Commit Graph

Select branches

Hide Pull Requests

bugfix/test-old-blaze

cherry-pick-tmp-pr

develop

dnpm-etl-rewrite

documentation/blaze_resources

ehds2

ehds2_develop

feat/blaze-frontend

feat/cBioPortal

feat/dnpm-dip

feat/nngm

feat/proxy-escape-chars-readme

feat/routine-connector-minor-fixes

feat/selinux

feature/accessTokenFromConfiguration

feature/add-qb-to-cce

feature/addExporterAndTeilerToEric

feature/auto-pr

feature/cBioPortal

feature/cbioportal-datashield

feature/cce

feature/cce-enable-osiris2fhir

feature/component-moniotring

feature/dnpm-extra-broker

feature/externalize-versions

feature/feedback-agent

feature/ml-itcc

feature/nngm-rest

feature/opal

feature/opal-client-for-new-token-manager

feature/pscc-lens

feature/qr-basic-auth

feature/remove-rstudio

feature/snap

feature/teiler-for-ccp-and-bbmri

feature/teiler-roles

fix/alternative-proxy-handling

fix/kr-deactivate-landingpage

fix/traefik-dashboard-route

hotfix/itcc

hotfix/secretsync

main

mainzelliste-itcc

metadata_fb

ovis

pr-secret-sync-gitlab-bbmri

pro/lemedart

prototype/beamFile

qr-bbmri-v2

qr_bbmri

refactor/datashield-auth-config

refactor/independent-modules

refactor/logging

revert-223-feat/add-dkfz-hector-ki-project

set_env_variables_needed_for_fhir2sql

test-switch-branch

test/airgapped-blaze

test/airgapped-blaze-staging

test/ast

test/exporter-no-python

test/keycloak

test/obds2fhir-batch-import

test/onkofdz

test/opal5

test/pscc-spot

test/teiler-dashboard

timakro-patch-1

torbrenner-patch-1

#1

#10

#100

#101

#102

#103

#104

#105

#106

#107

#108

#109

#11

#110

#111

#112

#113

#114

#115

#116

#117

#118

#119

#12

#120

#121

#122

#123

#124

#125

#126

#127

#128

#129

#13

#130

#131

#132

#133

#134

#136

#137

#138

#139

#14

#140

#141

#142

#143

#144

#145

#146

#147

#148

#149

#15

#150

#151

#152

#153

#154

#155

#156

#157

#158

#159

#16

#160

#161

#162

#163

#164

#165

#17

#175

#176

#177

#178

#179

#18

#180

#181

#182

#183

#184

#185

#186

#187

#188

#189

#19

#190

#191

#192

#193

#194

#195

#196

#197

#198

#199

#2

#20

#200

#201

#202

#203

#204

#205

#206

#207

#208

#209

#21

#210

#211

#212

#213

#214

#215

#216

#217

#218

#219

#22

#220

#221

#222

#223

#224

#225

#226

#227

#228

#229

#23

#230

#232

#233

#234

#235

#235

#236

#237

#238

#239

#239

#24

#240

#241

#242

#243

#243

#244

#245

#246

#247

#248

#249

#25

#250

#251

#252

#253

#254

#255

#255

#256

#257

#258

#259

#26

#260

#261

#262

#264

#265

#266

#267

#268

#269

#27

#270

#271

#272

#273

#274

#275

#276

#277

#278

#279

#28

#280

#281

#282

#283

#284

#285

#286

#287

#288

#289

#29

#290

#291

#292

#293

#294

#295

#296

#297

#298

#299

#3

#30

#300

#301

#302

#303

#304

#305

#306

#307

#308

#309

#31

#310

#311

#312

#313

#314

#315

#316

#317

#318

#319

#32

#320

#321

#322

#323

#324

#325

#326

#327

#328

#329

#33

#330

#331

#333

#334

#335

#337

#338

#339

#34

#340

#341

#342

#343

#344

#345

#346

#347

#348

#349

#35

#350

#351

#352

#353

#354

#355

#356

#357

#358

#359

#36

#360

#361

#362

#363

#364

#365

#366

#367

#367

#368

#369

#37

#370

#371

#372

#373

#374

#375

#375

#376

#376

#377

#378

#379

#38

#39

#4

#40

#41

#42

#43

#44

#45

#46

#47

#48

#49

#5

#51

#52

#53

#54

#55

#56

#57

#58

#59

#6

#60

#61

