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Threated-patch-1

bugfix/test-old-blaze

cherry-pick-tmp-pr

develop

dnpm-etl-rewrite

documentation/blaze_resources

ehds2

ehds2_develop

feat/blaze-frontend

feat/cBioPortal

feat/central-rstudio

feat/dnpm-dip

feat/routine-connector-minor-fixes

feature/accessTokenFromConfiguration

feature/add-pscc

feature/add-qb-to-cce

feature/addExporterAndTeilerToEric

feature/authentik

feature/auto-pr

feature/cBioPortal

feature/cbioportal-datashield

feature/component-moniotring

feature/dnpm-extra-broker

feature/exporter-docu

feature/externalize-versions

feature/feedback-agent

feature/nngm-rest

feature/opal

feature/opal-client-for-new-token-manager

feature/qr-basic-auth

feature/snap

feature/teiler-for-ccp-and-bbmri

fix/kr-deactivate-landingpage

main

metadata_fb

ovis

pr-secret-sync-gitlab-bbmri

pro/lemedart

prototype/beamFile

qr-bbmri-v2

qr_bbmri

refactor/datashield-auth-config

refactor/independent-modules

refactor/logging

revert-223-feat/add-dkfz-hector-ki-project

set_env_variables_needed_for_fhir2sql

test-switch-branch

test/airgapped-blaze

test/exporter-no-python

test/obds2fhir-batch-import

test/onkofdz

test/teiler-dashboard

torbrenner-patch-1

transfair-cli

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0b2e64a2d5 add /oauth2/callback and /mtba to Keycloak private client juarez 2023-11-30 17:39:01 +01:00
25ac4d2590 mtba latest juarez 2023-11-30 17:32:51 +01:00
f9b26b6958 Use develop branch for mtba juarez 2023-11-30 17:25:32 +01:00
5d4d0405ab fix: public client generation janskiba 2023-11-30 14:05:07 +00:00
b44a208e08 Better redirect url handeling janskiba 2023-11-30 13:46:08 +00:00
0cd4ededc7 Add oauth2_proxy juarez 2023-11-29 09:29:18 +01:00
f6965859fe Add comment about PASSWORD and DISABLE_AUTH in R-Studio juarez 2023-11-28 16:51:30 +01:00
ae965fddb3 Add proxy to R-Studio for loading R packages juarez 2023-11-28 16:50:36 +01:00
903ef0df9b Add Keycloak to MTBA juarez 2023-11-27 19:39:16 +01:00
e32f484c31 Add keycloak configuration juarez 2023-11-24 08:52:54 +01:00
8486abedd4 Add R-Studio Admin Password juarez 2023-11-23 17:28:39 +01:00
163650f592 Add generate_password function juarez 2023-11-23 15:54:44 +01:00
9ebbf2ed9b Bugfix: Export /var/cache/bridgehead/secrets as environment variables juarez 2023-11-23 14:33:28 +01:00
131b52f57b Account for ip address host values janskiba 2023-11-23 10:28:43 +00:00
043e12b985 Remove port handeling when generating redirect url janskiba 2023-11-23 09:58:34 +00:00
bb076c5d5a Add function generate_redirect_urls juarez 2023-11-23 10:38:50 +01:00
3c8ec73ac3 Update oidc provider to new url janskiba 2023-11-21 10:39:17 +00:00
0015365d1b Generate addtional redirect url janskiba 2023-11-20 11:34:18 +00:00
dc3d5496e1 Integrate central Keycloak in Teiler juarez 2023-11-17 10:27:12 +01:00
93a91326a2 Make sure path exists Jan Skiba 2023-11-16 14:24:41 +01:00
4115319956 Setup hostname earlier Jan Skiba 2023-11-16 14:21:19 +01:00
f854ab58ce Update to new secret-sync semantics janskiba 2023-11-13 16:22:23 +00:00
cec3dfe4cd Add secret sync to the bridgehead janskiba 2023-11-07 14:55:26 +00:00
