat/blaze-frontend

feat/cBioPortal

feat/dnpm-dip

feat/nngm

feat/non-ccp-ovis-bridgehead

feat/proxy-escape-chars-readme

feat/selinux

feature/accessTokenFromConfiguration

feature/add-qb-to-cce

feature/addExporterAndTeilerToEric

feature/auto-pr

feature/cBioPortal

feature/cbioportal-datashield

feature/cce

feature/cce-enable-osiris2fhir

feature/cce-project-manager

feature/component-moniotring

feature/dnpm-extra-broker

feature/externalize-versions

feature/feedback-agent

feature/ml-itcc

feature/nngm-rest

feature/opal

feature/opal-client-for-new-token-manager

feature/pscc-lens

feature/qr-basic-auth

feature/remove-rstudio

feature/snap

feature/teiler-for-ccp-and-bbmri

feature/teiler-roles

fix/alternative-proxy-handling

fix/basic-auth-credentials

fix/kr-deactivate-landingpage

fix/traefik-dashboard-route

hotfix/itcc

hotfix/secretsync

itcc-omics-ui

main

mainzelliste-itcc

metadata_fb

pr-secret-sync-gitlab-bbmri

pro/lemedart

prototype/beamFile

qr-bbmri-v2

qr_bbmri

refactor/datashield-auth-config

refactor/independent-modules

refactor/logging

revert-223-feat/add-dkfz-hector-ki-project

set_env_variables_needed_for_fhir2sql

test-switch-branch

test/airgapped-blaze

test/airgapped-blaze-staging

test/ast

test/exporter-no-python

test/keycloak

test/obds2fhir-batch-import

test/onkofdz

test/opal5

test/pscc-spot

test/teiler-dashboard

timakro-patch-1

#1

#10

#100

#101

#102

#103

#104

#105

#106

#107

#108

#109

#11

#110

#111

#112

#113

#114

#115

#116

#117

#118

#119

#12

#120

#121

#122

#123

#124

#125

#126

#127

#128

#129

#13

#130

#131

#132

#133

#134

#136

#137

#138

#139

#14

#140

#141

#142

#143

#144

#145

#146

#147

#148

#149

#15

#150

#151

#152

#153

#154

#155

#156

#157

#158

#159

#16

#160

#161

#162

#163

#164

#165

#17

#175

#176

#177

#178

#179

#18

#180

#181

#182

#183

#184

#185

#186

#187

#188

#189

#19

#190

#191

#192

#193

#194

#195

#196

#197

#198

#199

#2

#20

#200

#201

#202

#203

#204

#205

#206

#207

#208

#209

#21

#210

#211

#212

#213

#214

#215

#216

#217

#218

#219

#22

#220

#221

#222

#223

#224

#225

#226

#227

#228

#229

#23

#230

#232

#233

#234

#235

#235

#236

#237

#238

#239

#239

#24

#240

#241

#242

#243

#243

#244

#245

#246

#247

#248

#249

#25

#250

#251

#252

#253

#254

#255

#255

#256

#257

#258

#259

#26

#260

#261

#262

#264

#265

#266

#267

#268

#269

#27

#270

#271

#272

#273

#274

#275

#276

#277

#278

#279

#28

#280

#281

#282

#283

#284

#285

#286

#287

#288

#289

#29

#290

#291

#292

#293

#294

#295

#296

#297

#298

#299

#3

#30

#300

#301

#302

#303

#304

#305

#306

#307

#308

#309

#31

#310

#311

#312

#313

#314

#315

#316

#317

#318

#319

#32

#320

#321

#322

#323

#324

#325

#326

#327

#328

#329

#33

#330

#331

#333

#334

#335

#337

#338

#339

#34

#340

#341

#342

#343

#344

#345

#346

#347

#348

#349

#35

#350

#351

#352

#353

#354

#355

#356

#357

#358

#359

#36

#360

#361

#362

#363

#364

#365

#366

#367

#367

#368

#369

#37

#370

#371

#372

#373

#374

#375

#376

#376

#377

#378

#379

#38

#380

#381

#382

#382

#383

#384

#385

#386

#387

#388

#389

#39

#390

#391

#392

#393

#394

#394

#395

#396

#396

#4

#40

#41

#42