#62

#63

#64

#65

#66

#67

#68

#69

#7

#70

#71

#72

#73

#74

#75

#76

#77

#78

#79

#8

#80

#81

#82

#83

#84

#85

#86

#87

#88

#89

#9

#90

#91

#92

#93

#94

#95

#96

#97

#98

#99

Mono Color

• 24da24d05e Traefik dashboard Martin Lablans 2024-10-01 10:40:24 +02:00
• e740c0410e refactor: put all modules in a common directory to remove redundancy refactor/independent-modules p.delpy@dkfz-heidelberg.de 2024-09-13 08:17:12 +02:00
• d43f6822bc fix landingpage feature/dnpm-extra-broker janskiba 2024-09-12 11:42:45 +00:00
• 65359c2ee6 Feature/pilot projects backup (#227) Pierre Delpy 2024-09-12 10:04:53 +02:00
• 5fc9e01652 Revert "Added DHKI project" revert-223-feat/add-dkfz-hector-ki-project Torben Brenner 2024-09-12 09:44:21 +02:00
• b1de62607f Merge pull request #223 from samply/feat/add-dkfz-hector-ki-project Torben Brenner 2024-09-12 09:44:03 +02:00
• 969f1e7242 fix: remove accidental commit p.delpy@dkfz-heidelberg.de 2024-09-12 09:41:19 +02:00
• 77c870ab22 fix: fix bash path p.delpy@dkfz-heidelberg.de 2024-09-12 09:29:30 +02:00
• f0bdb5c146 fix: re-add modules p.delpy@dkfz-heidelberg.de 2024-09-12 09:24:48 +02:00
• 735e064b03 Update queries_to_cache.conf Pierre Delpy 2024-09-12 09:19:21 +02:00
• 6465dcb0ad feat: added dhki project Torben Brenner 2024-08-16 12:18:22 +02:00
• c585322ee7 Merge pull request #226 from samply/main Pierre Delpy 2024-09-12 08:22:17 +02:00
• 4568e32ffa readme: Data protection group --> officer Martin Lablans 2024-09-04 09:26:37 +02:00
• 2c79799815 Pin the landing page to a version known to work ehds2_develop DavidCroftDKFZ 2024-08-29 15:05:39 +02:00
• 4f9b662223 Pin the landing page to a version known to work ehds2 DavidCroftDKFZ 2024-08-29 15:04:28 +02:00
• ed8dacaa59 Fix fhir2sql db pw generation (#219) davidmscholz 2024-08-29 09:15:22 +02:00
• 3fe781255b feat: Configure beam-connect to trust ds-orchestrator beam proxy (#220) Jan 2024-08-29 09:07:50 +02:00
• 16d478e85b feature: add github action for automated pull request for the pilot branch, after pull requests on main feature/auto-pr Pierre Delpy 2024-08-27 14:41:06 +02:00
• b9f0bf7064 Merge pull request #205 from samply/fix/login-confusion-with-datashield Torben Brenner 2024-08-20 08:22:24 +02:00
• 6228cb3762 fix: specify host for id-management login Torben Brenner 2024-08-19 17:09:10 +02:00
• 05fa323c33 Merge pull request #198 from samply/fix/idmanagement-authentication Torben Brenner 2024-08-19 15:53:54 +02:00
• 33843fe961 fix: switch id-management to keycloak Torben Brenner 2024-07-25 15:56:47 +02:00
• 0f1f88f538 Merge pull request #204 from samply/fix/environment Torben Brenner 2024-08-19 09:15:52 +02:00
• 60acac619d Don't repeat definition of ENVIRONMENT var Martin Lablans 2024-08-19 08:38:34 +02:00
• 376cd03bed Merge pull request #203 from samply/fix/environment Tobias Kussel 2024-08-19 08:33:05 +02:00
• ae95f14030 export ENVIRONMENT Patrick Skowronek 2024-08-19 08:27:20 +02:00
• 25e1d4fb15 Merge pull request #202 from samply/main_fix_dirsync_passwd Martin Lablans 2024-08-15 13:43:39 +02:00
• 18c9e1bb30 Remove DP statement already present in readme. lablans 2024-08-15 11:43:14 +00:00
• de847f309c Provide defaults lablans 2024-08-15 11:40:02 +00:00
• 3496fa7a0f Let Directory sync handle connection with Blaze DavidCroftDKFZ 2024-08-15 13:36:57 +02:00
• 95574f38be Included Blaze dependency DavidCroftDKFZ 2024-08-15 10:33:28 +02:00
• bff316cde1 Merge pull request #201 from samply/update/landing-page Jan 2024-08-15 10:00:09 +02:00