3d136959e7 Bugfix: Add version in every docker compose file juarez 2023-09-11 13:27:08 +02:00
8e171b71de Remove unnecessary version of docker-compose.override files juarez 2023-08-03 10:35:41 +02:00
d3edb5e143 Bugfix: Add version in every docker compose file juarez 2023-09-11 13:27:08 +02:00
b87d746a20 Remove unnecessary version of docker-compose.override files juarez 2023-08-03 10:35:41 +02:00
afb63306a8 Remove unnecessary version of docker-compose.override files juarez 2023-08-03 10:35:41 +02:00
90ee8d63f7 Externalize postgres version Martin Lablans 2024-02-09 17:14:45 +01:00
8d4f487806 MTBA 1.0.0 juarez 2023-11-29 12:43:58 +01:00
a2c242583e Remove nngmSetup in vars juarez 2023-11-03 17:03:15 +01:00
178867cde7 Prevent creation of volumes Martin Lablans 2023-10-25 12:33:56 +02:00
77240ff92f Use Bridgehead's internal http proxy lablans 2023-10-24 08:33:15 +00:00
876c4efa41 Make Opal use proxy server Martin Lablans 2023-10-24 09:25:36 +02:00
058d1c83e6 Use newest version of beam-connect janskiba 2023-10-23 12:33:56 +00:00
ec6407414b Update export template script: FHIR_QUERY to FHIR_PATH juarez 2023-10-10 15:48:11 +02:00
89c90d3aa0 /var/cache for mtba juarez 2023-09-26 07:45:51 +02:00
0039efa353 Add docu about login in teiler juarez 2023-09-22 17:09:47 +02:00
c1020c569a Bugfix: datashield local.json as array juarez 2023-09-22 15:36:21 +02:00
2237562e6e Prevent anonymous volume creation Martin Lablans 2023-09-22 10:24:10 +02:00
c8fc35576e Bugfix: Exporter and Reporter /var/cache volumes juarez 2023-09-19 16:39:32 +02:00
3dfc4cf57d Postgres 15.4 in datashield, exporter and login juarez 2023-09-19 14:21:15 +02:00
3a6520a668 Update ccp/modules/mtba.md djuarezgf 2023-09-18 12:04:56 +02:00
dcddbf2235 Bugfix: Add version of docker-compose juarez 2023-09-18 12:02:36 +02:00
e2f31b6eeb Make sure copy works and the correct owner is set janskiba 2023-09-15 14:09:06 +00:00
452946aa04 Add all sites janskiba 2023-09-15 11:17:07 +00:00
5c7da0d40d Auto generate mappings janskiba 2023-09-15 09:45:28 +00:00
77145277de Add ccp to /var/cache/bridgehead/* volumes juarez 2023-09-15 15:16:46 +02:00
9cdcf2afb8 Rewrite comments lablans 2023-09-15 08:24:44 +00:00
13a74e5dab Move exporter db to /var/cache/bridgehead lablans 2023-09-15 08:20:24 +00:00
c33726d385 Exporter cache lablans 2023-09-15 08:19:10 +00:00
f38d9f8c19 Rework commented sections lablans 2023-09-15 08:14:12 +00:00
b5ca5ea4a7 Autogenerate maps for Opal's beam-connect. To be completed by @Threated with a map-generator in the script. lablans 2023-09-15 08:12:16 +00:00
862e452f3c Cache opal in /var/cache/bridgehead lablans 2023-09-15 08:11:40 +00:00
4aa8f0f3ba Bugfix: Add version in every docker compose file juarez 2023-09-11 13:27:08 +02:00
ccf0b91f17 #!/bin/bash -e juarez 2023-09-04 16:43:40 +02:00
720783249d Bugfix: LDM_AUTH instead of LDM_PASSWORD juarez 2023-09-04 15:15:34 +02:00
2b3eabe95c Rename Teiler Backend, Teiler Dashboard and Teiler Orchestrator juarez 2023-08-17 18:10:12 +02:00
14aece46f7 Add site to exporter and reporter juarez 2023-08-14 15:52:53 +02:00
ff1f7904ad Add forward proxy to teiler-core juarez 2023-08-14 11:17:44 +02:00
8d38adc91e Bugfix: mtba labels juarez 2023-08-11 17:22:34 +02:00
