Pierre Delpy
3224be4f66
test selfdesigned workflow take 1
2024-08-27 13:28:24 +02:00
Pierre Delpy
9016f51a70
test backport main take 1
2024-08-27 13:16:29 +02:00
Torben Brenner
b9f0bf7064
Merge pull request #205 from samply/fix/login-confusion-with-datashield
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fix: specify host for id-management login
2024-08-20 08:22:24 +02:00
Torben Brenner
6228cb3762
fix: specify host for id-management login
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Otherwise traefik will match the route with the one specified in datashield-compose.yml
2024-08-19 17:09:10 +02:00
Torben Brenner
05fa323c33
Merge pull request #198 from samply/fix/idmanagement-authentication
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Switch ID-Management to Keycloak from Samply.Auth
2024-08-19 15:53:54 +02:00
Torben Brenner
33843fe961
fix: switch id-management to keycloak
2024-08-19 14:43:21 +02:00
Torben Brenner
0f1f88f538
Merge pull request #204 from samply/fix/environment
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Don't repeat definition of ENVIRONMENT var
2024-08-19 09:15:52 +02:00
Martin Lablans
60acac619d
Don't repeat definition of ENVIRONMENT var
2024-08-19 08:38:34 +02:00
Tobias Kussel
376cd03bed
Merge pull request #203 from samply/fix/environment
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export ENVIRONMENT
2024-08-19 08:33:05 +02:00
Patrick Skowronek
ae95f14030
export ENVIRONMENT
2024-08-19 08:27:20 +02:00
Martin Lablans
25e1d4fb15
Merge pull request #202 from samply/main_fix_dirsync_passwd
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Fixed environment variable passing for Directory sync
2024-08-15 13:43:39 +02:00
lablans
18c9e1bb30
Remove DP statement already present in readme.
2024-08-15 11:43:14 +00:00
lablans
de847f309c
Provide defaults
2024-08-15 11:40:44 +00:00
DavidCroftDKFZ
3496fa7a0f
Let Directory sync handle connection with Blaze
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Remove the delayed start, because Directory sync will automatically keep trying to
connect to Blaze if not initially present.
2024-08-15 13:36:57 +02:00
DavidCroftDKFZ
95574f38be
Included Blaze dependency
2024-08-15 10:33:28 +02:00
Jan
bff316cde1
Merge pull request #201 from samply/update/landing-page
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Added env to landing-page
2024-08-15 10:00:09 +02:00
DavidCroftDKFZ
b8b81b1242
Fixed environment variable passing for Directory sync
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There were problems with the passing of environment variables from
bbmri.conf to the Directory synce container:
* The Directory password variable was misspellt.
* Some useful variables were missing.
Additionally, a delay was added before launching Directory sync,
to give Blaze time to start up.
2024-08-15 09:17:34 +02:00
Patrick Skowronek
7c560a2e93
Added env to landing-page
2024-08-15 09:10:37 +02:00
Martin Lablans
4a13395408
Merge pull request #200 from samply/reduce-update-interval
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Reduce bridgehead update interval to once a day at 6am
2024-08-05 08:29:15 +02:00
Tobias Kussel
35d6a17778
Fix bridgehead update timer time convention
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Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com >
2024-08-01 11:39:03 +02:00
Tobias Kussel
ecd9269022
Add bridgehead update timer persistance
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Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com >
2024-08-01 11:38:25 +02:00
Tobias Kussel
5227dc57a7
Fix systemd timer description
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Co-authored-by: Jan <59206115+Threated@users.noreply.github.com >
2024-08-01 11:32:15 +02:00
Tobias Kussel
62edaf99e0