• b8b81b1242 Fixed environment variable passing for Directory sync DavidCroftDKFZ 2024-08-15 09:17:34 +02:00
• 7c560a2e93 Added env to landing-page Patrick Skowronek 2024-08-15 09:10:37 +02:00
• 4a13395408 Merge pull request #200 from samply/reduce-update-interval Martin Lablans 2024-08-05 08:29:15 +02:00
• 35d6a17778 Fix bridgehead update timer time convention Tobias Kussel 2024-08-01 11:39:03 +02:00
• ecd9269022 Add bridgehead update timer persistance Tobias Kussel 2024-08-01 11:38:25 +02:00
• 5227dc57a7 Fix systemd timer description Tobias Kussel 2024-08-01 11:32:15 +02:00
• 62edaf99e0 Reduce bridgehead update interval to once a day at 6am Tobias Kussel 2024-08-01 11:23:56 +02:00
• 775cef59d6 Merge pull request #199 from samply/feat/ds-orchestrator Tobias Kussel 2024-08-01 10:16:41 +02:00
• 9c941853bd Merge pull request #196 from samply/new-dashboard-backend Tobias Kussel 2024-08-01 10:05:32 +02:00
• aca22fb3e3 Merge pull request #144 from samply/documentation/sharing_vm Martin Lablans 2024-08-01 09:52:28 +02:00
• 33a2505517 Move down, rephrase Martin Lablans 2024-08-01 09:51:49 +02:00
• 83b653e0c3 feat: Configure beam-connect to trust ds-orchestrator beam proxy janskiba 2024-07-30 14:17:22 +00:00
• 2e5aeabca8 Rename fhir2sql module files Tobias Kussel 2024-07-30 07:44:47 +00:00
• af44b6b446 Fix depends_on syntax Tobias Kussel 2024-07-30 07:40:49 +00:00
• 5ed07423f3 fix dashboard-compose davidmscholz 2024-07-30 09:24:07 +02:00
• bc0f46ecc9 Merge pull request #197 from samply/beam-tag Martin Lablans 2024-07-29 15:16:53 +02:00
• 4ab10ff71d In ENVIRONMENT=production, use main tag for Samply.Beam. Martin Lablans 2024-07-29 13:50:30 +02:00
• df08d67839 add optional dashboard module davidmscholz 2024-07-29 10:45:00 +02:00
• 964c5324e6 Merge pull request #160 from samply/main_directory_sync_extra_attributes_and_star_model Torben Brenner 2024-07-26 14:09:39 +02:00
• 023be58528 Merge pull request #195 from samply/feature/caching-ccp Torben Brenner 2024-07-26 14:07:15 +02:00
• 8942b923b3 Added comment for consistency with Directory Sync README DavidCroftDKFZ 2024-07-26 09:57:40 +02:00
• e323c2765f Added ECDC Beam Broker site to list of Firewall exceptions DavidCroftDKFZ 2024-07-26 09:51:46 +02:00
• ca93451357 Added ECDC Beam Broker site to list of Firewall exceptions DavidCroftDKFZ 2024-07-26 09:49:13 +02:00
• 3f8bb158bc Merge branch 'main' into main_directory_sync_extra_attributes_and_star_model DavidCroftDKFZ 2024-07-25 16:54:47 +02:00
• cfa85067f0 initialize develop; add itcc and cce p.delpy@dkfz-heidelberg.de 2024-07-25 11:55:51 +02:00
• c3b770b70f Merge pull request #194 from samply/workaround/secondary-cortex-blaze Torben Brenner 2024-07-25 10:32:38 +02:00
• d316f1c798 add caching in focus Pierre Delpy 2024-07-23 13:01:07 +02:00
• 293810f254 Added: exporter with blaze-secondary djuarezgf 2024-07-18 09:54:16 +02:00
• 6b4480c54b workaround: add second blaze p.delpy@dkfz-heidelberg.de 2024-07-17 09:53:08 +02:00
• 892e2c2cf1 Removed misleading text from stop.sh Gerhard Salvini 2024-07-18 12:56:42 +02:00
• 8c1c0de927 Made scripts executable Gerhard Salvini 2024-07-18 12:52:48 +02:00
• 56cdd0dcc4 Got automatic Bridgehead restart to work DavidCroftDKFZ 2024-07-18 12:47:47 +02:00
• 520c560be0 Got systemctl restart to work locally Gerhard Salvini 2024-07-18 12:31:42 +02:00
• 1b9af45991 Replaced tabs with spaces Gerhard Salvini 2024-07-17 09:35:50 +02:00
