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bridgehead
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915 Commits

Author SHA1 Message Date
DavidCroftDKFZ b8b81b1242 Fixed environment variable passing for Directory sync 
There were problems with the passing of environment variables from
bbmri.conf to the Directory synce container:

* The Directory password variable was misspellt.
* Some useful variables were missing.

Additionally, a delay was added before launching Directory sync,
to give Blaze time to start up.
 2024-08-15 09:17:34 +02:00
Martin Lablans 4a13395408
Merge pull request #200 from samply/reduce-update-interval 
Reduce bridgehead update interval to once a day at 6am
 2024-08-05 08:29:15 +02:00
Tobias Kussel 35d6a17778
Fix bridgehead update timer time convention 
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
 2024-08-01 11:39:03 +02:00
Tobias Kussel ecd9269022
Add bridgehead update timer persistance 
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
 2024-08-01 11:38:25 +02:00
Tobias Kussel 5227dc57a7
Fix systemd timer description 
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
 2024-08-01 11:32:15 +02:00
Tobias Kussel 62edaf99e0 Reduce bridgehead update interval to once a day at 6am 2024-08-01 11:23:56 +02:00
Tobias Kussel 9c941853bd
Merge pull request #196 from samply/new-dashboard-backend 
Add new/additional dashboard backend
 2024-08-01 10:05:32 +02:00
Tobias Kussel 2e5aeabca8 Rename fhir2sql module files 2024-07-30 07:44:47 +00:00
Tobias Kussel af44b6b446 Fix depends_on syntax 2024-07-30 07:40:49 +00:00
davidmscholz 5ed07423f3 fix dashboard-compose 2024-07-30 09:24:07 +02:00
davidmscholz df08d67839 add optional dashboard module 2024-07-29 10:45:00 +02:00
Torben Brenner 964c5324e6
Merge pull request #160 from samply/main_directory_sync_extra_attributes_and_star_model 
Allow user to push star model facts to Directory
 2024-07-26 14:09:39 +02:00
Torben Brenner 023be58528
Merge pull request #195 from samply/feature/caching-ccp 
add caching in focus
 2024-07-26 14:07:15 +02:00
DavidCroftDKFZ 8942b923b3 Added comment for consistency with Directory Sync README 2024-07-26 09:57:40 +02:00
DavidCroftDKFZ 3f8bb158bc Merge branch 'main' into main_directory_sync_extra_attributes_and_star_model 2024-07-25 16:54:47 +02:00
Torben Brenner c3b770b70f
Merge pull request #194 from samply/workaround/secondary-cortex-blaze 
Workaround/secondary cortex blaze
 2024-07-25 10:32:38 +02:00
Pierre Delpy d316f1c798 add caching in focus 2024-07-24 13:56:53 +02:00
djuarezgf 293810f254 Added: exporter with blaze-secondary 2024-07-18 14:06:47 +02:00
p.delpy@dkfz-heidelberg.de 6b4480c54b workaround: add second blaze 2024-07-18 14:06:47 +02:00
Tobias Kussel a92b2eff76
Merge pull request #193 from samply/Fix-patientlisturl-in-obds2fhir-rest-compose.yml 
Fix patientlisturl in obds2fhir-rest-compose.yml
 2024-07-16 10:59:53 +02:00
Pierre Delpy b36c9ae03e
Fix patientlisturl in obds2fhir-rest-compose.yml 2024-07-16 10:49:23 +02:00
Torben Brenner 16629f3e45
Merge pull request #192 from samply/hotfix/idmanagementFlag 
fix: use correct ID management flag for oBDS2FHIR and MTBA
 2024-07-16 10:20:15 +02:00
Pierre Delpy 91dc31d039 fix: use correct ID management flag for oBDS2FHIR 2024-07-08 14:31:09 +02:00
patrickskowronekdkfz 7c54b6bb08
Merge pull request #191 from samply/fix/oauth-redirect 
