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Author SHA1 Message Date
DavidCroftDKFZ
3496fa7a0f Let Directory sync handle connection with Blaze 
Remove the delayed start, because Directory sync will automatically keep trying to
connect to Blaze if not initially present.
 2024-08-15 13:36:57 +02:00
DavidCroftDKFZ
95574f38be Included Blaze dependency 2024-08-15 10:33:28 +02:00
DavidCroftDKFZ
b8b81b1242 Fixed environment variable passing for Directory sync 
There were problems with the passing of environment variables from
bbmri.conf to the Directory synce container:

* The Directory password variable was misspellt.
* Some useful variables were missing.

Additionally, a delay was added before launching Directory sync,
to give Blaze time to start up.
 2024-08-15 09:17:34 +02:00
Martin Lablans
4a13395408 Merge pull request #200 from samply/reduce-update-interval 
Reduce bridgehead update interval to once a day at 6am
 2024-08-05 08:29:15 +02:00
Tobias Kussel
35d6a17778 Fix bridgehead update timer time convention 
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
 2024-08-01 11:39:03 +02:00
Tobias Kussel
ecd9269022 Add bridgehead update timer persistance 
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
 2024-08-01 11:38:25 +02:00
Tobias Kussel
5227dc57a7 Fix systemd timer description 
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
 2024-08-01 11:32:15 +02:00
Tobias Kussel
62edaf99e0 Reduce bridgehead update interval to once a day at 6am 2024-08-01 11:23:56 +02:00
Tobias Kussel
9c941853bd Merge pull request #196 from samply/new-dashboard-backend 
Add new/additional dashboard backend
 2024-08-01 10:05:32 +02:00
Tobias Kussel
2e5aeabca8 Rename fhir2sql module files 2024-07-30 07:44:47 +00:00
Tobias Kussel
af44b6b446 Fix depends_on syntax 2024-07-30 07:40:49 +00:00
davidmscholz
5ed07423f3 fix dashboard-compose 2024-07-30 09:24:07 +02:00
davidmscholz
df08d67839 add optional dashboard module 2024-07-29 10:45:00 +02:00
Torben Brenner
964c5324e6 Merge pull request #160 from samply/main_directory_sync_extra_attributes_and_star_model 
Allow user to push star model facts to Directory
 2024-07-26 14:09:39 +02:00
Torben Brenner
023be58528 Merge pull request #195 from samply/feature/caching-ccp 
add caching in focus
 2024-07-26 14:07:15 +02:00
DavidCroftDKFZ
8942b923b3 Added comment for consistency with Directory Sync README 2024-07-26 09:57:40 +02:00
DavidCroftDKFZ
3f8bb158bc Merge branch 'main' into main_directory_sync_extra_attributes_and_star_model 2024-07-25 16:54:47 +02:00
Torben Brenner
c3b770b70f Merge pull request #194 from samply/workaround/secondary-cortex-blaze 
Workaround/secondary cortex blaze
 2024-07-25 10:32:38 +02:00
Pierre Delpy
d316f1c798 add caching in focus 2024-07-24 13:56:53 +02:00
djuarezgf
293810f254 Added: exporter with blaze-secondary 2024-07-18 14:06:47 +02:00
p.delpy@dkfz-heidelberg.de
6b4480c54b workaround: add second blaze 2024-07-18 14:06:47 +02:00
Tobias Kussel
a92b2eff76 Merge pull request #193 from samply/Fix-patientlisturl-in-obds2fhir-rest-compose.yml 
Fix patientlisturl in obds2fhir-rest-compose.yml
 2024-07-16 10:59:53 +02:00
Pierre Delpy
b36c9ae03e Fix patientlisturl in obds2fhir-rest-compose.yml 2024-07-16 10:49:23 +02:00
Torben Brenner
16629f3e45 Merge pull request #192 from samply/hotfix/idmanagementFlag 
