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923 Commits

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Author SHA1 Message Date
Patrick Skowronek
ae95f14030 export ENVIRONMENT 2024-08-19 08:27:20 +02:00
Martin Lablans
25e1d4fb15 Merge pull request #202 from samply/main_fix_dirsync_passwd 
Fixed environment variable passing for Directory sync
 2024-08-15 13:43:39 +02:00
lablans
18c9e1bb30 Remove DP statement already present in readme. 2024-08-15 11:43:14 +00:00
lablans
de847f309c Provide defaults 2024-08-15 11:40:44 +00:00
DavidCroftDKFZ
3496fa7a0f Let Directory sync handle connection with Blaze 
Remove the delayed start, because Directory sync will automatically keep trying to
connect to Blaze if not initially present.
 2024-08-15 13:36:57 +02:00
DavidCroftDKFZ
95574f38be Included Blaze dependency 2024-08-15 10:33:28 +02:00
Jan
bff316cde1 Merge pull request #201 from samply/update/landing-page 
Added env to landing-page
 2024-08-15 10:00:09 +02:00
DavidCroftDKFZ
b8b81b1242 Fixed environment variable passing for Directory sync 
There were problems with the passing of environment variables from
bbmri.conf to the Directory synce container:

* The Directory password variable was misspellt.
* Some useful variables were missing.