fix: Fix traefik label for oauth2 redirect
 2024-07-03 15:10:28 +02:00
janskiba 9e4bc214ce fix: Fix traefik label for oauth2 redirect 2024-07-03 13:01:02 +00:00
patrickskowronekdkfz 94a38155b5
Merge pull request #190 from samply/feature/obds-fhir 
feature: upgrade to oBDS2FHIR
 2024-07-02 09:19:26 +02:00
Pierre Delpy 2ee8e0185a feature: upgrade to oBDS2FHIR 2024-07-02 08:57:15 +02:00
Martin Lablans f28e3c2cd2 Remove unnecessary default values 2024-07-01 15:19:44 +02:00
Martin Lablans 91ff51304b Add new dashboard backend 2024-07-01 15:14:38 +02:00
Torben Brenner e28b125b93
Merge pull request #189 from samply/fix/updateBlazeVersion 
fix: set blaze to version 0.28
 2024-06-28 14:31:56 +02:00
Torben Brenner f7751b9d92 fix: set blaze to version 0.28 
The 0.28 release is not downgradeable, therefore switching again to 0.28
 2024-06-28 14:29:56 +02:00
Torben Brenner 4da71353cc
Merge pull request #188 from samply/fix/blazeDktkNotRunning 
Switch to old blaze Version
 2024-06-28 13:59:20 +02:00
Torben Brenner 0db7df1440
Update docker-compose.yml 2024-06-28 13:57:30 +02:00
Enola Knezevic 373ba7a543
Merge pull request #187 from samply/feat/focus-retry 
feat: allow setting focus retry count and increase default
 2024-06-14 17:00:13 +02:00
janskiba e72c996952 feat: allow setting focus retry count and increase default 2024-06-13 07:29:54 +00:00
Martin Lablans 4fc53c00bf Fix typo 2024-06-11 08:41:35 +02:00
patrickskowronekdkfz 647aa05c73
Merge pull request #186 from samply/feat/journal-logs 
feat: Add logs command for journalctl
 2024-06-05 14:58:35 +02:00
Jan ec9df1feec
Update README.md 
Co-authored-by: patrickskowronekdkfz <86347677+patrickskowronekdkfz@users.noreply.github.com>
 2024-06-05 14:57:42 +02:00
janskiba a018104e0b feat: Add logs command for journalctl and rename old one to docker-logs 2024-06-05 12:35:44 +00:00
patrickskowronekdkfz 68f06c0d9d
Merge pull request #185 from samply/update/focus_main 
switch focus of ccp to tag
 2024-05-21 16:21:22 +02:00
Patrick Skowronek 033da484d1 switch focus of ccp to tag 2024-05-21 16:16:40 +02:00
patrickskowronekdkfz 714e46f082
Merge pull request #184 from samply/refactor/mainzelliste-return-ssl 
Ensure Mainzelliste returns SSL in Responses
 2024-04-29 08:33:00 +02:00
Torben Brenner 29c2b5ef69 refactor: Ensure Mainzelliste returns SSL in Responses 
Before, the Mainzelliste would always use http instead of https then
referring to it self in responses
 2024-04-26 11:29:38 +02:00
patrickskowronekdkfz 433edde75a
Merge pull request #182 from samply/revert-177-maintenance/gbn 
Revert "GBN maintenance mode"
 2024-04-18 11:37:11 +02:00
patrickskowronekdkfz fe3fc6204a
Revert "GBN maintenance mode" 2024-04-18 11:01:04 +02:00
patrickskowronekdkfz 4b3b13b101
Merge pull request #177 from samply/maintenance/gbn 
GBN maintenance mode
 2024-04-17 20:47:35 +02:00
Patrick Skowronek 1afbf88a76 fix: use only bbmri broker 2024-04-16 09:23:42 +02:00
patrickskowronekdkfz 7d5f771181
Merge pull request #181 from samply/fix/secret-sync-args 
fix: Generate public oidc client when there is no private client
 2024-04-16 09:15:53 +02:00
janskiba f9a9baf13d fix: Generate public oidc client when there is no private client 2024-04-15 15:53:27 +02:00
Torben Brenner d4259406a9
Merge pull request #180 from samply/fix/secret-sync 
fix: Kill stale secret-sync instances
 2024-04-15 13:18:38 +02:00