#43

#44

#45

#46

#47

#48

#49

#5

#51

#52

#53

#54

#55

#56

#57

#58

#59

#6

#60

#61

#62

#63

#64

#65

#66

#67

#68

#69

#7

#70

#71

#72

#73

#74

#75

#76

#77

#78

#79

#8

#80

#81

#82

#83

#84

#85

#86

#87

#88

#89

#9

#90

#91

#92

#93

#94

#95

#96

#97

#98

#99

Mono Color

• 825f1a0b6c Added lemedart Patrick Skowronek 2024-05-08 14:03:11 +02:00
• c4b7620fd6 BBMRI Teiler default templates: bbmri (exporter) and bbmri-qb (reporter) feature/feedback-agent d014n 2024-04-30 14:23:38 +02:00
• 6a21a5b641 Move exporter and teiler to bbmri/modules d014n 2024-04-30 14:16:59 +02:00
• c04ffc5f33 Merge branch 'main' into qr_bbmri d014n 2024-04-30 14:04:34 +02:00
• 714e46f082 Merge pull request #184 from samply/refactor/mainzelliste-return-ssl patrickskowronekdkfz 2024-04-29 08:33:00 +02:00
• 29c2b5ef69 refactor: Ensure Mainzelliste returns SSL in Responses Torben Brenner 2024-04-26 11:29:38 +02:00
• 02ee84df2c Merge pull request #183 from samply/fix/minimal-checks Jan 2024-04-26 09:04:40 +02:00
• 994b0a4124 remove time Patrick Skowronek 2024-04-25 14:03:39 +02:00
• b1bdf48e55 changes for the bbmri-qr d014n 2024-04-18 13:50:14 +02:00
• 433edde75a Merge pull request #182 from samply/revert-177-maintenance/gbn patrickskowronekdkfz 2024-04-18 11:37:11 +02:00
• fe3fc6204a Revert "GBN maintenance mode" patrickskowronekdkfz 2024-04-18 11:01:04 +02:00
• 4b3b13b101 Merge pull request #177 from samply/maintenance/gbn patrickskowronekdkfz 2024-04-17 20:47:35 +02:00
• 1afbf88a76 fix: use only bbmri broker Patrick Skowronek 2024-04-16 09:23:42 +02:00
• 7d5f771181 Merge pull request #181 from samply/fix/secret-sync-args patrickskowronekdkfz 2024-04-16 09:15:53 +02:00
• f9a9baf13d fix: Generate public oidc client when there is no private client janskiba 2024-04-15 15:53:27 +02:00
• d4259406a9 Merge pull request #180 from samply/fix/secret-sync Torben Brenner 2024-04-15 13:18:38 +02:00
• 0745eab7b5 fix: Kill stale secret-sync instances janskiba 2024-04-15 13:12:17 +02:00
• b404277083 Merge pull request #179 from samply/update/focus_0_4_4 patrickskowronekdkfz 2024-04-15 11:02:31 +02:00
• b767b3230f update: dktk focus to 0.4.4 Patrick Skowronek 2024-04-15 10:13:16 +02:00
• dd653a7871 Merge pull request #178 from samply/PierreDelpy-patch-1 Torben Brenner 2024-04-15 09:09:47 +02:00
• 7418861e8c fix typo functions.sh Pierre Delpy 2024-04-15 09:08:56 +02:00
• 94b2c29bc7 GBN maintenance mode Patrick Skowronek 2024-04-15 08:31:57 +02:00
• ac3ff314ff Merge pull request #176 from samply/fix/bash-math patrickskowronekdkfz 2024-04-03 12:59:52 +02:00
• 2831fb9a22 fix: Make math work on bash 4.2 janskiba 2024-04-02 14:36:23 +02:00
• 593f93fffc Turned off obfuscation, because ECDC does not want this feature Gerhard Salvini 2024-03-28 11:06:10 +01:00
• 53cdd49fd7 Improved docs, turned off obfuscation Gerhard Salvini 2024-03-28 11:04:08 +01:00
• b2b9865e8c Improved documentation for EHDS2/ECDC Gerhard Salvini 2024-03-28 09:22:41 +01:00
• 4588960e19 Removed DKFZ URLs and certificates from EHDS2 branch Gerhard Salvini 2024-03-27 16:08:32 +01:00
• 36a97ecc20 Removed ECDC URLs and certificates from dev branch Gerhard Salvini 2024-03-27 16:04:25 +01:00
• 1b82207934 Migrated TransFAIR start logic from launch file to docker-compose Gerhard Salvini 2024-03-26 17:00:42 +01:00