fix: use correct ID management flag for oBDS2FHIR and MTBA
 2024-07-16 10:20:15 +02:00
Pierre Delpy
91dc31d039 fix: use correct ID management flag for oBDS2FHIR 2024-07-08 14:31:09 +02:00
patrickskowronekdkfz
7c54b6bb08 Merge pull request #191 from samply/fix/oauth-redirect 
fix: Fix traefik label for oauth2 redirect
 2024-07-03 15:10:28 +02:00
janskiba
9e4bc214ce fix: Fix traefik label for oauth2 redirect 2024-07-03 13:01:02 +00:00
patrickskowronekdkfz
94a38155b5 Merge pull request #190 from samply/feature/obds-fhir 
feature: upgrade to oBDS2FHIR
 2024-07-02 09:19:26 +02:00
Pierre Delpy
2ee8e0185a feature: upgrade to oBDS2FHIR 2024-07-02 08:57:15 +02:00
Martin Lablans
f28e3c2cd2 Remove unnecessary default values 2024-07-01 15:19:44 +02:00
Martin Lablans
91ff51304b Add new dashboard backend 2024-07-01 15:14:38 +02:00
Torben Brenner
e28b125b93 Merge pull request #189 from samply/fix/updateBlazeVersion 
fix: set blaze to version 0.28
 2024-06-28 14:31:56 +02:00
Torben Brenner
f7751b9d92 fix: set blaze to version 0.28 
The 0.28 release is not downgradeable, therefore switching again to 0.28
 2024-06-28 14:29:56 +02:00
Torben Brenner
4da71353cc Merge pull request #188 from samply/fix/blazeDktkNotRunning 
Switch to old blaze Version
 2024-06-28 13:59:20 +02:00
Torben Brenner
0db7df1440 Update docker-compose.yml 2024-06-28 13:57:30 +02:00
Enola Knezevic
373ba7a543 Merge pull request #187 from samply/feat/focus-retry 
feat: allow setting focus retry count and increase default
 2024-06-14 17:00:13 +02:00
janskiba
e72c996952 feat: allow setting focus retry count and increase default 2024-06-13 07:29:54 +00:00
Martin Lablans
4fc53c00bf Fix typo 2024-06-11 08:41:35 +02:00
patrickskowronekdkfz
647aa05c73 Merge pull request #186 from samply/feat/journal-logs 
feat: Add logs command for journalctl
 2024-06-05 14:58:35 +02:00
Jan
ec9df1feec Update README.md 
Co-authored-by: patrickskowronekdkfz <86347677+patrickskowronekdkfz@users.noreply.github.com>
 2024-06-05 14:57:42 +02:00
janskiba
a018104e0b feat: Add logs command for journalctl and rename old one to docker-logs 2024-06-05 12:35:44 +00:00
patrickskowronekdkfz
68f06c0d9d Merge pull request #185 from samply/update/focus_main 
switch focus of ccp to tag
 2024-05-21 16:21:22 +02:00
Patrick Skowronek
033da484d1 switch focus of ccp to tag 2024-05-21 16:16:40 +02:00
patrickskowronekdkfz
714e46f082 Merge pull request #184 from samply/refactor/mainzelliste-return-ssl 
Ensure Mainzelliste returns SSL in Responses
 2024-04-29 08:33:00 +02:00
Torben Brenner
29c2b5ef69 refactor: Ensure Mainzelliste returns SSL in Responses 
Before, the Mainzelliste would always use http instead of https then
referring to it self in responses
 2024-04-26 11:29:38 +02:00
patrickskowronekdkfz
433edde75a Merge pull request #182 from samply/revert-177-maintenance/gbn 
Revert "GBN maintenance mode"
 2024-04-18 11:37:11 +02:00
patrickskowronekdkfz
fe3fc6204a Revert "GBN maintenance mode" 2024-04-18 11:01:04 +02:00
patrickskowronekdkfz
4b3b13b101 Merge pull request #177 from samply/maintenance/gbn 
GBN maintenance mode
 2024-04-17 20:47:35 +02:00
Patrick Skowronek
1afbf88a76 fix: use only bbmri broker 2024-04-16 09:23:42 +02:00
patrickskowronekdkfz
7d5f771181 Merge pull request #181 from samply/fix/secret-sync-args 
fix: Generate public oidc client when there is no private client
 2024-04-16 09:15:53 +02:00