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Author SHA1 Message Date
p.delpy@dkfz-heidelberg.de
77c870ab22 fix: fix bash path 2024-09-12 09:29:30 +02:00
p.delpy@dkfz-heidelberg.de
f0bdb5c146 fix: re-add modules 2024-09-12 09:25:38 +02:00
Pierre Delpy
735e064b03 Update queries_to_cache.conf 2024-09-12 09:19:21 +02:00
Torben Brenner
6465dcb0ad feat: added dhki project 2024-09-12 08:47:33 +02:00
Pierre Delpy
c585322ee7 Merge pull request #226 from samply/main 
Update Develop from Main
 2024-09-12 08:22:17 +02:00
Martin Lablans
4568e32ffa readme: Data protection group --> officer 2024-09-04 09:26:37 +02:00
davidmscholz
ed8dacaa59 Fix fhir2sql db pw generation (#219) 
fix postgresql password generation so that the password does not contain problematic characters that mess with the connection string
 2024-08-29 09:15:22 +02:00
Jan
3fe781255b feat: Configure beam-connect to trust ds-orchestrator beam proxy (#220) 2024-08-29 09:07:50 +02:00
Torben Brenner
b9f0bf7064 Merge pull request #205 from samply/fix/login-confusion-with-datashield 
fix: specify host for id-management login
 2024-08-20 08:22:24 +02:00
Torben Brenner
6228cb3762 fix: specify host for id-management login 
Otherwise traefik will match the route with the one specified in datashield-compose.yml
 2024-08-19 17:09:10 +02:00
Torben Brenner
05fa323c33 Merge pull request #198 from samply/fix/idmanagement-authentication 
Switch ID-Management to Keycloak from Samply.Auth
 2024-08-19 15:53:54 +02:00
Torben Brenner
33843fe961 fix: switch id-management to keycloak 2024-08-19 14:43:21 +02:00
Torben Brenner
0f1f88f538 Merge pull request #204 from samply/fix/environment 
Don't repeat definition of ENVIRONMENT var
 2024-08-19 09:15:52 +02:00
Martin Lablans
60acac619d Don't repeat definition of ENVIRONMENT var 2024-08-19 08:38:34 +02:00
Tobias Kussel
376cd03bed Merge pull request #203 from samply/fix/environment 
export ENVIRONMENT
 2024-08-19 08:33:05 +02:00
Patrick Skowronek
ae95f14030 export ENVIRONMENT 2024-08-19 08:27:20 +02:00
Martin Lablans
25e1d4fb15 Merge pull request #202 from samply/main_fix_dirsync_passwd 
Fixed environment variable passing for Directory sync
 2024-08-15 13:43:39 +02:00
lablans
18c9e1bb30 Remove DP statement already present in readme. 2024-08-15 11:43:14 +00:00
lablans
de847f309c Provide defaults 2024-08-15 11:40:44 +00:00
DavidCroftDKFZ
3496fa7a0f Let Directory sync handle connection with Blaze 
Remove the delayed start, because Directory sync will automatically keep trying to
connect to Blaze if not initially present.
 2024-08-15 13:36:57 +02:00
DavidCroftDKFZ
95574f38be Included Blaze dependency 2024-08-15 10:33:28 +02:00
Jan
bff316cde1 Merge pull request #201 from samply/update/landing-page 
Added env to landing-page
 2024-08-15 10:00:09 +02:00
DavidCroftDKFZ
b8b81b1242 Fixed environment variable passing for Directory sync 
There were problems with the passing of environment variables from
bbmri.conf to the Directory synce container:

* The Directory password variable was misspellt.
* Some useful variables were missing.

Additionally, a delay was added before launching Directory sync,
to give Blaze time to start up.