Additionally, a delay was added before launching Directory sync,
to give Blaze time to start up.
 2024-08-15 09:17:34 +02:00
Patrick Skowronek
7c560a2e93 Added env to landing-page 2024-08-15 09:10:37 +02:00
Martin Lablans
4a13395408 Merge pull request #200 from samply/reduce-update-interval 
Reduce bridgehead update interval to once a day at 6am
 2024-08-05 08:29:15 +02:00
Tobias Kussel
35d6a17778 Fix bridgehead update timer time convention 
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
 2024-08-01 11:39:03 +02:00
Tobias Kussel
ecd9269022 Add bridgehead update timer persistance 
Co-authored-by: Martin Lablans <6804500+lablans@users.noreply.github.com>
 2024-08-01 11:38:25 +02:00
Tobias Kussel
5227dc57a7 Fix systemd timer description 
Co-authored-by: Jan <59206115+Threated@users.noreply.github.com>
 2024-08-01 11:32:15 +02:00
Tobias Kussel
62edaf99e0 Reduce bridgehead update interval to once a day at 6am 2024-08-01 11:23:56 +02:00
Tobias Kussel
9c941853bd Merge pull request #196 from samply/new-dashboard-backend 
Add new/additional dashboard backend
 2024-08-01 10:05:32 +02:00
Tobias Kussel
2e5aeabca8 Rename fhir2sql module files 2024-07-30 07:44:47 +00:00
Tobias Kussel
af44b6b446 Fix depends_on syntax 2024-07-30 07:40:49 +00:00
davidmscholz
5ed07423f3 fix dashboard-compose 2024-07-30 09:24:07 +02:00
davidmscholz
df08d67839 add optional dashboard module 2024-07-29 10:45:00 +02:00
Torben Brenner
964c5324e6 Merge pull request #160 from samply/main_directory_sync_extra_attributes_and_star_model 
Allow user to push star model facts to Directory
 2024-07-26 14:09:39 +02:00
Torben Brenner
023be58528 Merge pull request #195 from samply/feature/caching-ccp 
add caching in focus
 2024-07-26 14:07:15 +02:00
DavidCroftDKFZ
8942b923b3 Added comment for consistency with Directory Sync README 2024-07-26 09:57:40 +02:00
DavidCroftDKFZ
3f8bb158bc Merge branch 'main' into main_directory_sync_extra_attributes_and_star_model 2024-07-25 16:54:47 +02:00
Torben Brenner
c3b770b70f Merge pull request #194 from samply/workaround/secondary-cortex-blaze 
Workaround/secondary cortex blaze
 2024-07-25 10:32:38 +02:00
Pierre Delpy
d316f1c798 add caching in focus 2024-07-24 13:56:53 +02:00
djuarezgf
293810f254 Added: exporter with blaze-secondary 2024-07-18 14:06:47 +02:00
p.delpy@dkfz-heidelberg.de
6b4480c54b workaround: add second blaze 2024-07-18 14:06:47 +02:00
Tobias Kussel
a92b2eff76 Merge pull request #193 from samply/Fix-patientlisturl-in-obds2fhir-rest-compose.yml 
Fix patientlisturl in obds2fhir-rest-compose.yml
 2024-07-16 10:59:53 +02:00
Pierre Delpy
b36c9ae03e Fix patientlisturl in obds2fhir-rest-compose.yml 2024-07-16 10:49:23 +02:00
Torben Brenner
16629f3e45 Merge pull request #192 from samply/hotfix/idmanagementFlag 
fix: use correct ID management flag for oBDS2FHIR and MTBA
 2024-07-16 10:20:15 +02:00
Pierre Delpy
91dc31d039 fix: use correct ID management flag for oBDS2FHIR 2024-07-08 14:31:09 +02:00
patrickskowronekdkfz
7c54b6bb08 Merge pull request #191 from samply/fix/oauth-redirect 
fix: Fix traefik label for oauth2 redirect
 2024-07-03 15:10:28 +02:00
janskiba
9e4bc214ce fix: Fix traefik label for oauth2 redirect 2024-07-03 13:01:02 +00:00
patrickskowronekdkfz
94a38155b5 Merge pull request #190 from samply/feature/obds-fhir 
feature: upgrade to oBDS2FHIR
 2024-07-02 09:19:26 +02:00
Pierre Delpy
2ee8e0185a feature: upgrade to oBDS2FHIR 2024-07-02 08:57:15 +02:00
Martin Lablans
f28e3c2cd2 Remove unnecessary default values 2024-07-01 15:19:44 +02:00
Martin Lablans
91ff51304b Add new dashboard backend 2024-07-01 15:14:38 +02:00
Torben Brenner
e28b125b93 Merge pull request #189 from samply/fix/updateBlazeVersion 
fix: set blaze to version 0.28
 2024-06-28 14:31:56 +02:00
Torben Brenner
f7751b9d92 fix: set blaze to version 0.28 
The 0.28 release is not downgradeable, therefore switching again to 0.28
 2024-06-28 14:29:56 +02:00
Torben Brenner
4da71353cc Merge pull request #188 from samply/fix/blazeDktkNotRunning 
Switch to old blaze Version
 2024-06-28 13:59:20 +02:00
Torben Brenner
0db7df1440 Update docker-compose.yml 2024-06-28 13:57:30 +02:00
Enola Knezevic
373ba7a543 Merge pull request #187 from samply/feat/focus-retry 
feat: allow setting focus retry count and increase default
 2024-06-14 17:00:13 +02:00
janskiba
e72c996952 feat: allow setting focus retry count and increase default 2024-06-13 07:29:54 +00:00
Martin Lablans
4fc53c00bf Fix typo 2024-06-11 08:41:35 +02:00
patrickskowronekdkfz
647aa05c73 Merge pull request #186 from samply/feat/journal-logs 
feat: Add logs command for journalctl
 2024-06-05 14:58:35 +02:00
Jan
ec9df1feec Update README.md 
Co-authored-by: patrickskowronekdkfz <86347677+patrickskowronekdkfz@users.noreply.github.com>
 2024-06-05 14:57:42 +02:00
janskiba
a018104e0b feat: Add logs command for journalctl and rename old one to docker-logs 2024-06-05 12:35:44 +00:00
patrickskowronekdkfz
68f06c0d9d Merge pull request #185 from samply/update/focus_main 
switch focus of ccp to tag
 2024-05-21 16:21:22 +02:00
Patrick Skowronek
033da484d1 switch focus of ccp to tag 2024-05-21 16:16:40 +02:00
patrickskowronekdkfz
714e46f082 Merge pull request #184 from samply/refactor/mainzelliste-return-ssl 
Ensure Mainzelliste returns SSL in Responses
 2024-04-29 08:33:00 +02:00