• 7934d912b8 Merge pull request #175 from samply/update/focus_0_4_2 patrickskowronekdkfz 2024-03-22 14:11:09 +01:00
• 70ad318b28 Update focus to 0.4.2 Patrick Skowronek 2024-03-22 13:59:42 +01:00
• 4880c5cc9b Remove dependancy on local blazectl image Gerhard Salvini 2024-03-20 11:43:43 +01:00
• dceac37810 Removed: using local images for cbioportal and cbioportal-database in cbioportal-compose.yml MuhannadBaraghith 2024-01-22 10:21:19 +01:00
• 229f849ba5 Changed: image name of cbioportal root 2024-01-17 15:46:46 +01:00
• f7a8ee39d8 Changed: used images in cbioportal-database and cbioportal from local images to bridgehead MuhannadBaraghith 2024-01-09 13:54:36 +01:00
• 6d276fc28e Updated cbioportal-compose file root 2023-12-15 13:05:54 +01:00
• 66d4629978 Integrating cbioportal root 2023-12-15 12:30:14 +01:00
• 9f97792d6a remove unnecessary volumes of cbioportal juarez 2023-12-05 09:37:05 +01:00
• 316398673d Fix environment variables in cbioportal juarez 2023-11-29 15:46:04 +01:00
• 4449beacb5 Integrating cBioPortal MuhannadBaraghith 2023-11-29 10:29:30 +01:00
• 6da143f348 Merge pull request #164 from samply/feature/datashield patrickskowronekdkfz 2024-03-19 09:55:56 +01:00
• 4fac079aec Merge branch 'main' into feature/datashield patrickskowronekdkfz 2024-03-19 09:52:40 +01:00
• ec6f9302a1 Fix spelling of log WARN Tobias Kussel 2024-03-19 08:47:57 +00:00
• 896b24be9b Use bridgehead log functions in datashield setup Tobias Kussel 2024-03-19 08:45:50 +00:00
• b9b44d2530 Using standardized conditions for starting transfair Gerhard Salvini 2024-03-19 09:07:56 +01:00
• adf8e35ba9 Remove empty file (teiler-ui-compose.yml) djuarezgf 2024-03-18 19:22:10 +01:00
• 480bbe04e7 Changed: TEILER_DEFAULT_LANGUAGE djuarezgf 2024-03-18 16:47:40 +01:00
• d8b9498ef9 Update minimal/docker-compose.yml djuarezgfandJan 2024-03-18 12:45:46 +01:00
• 3180d0fd76 Replace | openssl rsautl -sign with | sha1sum | openssl pkeyutl -sign djuarezgf 2024-03-18 12:44:34 +01:00
• 3a8df378a6 Update lib/functions.sh djuarezgfandTobias Kussel 2024-03-18 12:36:09 +01:00
• 8cb33c2ddc Add warning if ENABLE_EXPORTER is not set or set to true djuarezgf 2024-03-18 12:18:19 +01:00
• 591d95e8db Remove empty line djuarezgf 2024-03-18 12:13:09 +01:00
• 349027e969 Rename oauth2_proxy docker service to oauth2-proxy djuarezgf 2024-03-18 12:12:16 +01:00
• ff06782234 Remove todo djuarezgf 2024-03-18 12:04:04 +01:00
• 6969a7a3bc Remove unnecessary comment djuarezgf 2024-03-18 12:02:53 +01:00
• 0d1f425df0 Auto-build focus and transfair Gerhard Salvini 2024-03-18 11:03:50 +01:00
• 8ea7da64b7 Merge pull request #165 from samply/fix/useCommonLanguage patrickskowronekdkfz 2024-03-15 11:51:37 +01:00
• 6217e28590 fix: use always english output of free command Torben Brenner 2024-03-15 11:48:25 +01:00
• a87e9b9284 Merge pull request #154 from samply/refactor/blazePerformanceTuning Torben Brenner 2024-03-15 09:55:34 +01:00
• 7a33b54416 Merge branch 'ehds2' of https://github.com/samply/bridgehead into ehds2 Gerhard Salvini 2024-03-15 09:48:46 +01:00
• 40e15f4d84 Added extra stuff for EHDS2 Gerhard Salvini 2024-03-15 09:35:49 +01:00
• 1f17fad366 fix: Dont change ownership of all files under /tmp/bridgehead and /var/cache/bridgehead janskiba 2024-03-14 14:09:21 +00:00
• 5a6322fcaa refactor: Move oauth2 proxy related things to datashield setup janskiba 2024-03-14 11:50:08 +00:00