cfc3c7c90e Bugfix: exporter juarez 2023-08-11 15:23:45 +02:00
963144cc31 Disable datashield juarez 2023-08-11 15:08:08 +02:00
765613b87f Bugfix: MTBA path prefix juarez 2023-08-11 15:07:42 +02:00
2b61775652 Enable datashield juarez 2023-08-11 15:06:54 +02:00
4b0b17424f Comment Keycloak volume juarez 2023-08-10 21:50:52 +02:00
f26a8f7a71 Fix comment in login-compose.yml juarez 2023-08-10 21:43:44 +02:00
973b5828f6 Remove old comment of exporter-setup.sh juarez 2023-08-10 21:41:03 +02:00
839e7a4518 Comment on datashield volume juarez 2023-08-10 20:54:15 +02:00
6cfb42dc9b Comment on export and report volumes juarez 2023-08-10 20:52:34 +02:00
5d8bec53c0 Bugfix: JAVA_OPTS for exporter juarez 2023-08-10 20:36:34 +02:00
c52975f204 Add mtba module documentation juarez 2023-08-10 19:02:41 +02:00
957fa64ce9 Add teiler-ui module documentation juarez 2023-08-10 18:18:50 +02:00
b4805af0a1 Add some docs about beam-connect janskiba 2023-08-10 13:12:09 +00:00
e3b8a7369b Add login module documentation juarez 2023-08-10 14:53:11 +02:00
adeaf433dc Add Exporter module documentation juarez 2023-08-10 14:28:43 +02:00
846e9c23a7 Add DataSHIELD module documentation juarez 2023-08-10 14:08:49 +02:00
bb7451d8c3 Add JAVA_OPTS to reporter and exporter juarez 2023-08-10 13:55:02 +02:00
26165232f0 Enable Login, Teiler and Exporter juarez 2023-08-09 18:15:30 +02:00
7ed24f667d Export and QB Curl templates juarez 2023-08-09 18:12:32 +02:00
d97ac56126 Generate exporter api key automatically juarez 2023-08-09 18:06:32 +02:00
e7f6c0b1a0 Add default language to ccp juarez 2023-08-09 17:13:33 +02:00
c4c4f743d2 Remove updater cron of teiler-core juarez 2023-08-09 17:06:46 +02:00
be9adcbfa2 Remove clean temp files configuration of exporter juarez 2023-08-09 16:57:45 +02:00
10a362c237 Add explanation why is the volume of exporter-db currently so important for us. juarez 2023-08-09 16:45:11 +02:00
75c86b79e8 Add Teiler Admin to Keycloak juarez 2023-08-09 16:29:44 +02:00
a6443a6857 Remove IS_DKTK_SITE juarez 2023-08-09 12:23:29 +02:00
f3745b973a User default user rstudio in rstudio juarez 2023-08-09 12:23:29 +02:00
50d28d293f Generate DATASHIELD_CONNECT_SECRET automatically Martin Lablans 2023-08-04 16:19:06 +02:00
44415369cc Update ccp/modules/datashield-compose.yml Martin Lablans 2023-08-04 16:10:59 +02:00
9b8331ed28 Update ccp/modules/datashield-compose.yml Martin Lablans 2023-08-04 15:30:19 +02:00
73d969e374 Use LDM_PASSWORD for all admin passwords Martin Lablans 2023-08-04 15:29:40 +02:00
840096d1d5 Enable only if true juarez 2023-08-03 15:58:19 +02:00
43c45f0628 Remove todo in rstudio juarez 2023-08-03 15:48:22 +02:00
e182e2fbe6 Remove unnecessary version of docker-compose.override files juarez 2023-08-03 10:35:41 +02:00
c8bafb2461 R-Server rock-base:6.3 juarez 2023-08-03 10:21:42 +02:00
0866cacc5a User postgres if docker.verbis.dkfz.de juarez 2023-08-02 14:38:25 +02:00
a1e76a61b8 Remove ports of beam-connect in datashield-compose.yml juarez 2023-07-19 14:01:17 +02:00
09aa33c912 Generate passwords only if modules are enabled juarez 2023-07-19 13:45:14 +02:00
36ac8d41c8 Add http scheme to exporter juarez 2023-07-18 10:54:24 +02:00