 2024-08-15 09:17:34 +02:00
Patrick Skowronek
7c560a2e93 Added env to landing-page 2024-08-15 09:10:37 +02:00
Martin Lablans
4a13395408 Merge pull request #200 from samply/reduce-update-interval 
Reduce bridgehead update interval to once a day at 6am
 2024-08-05 08:29:15 +02:00
Tobias Kussel
35d6a17778 Fix bridgehead update timer time convention 
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
 2024-08-01 11:39:03 +02:00
Tobias Kussel
ecd9269022 Add bridgehead update timer persistance 
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
 2024-08-01 11:38:25 +02:00
Tobias Kussel
5227dc57a7 Fix systemd timer description 
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
 2024-08-01 11:32:15 +02:00
Tobias Kussel
62edaf99e0 Reduce bridgehead update interval to once a day at 6am 2024-08-01 11:23:56 +02:00
Tobias Kussel
775cef59d6 Merge pull request #199 from samply/feat/ds-orchestrator 
Configure beam-connect to trust ds-orchestrator beam proxy
 2024-08-01 10:16:41 +02:00
Tobias Kussel
9c941853bd Merge pull request #196 from samply/new-dashboard-backend 
Add new/additional dashboard backend
 2024-08-01 10:05:32 +02:00
Martin Lablans
aca22fb3e3 Merge pull request #144 from samply/documentation/sharing_vm 
Recommendation for standalone Bridgehead
 2024-08-01 09:52:28 +02:00
Martin Lablans
33a2505517 Move down, rephrase 2024-08-01 09:51:49 +02:00
janskiba
83b653e0c3 feat: Configure beam-connect to trust ds-orchestrator beam proxy 2024-07-31 07:18:30 +00:00
Tobias Kussel
2e5aeabca8 Rename fhir2sql module files 2024-07-30 07:44:47 +00:00
Tobias Kussel
af44b6b446 Fix depends_on syntax 2024-07-30 07:40:49 +00:00
davidmscholz
5ed07423f3 fix dashboard-compose 2024-07-30 09:24:07 +02:00
Martin Lablans
bc0f46ecc9 Merge pull request #197 from samply/beam-tag 
In ENVIRONMENT=production, use main tag for Samply.Beam.
 2024-07-29 15:16:53 +02:00
Martin Lablans
4ab10ff71d In ENVIRONMENT=production, use main tag for Samply.Beam. 2024-07-29 13:50:30 +02:00
davidmscholz
df08d67839 add optional dashboard module 2024-07-29 10:45:00 +02:00
Torben Brenner
964c5324e6 Merge pull request #160 from samply/main_directory_sync_extra_attributes_and_star_model 
Allow user to push star model facts to Directory
 2024-07-26 14:09:39 +02:00
Torben Brenner
023be58528 Merge pull request #195 from samply/feature/caching-ccp 
add caching in focus
 2024-07-26 14:07:15 +02:00
DavidCroftDKFZ
8942b923b3 Added comment for consistency with Directory Sync README 2024-07-26 09:57:40 +02:00
DavidCroftDKFZ
3f8bb158bc Merge branch 'main' into main_directory_sync_extra_attributes_and_star_model 2024-07-25 16:54:47 +02:00
p.delpy@dkfz-heidelberg.de
cfa85067f0 initialize develop; add itcc and cce 2024-07-25 12:44:39 +02:00
Torben Brenner
c3b770b70f Merge pull request #194 from samply/workaround/secondary-cortex-blaze 
Workaround/secondary cortex blaze
 2024-07-25 10:32:38 +02:00
Pierre Delpy
d316f1c798 add caching in focus 2024-07-24 13:56:53 +02:00
djuarezgf
293810f254 Added: exporter with blaze-secondary 2024-07-18 14:06:47 +02:00
p.delpy@dkfz-heidelberg.de
6b4480c54b workaround: add second blaze 2024-07-18 14:06:47 +02:00
Tobias Kussel
a92b2eff76 Merge pull request #193 from samply/Fix-patientlisturl-in-obds2fhir-rest-compose.yml 
Fix patientlisturl in obds2fhir-rest-compose.yml
 2024-07-16 10:59:53 +02:00