• f88dfb5654 Merge pull request #145 from samply/feature/datashield-central-keycloak djuarezgf 2024-03-13 10:34:13 +01:00
• 1a233b81a4 Merge pull request #163 from samply/refactor/datashield djuarezgf 2024-03-13 10:13:10 +01:00
• e1e523f1ac refactor: tune configuration of blaze according to system memory Torben Brenner 2024-03-11 09:58:30 +01:00
• 7478d804df refactor: Move vars to their setup files janskiba 2024-03-11 10:34:05 +00:00
• 06033c8ea0 Merge pull request #162 from samply/update/focus_0_4_1 Martin Lablans 2024-03-08 16:26:41 +01:00
• eeb17e7bfe feat: added optional resource cache cap Torben Brenner 2024-03-08 13:33:30 +01:00
• 3223c22ff5 Merge pull request #161 from samply/fix/minimal-checks Tobias Kussel 2024-03-08 09:20:05 +01:00
• ea6441fbcb Updated ccp focus to 0.4.1 Patrick Skowronek 2024-03-08 08:33:15 +01:00
• 36c5c1a080 Changed dnpm-configuration to allow different broker Tobias Kussel 2024-03-06 13:21:11 +00:00
• 1a928e6701 Included the new functionality into the README Croft 2024-03-06 11:35:17 +01:00
• 8104711075 Allow user to push star model facts to Directory Croft 2024-03-06 11:26:07 +01:00
• b5c35211f6 Dont test clock skew and priv key for minimal bridgeheads Tobias Kussel 2024-03-05 14:58:06 +00:00
• 3777d4bf05 Add default value for BLAZE_MEMORY_CAP Torben BrennerandTobias Kussel 2024-03-05 10:34:00 +01:00
• 48e198fa0c Merge pull request #159 from samply/feat/dnpm-test-data-generation Tobias Kussel 2024-02-29 08:18:13 +01:00
• ad4430e480 Create env to control dnpm synthetic data generation Tobias Kussel 2024-02-28 10:11:03 +00:00
• 7245ddc720 Merge pull request #158 from samply/main Jan 2024-02-28 11:01:47 +01:00
• 443dcc6ec2 Merge pull request #157 from samply/fix/set-focus-version Tobias Kussel 2024-02-28 10:56:00 +01:00
• b2c933f5e5 fix: set focus version to 0.4.0 Torben Brenner 2024-02-28 10:52:57 +01:00
• db9692795a fix: Fix if syntrax janskiba 2024-02-21 15:28:51 +00:00
• 74eb86f8af fix: Update permissions on update janskiba 2024-02-21 15:25:02 +00:00
• fb4da54297 chore: Add mannheim to datashield sites janskiba 2024-02-19 08:30:49 +00:00
• 3e44dab9f2 chore: Remame datashield mappings to datashield sites janskiba 2024-02-19 08:26:53 +00:00
• f72e7c7799 Changed: replace keycloak with oidc juarez 2024-02-13 18:54:26 +01:00
• 19d0fefe94 Changed: master realm juarez 2024-02-13 18:49:06 +01:00
• 9a1860ccf9 Removed: / from groups juarez 2024-02-13 15:58:24 +01:00
• 8a197ce5c7 Add oauth2_proxy juarez 2023-11-29 09:29:18 +01:00
• 29d2bc0440 Add Keycloak to MTBA juarez 2023-11-27 19:39:16 +01:00
• 2eb56e66c8 Integrate central Keycloak in Teiler juarez 2023-11-17 10:27:12 +01:00
• ef8866b943 fix: Start oauth proxy after forward_proxy is ready janskiba 2024-02-15 13:13:52 +00:00
• cea577bde5 Removed: login-compose juarez 2024-02-14 21:43:12 +01:00
• 97a558dd46 Removed:Login-compose juarez 2024-02-13 15:18:37 +01:00
• 1995997ac2 fix: Wait for forward proxy to start janskiba 2024-02-08 13:39:17 +00:00
• 64250d9d21 refactor: Use beam proxy directly as proxy janskiba 2024-02-08 13:38:37 +00:00
• f3fa1ce712 fix: secret sync account for minimal override janskiba 2024-02-07 16:05:26 +00:00
• b241feecdb fix: Pull oauth2 proxy from harbor janskiba 2024-02-07 14:08:00 +00:00
• 4a9427a1bd fix: Use forward proxy for secret sync janskiba 2024-02-06 16:18:23 +00:00