fix: cce

bridgehead

@@ -180,13 +180,6 @@ case "$ACTION" in
 		;;
 	postRun | postUpdate)
 		;;
-	send-file)
-		loadVars
-		log "WARNING" "Your are about to send a file to another bridgehead in your network!"
-		read -p "Please name the bridgehead you want to send the file to (proxy-id): " RECEIVER_PROXY_ID
-        read -p "Continue? (Y/N): " confirm && [[ $confirm == [yY] || $confirm == [yY][eE][sS] ]] || exit 1
-		exec $COMPOSE -p $PROJECT -f ./modules/beam-file-compose.yml --profile beam-file-sender run beam-file-sender send --to beamfile.$RECEIVER_PROXY_ID /data/outfile
-		;;
 	*)
 		printUsage
 		exit 1

cce/docker-compose.yml

@@ -22,7 +22,7 @@ services:
       - "traefik.http.routers.blaze_cce.tls=true"
 
   focus:
-    image: docker.verbis.dkfz.de/cache/samply/focus:${FOCUS_TAG}
+    image: docker.verbis.dkfz.de/cache/samply/focus:${FOCUS_TAG}-dktk
     container_name: bridgehead-focus
     environment:
       API_KEY: ${FOCUS_BEAM_SECRET_SHORT}
@@ -34,6 +34,7 @@ services:
       EPSILON: 0.28
       QUERIES_TO_CACHE: '/queries_to_cache.conf'
       ENDPOINT_TYPE: ${FOCUS_ENDPOINT_TYPE:-blaze}
+      CQL_PROJECTS_ENABLED: "cce"
     volumes:
       - /srv/docker/bridgehead/cce/queries_to_cache.conf:/queries_to_cache.conf:ro
     depends_on:

cce/modules/lens-compose.yml

@@ -17,6 +17,7 @@ services:
       BEAM_PROXY_ID: ${SITE_ID}
       BEAM_BROKER_ID: ${BROKER_ID}
       BEAM_APP_ID: "focus"
+      PROJECT_METADATA: "cce"
     depends_on:
       - "beam-proxy"
     labels:

dhki/docker-compose.yml

@@ -45,7 +45,6 @@ services:
       BROKER_URL: ${BROKER_URL}
       PROXY_ID: ${PROXY_ID}
       APP_focus_KEY: ${FOCUS_BEAM_SECRET_SHORT}
-      APP_beamfilesend_KEY: ${BEAM_FILE_SEND_SECRET}
       PRIVKEY_FILE: /run/secrets/proxy.pem
       ALL_PROXY: http://forward_proxy:3128
       TLS_CA_CERTIFICATES_DIR: /conf/trusted-ca-certs

dhki/vars

@@ -5,7 +5,6 @@ FOCUS_BEAM_SECRET_SHORT="$(cat /proc/sys/kernel/random/uuid | sed 's/[-]//g' | h
 FOCUS_RETRY_COUNT=${FOCUS_RETRY_COUNT:-64}
 SUPPORT_EMAIL=support-ccp@dkfz-heidelberg.de
 PRIVATEKEYFILENAME=/etc/bridgehead/pki/${SITE_ID}.priv.pem
-BEAM_FILE_SEND_SECRET="$(echo \"beam-file-send-salt\" | openssl pkeyutl -sign -inkey /etc/bridgehead/pki/${SITE_ID}.priv.pem | base64 | head -c 30)"
 
 BROKER_URL_FOR_PREREQ=$BROKER_URL
 
@@ -25,5 +24,4 @@ do
 done
 
 transfairSetup
-scoutSetup
-beamFileSetup
+scoutSetup

itcc/docker-compose.yml

@@ -22,7 +22,7 @@ services:
       - "traefik.http.routers.blaze_itcc.tls=true"
 
   focus:
-    image: docker.verbis.dkfz.de/cache/samply/focus:${FOCUS_TAG}
+    image: docker.verbis.dkfz.de/cache/samply/focus:${FOCUS_TAG}-dktk
     container_name: bridgehead-focus
     environment:
       API_KEY: ${FOCUS_BEAM_SECRET_SHORT}
@@ -34,6 +34,7 @@ services:
       EPSILON: 0.28
       QUERIES_TO_CACHE: '/queries_to_cache.conf'
       ENDPOINT_TYPE: ${FOCUS_ENDPOINT_TYPE:-blaze}
+      CQL_PROJECTS_ENABLED: "itcc"
     volumes:
       - /srv/docker/bridgehead/itcc/queries_to_cache.conf:/queries_to_cache.conf:ro
     depends_on:

itcc/modules/lens-compose.yml

@@ -17,6 +17,7 @@ services:
       BEAM_PROXY_ID: ${SITE_ID}
       BEAM_BROKER_ID: ${BROKER_ID}
       BEAM_APP_ID: "focus"
+      PROJECT_METADATA: "itcc"
     depends_on:
       - "beam-proxy"
     labels:

lib/functions.sh

@@ -337,8 +337,7 @@ function sync_secrets() {
 }
 
 function secret_sync_gitlab_token() {
-    if [ "$PROJECT" == "minimal" ]; then
-        log "INFO" "Not running Secret Sync for project minimal"
+    if [[ "$PROJECT" != "dktk" && "$PROJECT" != "bbmri" ]]; then
         return
     fi
     # Map the origin of the git repository /etc/bridgehead to the prefix recognized by Secret Sync
@@ -398,7 +397,7 @@ function secret_sync_gitlab_token() {
     else
         log "WARN" "Secret Sync failed"
         # Remove the git credential helper
-        git -C /etc/bridgehead config --unset credential.helper
+        git -C /etc/bridgehead config --unset credential.helpera
     fi
 
     # In the past the git credential helper was also set for /srv/docker/bridgehead but never used.

modules/beam-file-compose.yml

@@ -1,35 +0,0 @@
-# NOTE: Current implementation is restricted to a bridgehead only being able to either upload or download data
-services:
-  beam-file-sender:
-    image: samply/beam-file:${BEAM_FILE_TAG}
-    container_name: bridgehead-beam-file-sender
-    environment:
-      - BEAM_ID=beamfilesend.${PROXY_ID}
-      - BEAM_SECRET=${BEAM_FILE_SEND_SECRET}
-      - BEAM_URL=http://beam-proxy:8081
-      - BIND_ADDR=0.0.0.0:8085
-      - API_KEY=${BEAM_FILE_API_KEY}
-    # Only uncomment if your are sure what to do
-    # ports:
-    #   - 8085:8085
-    volumes:
-      - /var/cache/bridgehead/beam-file-out/:/data
-    profiles: ["beam-file-sender"]
-
-  beam-file-receiver:
-    image: samply/beam-file:${BEAM_FILE_TAG}
-    container_name: bridgehead-beam-file-receiver
-    environment:
-      - BEAM_ID=beamfile.${PROXY_ID}
-      - BEAM_SECRET=${BEAM_FILE_SECRET}
-      - BEAM_URL=http://beam-proxy:8081
-      - API_KEY=${BEAM_FILE_API_KEY}
-    command: ["receive", "save", "--outdir", "/data"]
-    volumes:
-      - /var/cache/bridgehead/beam-file/:/data
-    profiles: ["beam-file-receiver"]
-
-  beam-proxy:
-    environment:
-      APP_beamfile_KEY: ${BEAM_FILE_SECRET}
-    profiles: ["beam-file-receiver"]

modules/beam-file-setup.sh

@@ -1,11 +0,0 @@
-#!/bin/bash -e
-
-function beamFileSetup() {
-    if [ -n "$ENABLE_BEAM_FILE_RECEIVER" ]; then
-       echo "Starting beam file in receiver mode"
-       OVERRIDE+=" -f ./modules/beam-file-compose.yml --profile beam-file-receiver"
-       BEAM_FILE_SECRET="$(cat /proc/sys/kernel/random/uuid | sed 's/[-]//g' | head -c 20)"
-       BEAM_FILE_API_KEY="$(cat /proc/sys/kernel/random/uuid | sed 's/[-]//g' | head -c 20)"
-       log INFO "Beam File in Receiver Mode available uses ApiKey ${BEAM_FILE_API_KEY}"
-    fi
-}

versions/test

@@ -3,5 +3,4 @@ BEAM_TAG=develop
 BLAZE_TAG=main
 POSTGRES_TAG=15.13-alpine
 TEILER_DASHBOARD_TAG=develop
-MTBA_TAG=develop
-BEAM_FILE_TAG=task-based-files
+MTBA_TAG=develop