Reduce bridgehead update interval to once a day at 6am
2024-08-01 11:23:56 +02:00
Tobias Kussel
9c941853bd
Merge pull request #196 from samply/new-dashboard-backend
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Add new/additional dashboard backend
2024-08-01 10:05:32 +02:00
Tobias Kussel
2e5aeabca8
Rename fhir2sql module files
2024-07-30 07:44:47 +00:00
Tobias Kussel
af44b6b446
Fix depends_on syntax
2024-07-30 07:40:49 +00:00
davidmscholz
5ed07423f3
fix dashboard-compose
2024-07-30 09:24:07 +02:00
davidmscholz
df08d67839
add optional dashboard module
2024-07-29 10:45:00 +02:00
Torben Brenner
964c5324e6
Merge pull request #160 from samply/main_directory_sync_extra_attributes_and_star_model
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Allow user to push star model facts to Directory
2024-07-26 14:09:39 +02:00
Torben Brenner
023be58528
Merge pull request #195 from samply/feature/caching-ccp
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add caching in focus
2024-07-26 14:07:15 +02:00
DavidCroftDKFZ
8942b923b3
Added comment for consistency with Directory Sync README
2024-07-26 09:57:40 +02:00
DavidCroftDKFZ
3f8bb158bc
Merge branch 'main' into main_directory_sync_extra_attributes_and_star_model
2024-07-25 16:54:47 +02:00
Torben Brenner
c3b770b70f
Merge pull request #194 from samply/workaround/secondary-cortex-blaze
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Workaround/secondary cortex blaze
2024-07-25 10:32:38 +02:00
Pierre Delpy
d316f1c798
add caching in focus
2024-07-24 13:56:53 +02:00
djuarezgf
293810f254
Added: exporter with blaze-secondary
2024-07-18 14:06:47 +02:00
p.delpy@dkfz-heidelberg.de
6b4480c54b
workaround: add second blaze
2024-07-18 14:06:47 +02:00
Tobias Kussel
a92b2eff76
Merge pull request #193 from samply/Fix-patientlisturl-in-obds2fhir-rest-compose.yml
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Fix patientlisturl in obds2fhir-rest-compose.yml
2024-07-16 10:59:53 +02:00
Pierre Delpy
b36c9ae03e
Fix patientlisturl in obds2fhir-rest-compose.yml
2024-07-16 10:49:23 +02:00
Torben Brenner
16629f3e45
Merge pull request #192 from samply/hotfix/idmanagementFlag
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fix: use correct ID management flag for oBDS2FHIR and MTBA
2024-07-16 10:20:15 +02:00
Pierre Delpy
91dc31d039
fix: use correct ID management flag for oBDS2FHIR
2024-07-08 14:31:09 +02:00
patrickskowronekdkfz
7c54b6bb08
Merge pull request #191 from samply/fix/oauth-redirect
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fix: Fix traefik label for oauth2 redirect
2024-07-03 15:10:28 +02:00
janskiba
9e4bc214ce
fix: Fix traefik label for oauth2 redirect
2024-07-03 13:01:02 +00:00
patrickskowronekdkfz
94a38155b5
Merge pull request #190 from samply/feature/obds-fhir
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feature: upgrade to oBDS2FHIR
2024-07-02 09:19:26 +02:00
Pierre Delpy
2ee8e0185a
feature: upgrade to oBDS2FHIR
2024-07-02 08:57:15 +02:00
Martin Lablans
f28e3c2cd2
Remove unnecessary default values
2024-07-01 15:19:44 +02:00
Martin Lablans
91ff51304b
Add new dashboard backend
2024-07-01 15:14:38 +02:00
Torben Brenner
e28b125b93
Merge pull request #189 from samply/fix/updateBlazeVersion
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fix: set blaze to version 0.28
2024-06-28 14:31:56 +02:00
Torben Brenner
f7751b9d92
fix: set blaze to version 0.28
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The 0.28 release is not downgradeable, therefore switching again to 0.28
2024-06-28 14:29:56 +02:00
Torben Brenner
4da71353cc
Merge pull request #188 from samply/fix/blazeDktkNotRunning
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Switch to old blaze Version
2024-06-28 13:59:20 +02:00
Torben Brenner
0db7df1440
Update docker-compose.yml
2024-06-28 13:57:30 +02:00