• bb81617873 Replaced tabs with spaces Gerhard Salvini 2024-07-17 09:34:46 +02:00
• 353fc010cb Cherry picked the stop/start files from ehds2_develop branch DavidCroftDKFZ 2024-07-17 09:27:32 +02:00
• c15c3962a7 Switched to bridgehead user for git to avoid auth problems DavidCroftDKFZ 2024-07-17 09:24:37 +02:00
• e0fe39ab83 Perform git actions with the bridgehead user, to prevent authentication issues DavidCroftDKFZ 2024-07-16 16:58:13 +02:00
• cce76bab84 Updated README for the new run/stop scripts DavidCroftDKFZ 2024-07-16 16:55:08 +02:00
• c27536b566 Cherry picked from ehds2 and updated data upload for new scripts Gerhard Salvini 2024-07-16 16:47:57 +02:00
• f213e6909a Started adding the new scripts to the README Gerhard Salvini 2024-07-16 16:17:30 +02:00
• 6887264a5b Added infrastructure for running ECDC-Bridgehead under systemctl Gerhard Salvini 2024-07-16 16:08:08 +02:00
• 5b2c3d7725 Using bridgehead user for performing git pull Gerhard Salvini 2024-07-16 16:06:10 +02:00
• a92b2eff76 Merge pull request #193 from samply/Fix-patientlisturl-in-obds2fhir-rest-compose.yml Tobias Kussel 2024-07-16 10:59:53 +02:00
• b36c9ae03e Fix patientlisturl in obds2fhir-rest-compose.yml Pierre Delpy 2024-07-16 10:49:23 +02:00
• 16629f3e45 Merge pull request #192 from samply/hotfix/idmanagementFlag Torben Brenner 2024-07-16 10:20:15 +02:00
• 013d6d219b Provided more detailed instructions on uploading data to a Bridgehead DavidCroftDKFZ 2024-07-15 10:28:21 +02:00
• cc228e20d9 Reordered the Bridgehead restart instructions DavidCroftDKFZ 2024-07-15 09:20:18 +02:00
• 153f654397 Deal with multiple data files, update repos DavidCroftDKFZ 2024-07-12 11:07:06 +02:00
• a8a15aaad8 Update repos on start DavidCroftDKFZ 2024-07-12 09:04:08 +02:00
• 2e8b1dc96c Deal with multiple data files Bridgehead User 2024-07-12 08:45:17 +02:00
• 105495d6cd Made compatible with ehds2 branch Gerhard Salvini 2024-07-10 14:51:16 +02:00
• 93e73838c6 Made comments compatible with ehds2 branch DavidCroftDKFZ 2024-07-10 14:39:46 +02:00
• 70aca8e99c Wait longer for Blaze to start DavidCroftDKFZ 2024-07-10 14:34:14 +02:00
• f925c27791 Suggested more robust Bridgehead start DavidCroftDKFZ 2024-07-10 14:26:46 +02:00
• 9e72b04824 Added instructions to stop and start Bridgehead DavidCroftDKFZ 2024-07-10 14:25:21 +02:00
• 350a4c84af Added extra detail relating to EHDS2 DavidCroftDKFZ 2024-07-10 14:20:40 +02:00
• fbe68bc778 Adding more detail to EHDS2-specific installation tasks DavidCroftDKFZ 2024-07-10 14:18:03 +02:00
• 17f372b06c Implement a gentler way of handling clock skew Gerhard Salvini 2024-07-10 14:02:04 +02:00
• 91dc31d039 fix: use correct ID management flag for oBDS2FHIR Pierre Delpy 2024-07-08 13:54:42 +02:00
• 7c54b6bb08 Merge pull request #191 from samply/fix/oauth-redirect patrickskowronekdkfz 2024-07-03 15:10:28 +02:00
• 9e4bc214ce fix: Fix traefik label for oauth2 redirect janskiba 2024-07-03 13:01:02 +00:00
• b52931e46c Pinned Blaze version DavidCroftDKFZ 2024-07-02 14:11:34 +02:00
• a250d52998 Pinned Blaze version, increased Focus retry count Gerhard Salvini 2024-07-02 14:05:38 +02:00
• 94a38155b5 Merge pull request #190 from samply/feature/obds-fhir patrickskowronekdkfz 2024-07-02 09:19:26 +02:00
• 2ee8e0185a feature: upgrade to oBDS2FHIR Pierre Delpy 2024-07-01 12:46:33 +02:00
• f28e3c2cd2 Remove unnecessary default values Martin Lablans 2024-07-01 15:19:44 +02:00
• 91ff51304b Add new dashboard backend Martin Lablans 2024-07-01 14:54:04 +02:00